RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 KRTAP3-3Q9BYR6 98 aa5.76□□□□□ -1.49
SPARC-207ENST00000537849 FAT4Q6V0I7 4981 aa5.75□□□□□ -1.49
SPARC-207ENST00000537849 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
SPARC-207ENST00000537849 LCA10Q71F78 164 aa5.73□□□□□ -1.49
SPARC-207ENST00000537849 S4R3F8 94 aa5.73□□□□□ -1.49
SPARC-207ENST00000537849 CHKB-CPT1BH3BT56 60 aa5.71□□□□□ -1.5
SPARC-207ENST00000537849 MT1HP80294 61 aa5.67□□□□□ -1.5
SPARC-207ENST00000537849 CSAG1Q6PB30 78 aa5.64□□□□□ -1.51
SPARC-207ENST00000537849 SPTSSBQ8NFR3 76 aa5.63□□□□□ -1.51
SPARC-207ENST00000537849 SMIM26A0A096LP01 95 aa5.6□□□□□ -1.51
SPARC-207ENST00000537849 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
SPARC-207ENST00000537849 LINC01558Q9Y6Z2 57 aa5.55□□□□□ -1.52
SPARC-207ENST00000537849 M0R2T5 61 aa5.54□□□□□ -1.52
SPARC-207ENST00000537849 Q1T7F1 81 aa5.54□□□□□ -1.52
SPARC-207ENST00000537849 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
SPARC-207ENST00000537849 H0YAA0 97 aa5.51□□□□□ -1.53
SPARC-207ENST00000537849 KRTAP10-6P60371 365 aaPredicted RBP5.49□□□□□ -1.53
SPARC-207ENST00000537849 V9GYY9 64 aa5.49□□□□□ -1.53
SPARC-207ENST00000537849 ADM2Q7Z4H4 148 aa5.48□□□□□ -1.53
SPARC-207ENST00000537849 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
SPARC-207ENST00000537849 P0C880 135 aa5.46□□□□□ -1.54
SPARC-207ENST00000537849 LORP23490 312 aaPredicted RBP5.46□□□□□ -1.54
SPARC-207ENST00000537849 A0A1B0GU69 56 aa5.45□□□□□ -1.54
SPARC-207ENST00000537849 SEC61GP60059 68 aa5.44□□□□□ -1.54
SPARC-207ENST00000537849 PRR15LQ9BU68 103 aa5.43□□□□□ -1.54
SPARC-207ENST00000537849 PSPHP1O15172 72 aa5.42□□□□□ -1.54
SPARC-207ENST00000537849 MT2AP02795 61 aa5.42□□□□□ -1.54
SPARC-207ENST00000537849 Q5VV11 94 aa5.4□□□□□ -1.54
SPARC-207ENST00000537849 MT1FP04733 61 aa5.38□□□□□ -1.55
SPARC-207ENST00000537849 A0A1B0GU33 70 aa5.36□□□□□ -1.55
SPARC-207ENST00000537849 KRTAP10-10P60014 251 aa5.35□□□□□ -1.55
SPARC-207ENST00000537849 KRTAP13-4Q3LI77 160 aa5.32□□□□□ -1.56
SPARC-207ENST00000537849 CRIPTQ9P021 101 aa5.31□□□□□ -1.56
SPARC-207ENST00000537849 M0QZ58 72 aa5.29□□□□□ -1.56
SPARC-207ENST00000537849 KRTAP9-3Q9BYQ3 159 aa5.28□□□□□ -1.56
SPARC-207ENST00000537849 UQCR11O14957 56 aa5.27□□□□□ -1.57
SPARC-207ENST00000537849 SPATA8Q6RVD6 105 aa5.27□□□□□ -1.57
SPARC-207ENST00000537849 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
SPARC-207ENST00000537849 SPRR2GQ9BYE4 73 aa5.26□□□□□ -1.57
SPARC-207ENST00000537849 R4GN34 69 aa5.26□□□□□ -1.57
SPARC-207ENST00000537849 A6NED7 52 aa5.23□□□□□ -1.57
SPARC-207ENST00000537849 KRTAP9-6A0A140TA67 174 aa5.21□□□□□ -1.58
SPARC-207ENST00000537849 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
SPARC-207ENST00000537849 A8MU10 97 aa5.19□□□□□ -1.58
SPARC-207ENST00000537849 KRTAP9-2Q9BYQ4 174 aa5.17□□□□□ -1.58
SPARC-207ENST00000537849 A0A0D9SG42 100 aa5.16□□□□□ -1.58
SPARC-207ENST00000537849 KRTAP19-8Q3LI54 63 aa5.16□□□□□ -1.58
SPARC-207ENST00000537849 LCE2BO14633 110 aa5.15□□□□□ -1.59
SPARC-207ENST00000537849 LINC01554Q52M75 96 aa5.15□□□□□ -1.59
SPARC-207ENST00000537849 CDC42SE1Q9NRR8 79 aa5.15□□□□□ -1.59
SPARC-207ENST00000537849 A6NN06 94 aa5.11□□□□□ -1.59
SPARC-207ENST00000537849 KRTAP12-1P59990 96 aa5.1□□□□□ -1.59
SPARC-207ENST00000537849 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
SPARC-207ENST00000537849 MT1BP07438 61 aa5.09□□□□□ -1.59
SPARC-207ENST00000537849 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
SPARC-207ENST00000537849 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
SPARC-207ENST00000537849 SPINT4Q6UDR6 99 aa5.04□□□□□ -1.6
SPARC-207ENST00000537849 USH2AO75445 5202 aa5.04□□□□□ -1.6
SPARC-207ENST00000537849 PLAC4Q8WY50 150 aa5.01□□□□□ -1.61
SPARC-207ENST00000537849 K7ERS5 55 aa4.95□□□□□ -1.62
SPARC-207ENST00000537849 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
SPARC-207ENST00000537849 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.63
SPARC-207ENST00000537849 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
SPARC-207ENST00000537849 MT1XP80297 61 aa4.89□□□□□ -1.63
SPARC-207ENST00000537849 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
SPARC-207ENST00000537849 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
SPARC-207ENST00000537849 C10orf95Q9H7T3 257 aa4.85□□□□□ -1.63
SPARC-207ENST00000537849 PMAIP1Q13794 54 aa4.81□□□□□ -1.64
SPARC-207ENST00000537849 CRCT1Q9UGL9 99 aa4.81□□□□□ -1.64
SPARC-207ENST00000537849 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
SPARC-207ENST00000537849 ROMO1P60602 79 aa4.78□□□□□ -1.64
SPARC-207ENST00000537849 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
SPARC-207ENST00000537849 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.65
SPARC-207ENST00000537849 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
SPARC-207ENST00000537849 TNP1P09430 55 aa4.67□□□□□ -1.66
SPARC-207ENST00000537849 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
SPARC-207ENST00000537849 KRTAP10-12P60413 245 aa4.64□□□□□ -1.67
SPARC-207ENST00000537849 KRTAP9-7A8MTY7 169 aa4.62□□□□□ -1.67
SPARC-207ENST00000537849 KTN1-AS1Q86SY8 53 aa4.56□□□□□ -1.68
SPARC-207ENST00000537849 KRTAP4-8A0A0G2JLE6 195 aa4.54□□□□□ -1.68
SPARC-207ENST00000537849 PRAC1Q96KF2 57 aa4.54□□□□□ -1.68
SPARC-207ENST00000537849 KRTAP4-8Q9BYQ9 185 aa4.54□□□□□ -1.68
SPARC-207ENST00000537849 KRTAP23-1A1A580 65 aa4.53□□□□□ -1.68
SPARC-207ENST00000537849 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
SPARC-207ENST00000537849 KMT2DO14686 5537 aa4.52□□□□□ -1.69
SPARC-207ENST00000537849 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.48□□□□□ -1.69
SPARC-207ENST00000537849 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
SPARC-207ENST00000537849 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
SPARC-207ENST00000537849 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
SPARC-207ENST00000537849 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
SPARC-207ENST00000537849 KRTAP19-7Q3SYF9 63 aa4.37□□□□□ -1.71
SPARC-207ENST00000537849 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
SPARC-207ENST00000537849 MT1EP04732 61 aa4.29□□□□□ -1.72
SPARC-207ENST00000537849 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
SPARC-207ENST00000537849 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
SPARC-207ENST00000537849 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
SPARC-207ENST00000537849 SPRR2FQ96RM1 72 aa4.26□□□□□ -1.73
SPARC-207ENST00000537849 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
SPARC-207ENST00000537849 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
SPARC-207ENST00000537849 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms