RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 CSAG1Q6PB30 78 aa8□□□□□ -1.13
GPN3-202ENST00000537466 OCR1Q9BZK8 76 aa8□□□□□ -1.13
GPN3-202ENST00000537466 LINC00208Q96KT6 92 aa7.96□□□□□ -1.13
GPN3-202ENST00000537466 FCGBPQ9Y6R7 5405 aaPredicted RBP7.94□□□□□ -1.14
GPN3-202ENST00000537466 FAM236AA0A1B0GUQ0 79 aa7.94□□□□□ -1.14
GPN3-202ENST00000537466 FAM236BA0A1B0GV22 79 aa7.94□□□□□ -1.14
GPN3-202ENST00000537466 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
GPN3-202ENST00000537466 MP68P56378 58 aa7.91□□□□□ -1.14
GPN3-202ENST00000537466 KRTAP19-6Q3LI70 58 aa7.87□□□□□ -1.15
GPN3-202ENST00000537466 PCP4P48539 62 aa7.85□□□□□ -1.15
GPN3-202ENST00000537466 A8MUN3 132 aa7.82□□□□□ -1.16
GPN3-202ENST00000537466 ANAPC13Q9BS18 74 aa7.82□□□□□ -1.16
GPN3-202ENST00000537466 H3BPC8 53 aa7.81□□□□□ -1.16
GPN3-202ENST00000537466 NDUFC1O43677 76 aa7.8□□□□□ -1.16
GPN3-202ENST00000537466 SPRR2GQ9BYE4 73 aa7.79□□□□□ -1.16
GPN3-202ENST00000537466 SMIM20Q8N5G0 67 aa7.77□□□□□ -1.17
GPN3-202ENST00000537466 MT1BP07438 61 aa7.74□□□□□ -1.17
GPN3-202ENST00000537466 KRTAP9-7A8MTY7 169 aa7.73□□□□□ -1.17
GPN3-202ENST00000537466 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
GPN3-202ENST00000537466 KRTAP19-8Q3LI54 63 aa7.72□□□□□ -1.17
GPN3-202ENST00000537466 H0YAA0 97 aa7.7□□□□□ -1.18
GPN3-202ENST00000537466 Q5VV11 94 aa7.7□□□□□ -1.18
GPN3-202ENST00000537466 MACF1Q9UPN3 7388 aaKnown RBP7.69□□□□□ -1.18
GPN3-202ENST00000537466 SERP2Q8N6R1 65 aa7.68□□□□□ -1.18
GPN3-202ENST00000537466 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
GPN3-202ENST00000537466 TRAV7A0A075B6U4 112 aa7.67□□□□□ -1.18
GPN3-202ENST00000537466 CRIPTQ9P021 101 aa7.67□□□□□ -1.18
GPN3-202ENST00000537466 COX7CP15954 63 aa7.66□□□□□ -1.18
GPN3-202ENST00000537466 ADM2Q7Z4H4 148 aa7.65□□□□□ -1.18
GPN3-202ENST00000537466 KRTAP4-8A0A0G2JLE6 195 aa7.63□□□□□ -1.19
GPN3-202ENST00000537466 SYNE2Q8WXH0 6885 aaKnown RBP7.6□□□□□ -1.19
GPN3-202ENST00000537466 KRTAP9-9Q9BYP9 154 aa7.57□□□□□ -1.2
GPN3-202ENST00000537466 KRTAP9-4Q9BYQ2 154 aa7.57□□□□□ -1.2
GPN3-202ENST00000537466 A6NN06 94 aa7.56□□□□□ -1.2
GPN3-202ENST00000537466 CCDC179H3BU77 68 aa7.55□□□□□ -1.2
GPN3-202ENST00000537466 SNURFQ9Y675 71 aa7.53□□□□□ -1.2
GPN3-202ENST00000537466 P0C880 135 aa7.51□□□□□ -1.21
GPN3-202ENST00000537466 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
GPN3-202ENST00000537466 ACYP2P14621 99 aa7.5□□□□□ -1.21
GPN3-202ENST00000537466 C20orf197Q8N268 126 aa7.5□□□□□ -1.21
GPN3-202ENST00000537466 KRTAP4-7Q9BYR0 210 aa7.43□□□□□ -1.22
GPN3-202ENST00000537466 R4GN34 69 aa7.43□□□□□ -1.22
GPN3-202ENST00000537466 KRTAP4-12Q9BQ66 201 aa7.41□□□□□ -1.22
GPN3-202ENST00000537466 TMEM258P61165 79 aa7.4□□□□□ -1.22
GPN3-202ENST00000537466 KRTAP6-3Q3LI67 103 aa7.39□□□□□ -1.23
GPN3-202ENST00000537466 M0QZ58 72 aa7.38□□□□□ -1.23
GPN3-202ENST00000537466 SPANXA2-OT1Q8N9U9 137 aa7.37□□□□□ -1.23
GPN3-202ENST00000537466 CHKB-CPT1BH3BT56 60 aa7.36□□□□□ -1.23
GPN3-202ENST00000537466 SPTSSBQ8NFR3 76 aa7.36□□□□□ -1.23
GPN3-202ENST00000537466 ATP5EP56381 51 aaPredicted RBP7.34□□□□□ -1.23
GPN3-202ENST00000537466 H7BZZ5 65 aa7.32□□□□□ -1.24
GPN3-202ENST00000537466 PLAC4Q8WY50 150 aa7.31□□□□□ -1.24
GPN3-202ENST00000537466 CYSTM1Q9H1C7 97 aa7.3□□□□□ -1.24
GPN3-202ENST00000537466 MT1XP80297 61 aa7.29□□□□□ -1.24
GPN3-202ENST00000537466 LINC01554Q52M75 96 aa7.28□□□□□ -1.24
GPN3-202ENST00000537466 PRO2289Q9P1D8 64 aa7.24□□□□□ -1.25
GPN3-202ENST00000537466 LCE1DQ5T752 114 aa7.19□□□□□ -1.26
GPN3-202ENST00000537466 COA5Q86WW8 74 aa7.18□□□□□ -1.26
GPN3-202ENST00000537466 SERP1Q9Y6X1 66 aa7.16□□□□□ -1.26
GPN3-202ENST00000537466 RPS28P62857 69 aaKnown RBP7.15□□□□□ -1.27
GPN3-202ENST00000537466 MUC12Q9UKN1 5478 aa7.12□□□□□ -1.27
GPN3-202ENST00000537466 KRTAP5-9P26371 169 aa7.12□□□□□ -1.27
GPN3-202ENST00000537466 KMT2DO14686 5537 aa7.12□□□□□ -1.27
GPN3-202ENST00000537466 KRTAP4-2Q9BYR5 136 aa7.11□□□□□ -1.27
GPN3-202ENST00000537466 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.27
GPN3-202ENST00000537466 NEBP20929 6669 aa7.09□□□□□ -1.27
GPN3-202ENST00000537466 KRTAP4-9Q9BYQ8 210 aa7.07□□□□□ -1.28
GPN3-202ENST00000537466 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
GPN3-202ENST00000537466 SMIM26A0A096LP01 95 aa6.98□□□□□ -1.29
GPN3-202ENST00000537466 KRTAP10-7P60409 375 aaPredicted RBP6.97□□□□□ -1.29
GPN3-202ENST00000537466 KRTAP5-3Q6L8H2 238 aa6.97□□□□□ -1.29
GPN3-202ENST00000537466 SEC61GP60059 68 aa6.96□□□□□ -1.3
GPN3-202ENST00000537466 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
GPN3-202ENST00000537466 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
GPN3-202ENST00000537466 MDN1Q9NU22 5596 aa6.93□□□□□ -1.3
GPN3-202ENST00000537466 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
GPN3-202ENST00000537466 V9GYY9 64 aa6.9□□□□□ -1.31
GPN3-202ENST00000537466 SPATA8Q6RVD6 105 aa6.88□□□□□ -1.31
GPN3-202ENST00000537466 A0A1B0GU33 70 aa6.86□□□□□ -1.31
GPN3-202ENST00000537466 A0A0D9SG42 100 aa6.85□□□□□ -1.31
GPN3-202ENST00000537466 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.31
GPN3-202ENST00000537466 SPRR2EP22531 72 aa6.81□□□□□ -1.32
GPN3-202ENST00000537466 SPRR2BP35325 72 aa6.81□□□□□ -1.32
GPN3-202ENST00000537466 SPRR2AP35326 72 aa6.81□□□□□ -1.32
GPN3-202ENST00000537466 Q1T7F1 81 aa6.8□□□□□ -1.32
GPN3-202ENST00000537466 A0A1B0GU69 56 aa6.79□□□□□ -1.32
GPN3-202ENST00000537466 KRTAP20-1Q3LI63 56 aa6.78□□□□□ -1.32
GPN3-202ENST00000537466 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
GPN3-202ENST00000537466 SPINT4Q6UDR6 99 aa6.74□□□□□ -1.33
GPN3-202ENST00000537466 KRTAP12-1P59990 96 aa6.73□□□□□ -1.33
GPN3-202ENST00000537466 PRR15LQ9BU68 103 aa6.73□□□□□ -1.33
GPN3-202ENST00000537466 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
GPN3-202ENST00000537466 KRTAP4-11Q9BYQ6 195 aa6.68□□□□□ -1.34
GPN3-202ENST00000537466 A8MU10 97 aa6.66□□□□□ -1.34
GPN3-202ENST00000537466 PSPHP1O15172 72 aa6.65□□□□□ -1.35
GPN3-202ENST00000537466 KRTAP2-3P0C7H8 128 aa6.63□□□□□ -1.35
GPN3-202ENST00000537466 KRTAP2-4Q9BYR9 128 aa6.63□□□□□ -1.35
GPN3-202ENST00000537466 SPRR2DP22532 72 aa6.58□□□□□ -1.36
GPN3-202ENST00000537466 A6NED7 52 aa6.52□□□□□ -1.37
GPN3-202ENST00000537466 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms