RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 KRTAP10-6P60371 365 aaPredicted RBP11.7□□□□□ -0.54
HMGA2-208ENST00000537429 LORP23490 312 aaPredicted RBP11.66□□□□□ -0.54
HMGA2-208ENST00000537429 KRTAP3-3Q9BYR6 98 aa11.65□□□□□ -0.55
HMGA2-208ENST00000537429 ACYP2P14621 99 aa11.64□□□□□ -0.55
HMGA2-208ENST00000537429 CSAG1Q6PB30 78 aa11.58□□□□□ -0.56
HMGA2-208ENST00000537429 KRTAP9-8Q9BYQ0 159 aa11.54□□□□□ -0.56
HMGA2-208ENST00000537429 MT2AP02795 61 aa11.43□□□□□ -0.58
HMGA2-208ENST00000537429 CHKB-CPT1BH3BT56 60 aa11.42□□□□□ -0.58
HMGA2-208ENST00000537429 PCP4P48539 62 aa11.4□□□□□ -0.59
HMGA2-208ENST00000537429 COA5Q86WW8 74 aa11.37□□□□□ -0.59
HMGA2-208ENST00000537429 ATP5EP56381 51 aaPredicted RBP11.36□□□□□ -0.59
HMGA2-208ENST00000537429 TMEM258P61165 79 aa11.36□□□□□ -0.59
HMGA2-208ENST00000537429 KRTAP10-10P60014 251 aa11.35□□□□□ -0.59
HMGA2-208ENST00000537429 MT1FP04733 61 aa11.35□□□□□ -0.59
HMGA2-208ENST00000537429 SPTSSBQ8NFR3 76 aa11.32□□□□□ -0.6
HMGA2-208ENST00000537429 H0YAA0 97 aa11.27□□□□□ -0.61
HMGA2-208ENST00000537429 ADM2Q7Z4H4 148 aa11.16□□□□□ -0.62
HMGA2-208ENST00000537429 KRTAP9-3Q9BYQ3 159 aa11.14□□□□□ -0.63
HMGA2-208ENST00000537429 LCE2DQ5TA82 110 aaPredicted RBP11.14□□□□□ -0.63
HMGA2-208ENST00000537429 KRTAP9-2Q9BYQ4 174 aa11.08□□□□□ -0.64
HMGA2-208ENST00000537429 KRTAP3-2Q9BYR7 98 aa11.08□□□□□ -0.64
HMGA2-208ENST00000537429 P0C880 135 aa11.04□□□□□ -0.64
HMGA2-208ENST00000537429 SERP1Q9Y6X1 66 aa11□□□□□ -0.65
HMGA2-208ENST00000537429 CRIPTQ9P021 101 aa10.99□□□□□ -0.65
HMGA2-208ENST00000537429 KRTAP19-1Q8IUB9 90 aa10.94□□□□□ -0.66
HMGA2-208ENST00000537429 LCE2BO14633 110 aa10.93□□□□□ -0.66
HMGA2-208ENST00000537429 SPRR2GQ9BYE4 73 aa10.93□□□□□ -0.66
HMGA2-208ENST00000537429 SEC61GP60059 68 aa10.87□□□□□ -0.67
HMGA2-208ENST00000537429 R4GN34 69 aa10.83□□□□□ -0.68
HMGA2-208ENST00000537429 M0QZ58 72 aa10.78□□□□□ -0.68
HMGA2-208ENST00000537429 A0A1B0GU69 56 aa10.77□□□□□ -0.69
HMGA2-208ENST00000537429 LINC01558Q9Y6Z2 57 aa10.76□□□□□ -0.69
HMGA2-208ENST00000537429 FSIP2Q5CZC0 6907 aa10.75□□□□□ -0.69
HMGA2-208ENST00000537429 USH2AO75445 5202 aa10.75□□□□□ -0.69
HMGA2-208ENST00000537429 SVIPQ8NHG7 77 aa10.74□□□□□ -0.69
HMGA2-208ENST00000537429 RPS28P62857 69 aaKnown RBP10.74□□□□□ -0.69
HMGA2-208ENST00000537429 KRTAP19-8Q3LI54 63 aa10.73□□□□□ -0.69
HMGA2-208ENST00000537429 Q5VV11 94 aa10.66□□□□□ -0.7
HMGA2-208ENST00000537429 PRR15LQ9BU68 103 aa10.64□□□□□ -0.71
HMGA2-208ENST00000537429 SMIM26A0A096LP01 95 aa10.63□□□□□ -0.71
HMGA2-208ENST00000537429 A0A1B0GU33 70 aa10.63□□□□□ -0.71
HMGA2-208ENST00000537429 MT1BP07438 61 aa10.63□□□□□ -0.71
HMGA2-208ENST00000537429 LINC01554Q52M75 96 aa10.63□□□□□ -0.71
HMGA2-208ENST00000537429 KRTAP13-4Q3LI77 160 aa10.62□□□□□ -0.71
HMGA2-208ENST00000537429 CRCT1Q9UGL9 99 aa10.59□□□□□ -0.71
HMGA2-208ENST00000537429 Q1T7F1 81 aa10.58□□□□□ -0.72
HMGA2-208ENST00000537429 V9GYY9 64 aa10.58□□□□□ -0.72
HMGA2-208ENST00000537429 SSPOA2VEC9 5147 aa10.5□□□□□ -0.73
HMGA2-208ENST00000537429 SPATA8Q6RVD6 105 aa10.49□□□□□ -0.73
HMGA2-208ENST00000537429 KRTAP9-6A0A140TA67 174 aa10.47□□□□□ -0.73
HMGA2-208ENST00000537429 PLAC4Q8WY50 150 aa10.44□□□□□ -0.74
HMGA2-208ENST00000537429 PSPHP1O15172 72 aa10.41□□□□□ -0.74
HMGA2-208ENST00000537429 KRTAP19-6Q3LI70 58 aa10.41□□□□□ -0.74
HMGA2-208ENST00000537429 A6NN06 94 aa10.39□□□□□ -0.75
HMGA2-208ENST00000537429 A0A0D9SG42 100 aa10.37□□□□□ -0.75
HMGA2-208ENST00000537429 UQCR11O14957 56 aa10.34□□□□□ -0.75
HMGA2-208ENST00000537429 A8MU10 97 aa10.26□□□□□ -0.77
HMGA2-208ENST00000537429 KRTAP10-5P60370 271 aa10.22□□□□□ -0.77
HMGA2-208ENST00000537429 KRTAP12-1P59990 96 aa10.18□□□□□ -0.78
HMGA2-208ENST00000537429 FCGBPQ9Y6R7 5405 aaPredicted RBP10.18□□□□□ -0.78
HMGA2-208ENST00000537429 MIR22HGQ0VDD5 57 aa10.17□□□□□ -0.78
HMGA2-208ENST00000537429 SPINT4Q6UDR6 99 aa10.17□□□□□ -0.78
HMGA2-208ENST00000537429 MT1XP80297 61 aa10.15□□□□□ -0.78
HMGA2-208ENST00000537429 PRO2289Q9P1D8 64 aa10.13□□□□□ -0.79
HMGA2-208ENST00000537429 KRTAP12-2P59991 146 aa10.12□□□□□ -0.79
HMGA2-208ENST00000537429 A6NED7 52 aa10.09□□□□□ -0.79
HMGA2-208ENST00000537429 CAMK2N1Q7Z7J9 78 aa10.09□□□□□ -0.79
HMGA2-208ENST00000537429 CDC42SE1Q9NRR8 79 aa9.84□□□□□ -0.83
HMGA2-208ENST00000537429 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.82□□□□□ -0.84
HMGA2-208ENST00000537429 K7ERS5 55 aa9.81□□□□□ -0.84
HMGA2-208ENST00000537429 MACF1Q9UPN3 7388 aaKnown RBP9.79□□□□□ -0.84
HMGA2-208ENST00000537429 KRTAP10-7P60409 375 aaPredicted RBP9.7□□□□□ -0.86
HMGA2-208ENST00000537429 C10orf95Q9H7T3 257 aa9.66□□□□□ -0.86
HMGA2-208ENST00000537429 KRTAP10-12P60413 245 aa9.65□□□□□ -0.86
HMGA2-208ENST00000537429 SYNE2Q8WXH0 6885 aaKnown RBP9.57□□□□□ -0.88
HMGA2-208ENST00000537429 BRK1Q8WUW1 75 aa9.53□□□□□ -0.88
HMGA2-208ENST00000537429 KMT2DO14686 5537 aa9.53□□□□□ -0.88
HMGA2-208ENST00000537429 KRTAP9-7A8MTY7 169 aa9.5□□□□□ -0.89
HMGA2-208ENST00000537429 KRTAP4-8A0A0G2JLE6 195 aa9.48□□□□□ -0.89
HMGA2-208ENST00000537429 KRTAP4-8Q9BYQ9 185 aa9.48□□□□□ -0.89
HMGA2-208ENST00000537429 TNP1P09430 55 aa9.47□□□□□ -0.89
HMGA2-208ENST00000537429 KRTAP8-1Q8IUC2 63 aa9.41□□□□□ -0.9
HMGA2-208ENST00000537429 KRTAP6-3Q3LI67 103 aa9.4□□□□□ -0.91
HMGA2-208ENST00000537429 ROMO1P60602 79 aa9.31□□□□□ -0.92
HMGA2-208ENST00000537429 KRTAP25-1Q3LHN0 102 aa9.31□□□□□ -0.92
HMGA2-208ENST00000537429 KRTAP5-9P26371 169 aa9.28□□□□□ -0.92
HMGA2-208ENST00000537429 SPRR2FQ96RM1 72 aa9.21□□□□□ -0.93
HMGA2-208ENST00000537429 LCE3AQ5TA76 89 aa9.19□□□□□ -0.94
HMGA2-208ENST00000537429 MUC12Q9UKN1 5478 aa9.07□□□□□ -0.96
HMGA2-208ENST00000537429 KRTAP19-7Q3SYF9 63 aa9.06□□□□□ -0.96
HMGA2-208ENST00000537429 KRTAP23-1A1A580 65 aa9.02□□□□□ -0.97
HMGA2-208ENST00000537429 PRO0628Q9UI54 55 aa9.02□□□□□ -0.97
HMGA2-208ENST00000537429 KRTAP19-5Q3LI72 72 aa9.01□□□□□ -0.97
HMGA2-208ENST00000537429 PMAIP1Q13794 54 aa9□□□□□ -0.97
HMGA2-208ENST00000537429 MDN1Q9NU22 5596 aa8.94□□□□□ -0.98
HMGA2-208ENST00000537429 MT1EP04732 61 aa8.94□□□□□ -0.98
HMGA2-208ENST00000537429 SPRR2EP22531 72 aa8.91□□□□□ -0.98
HMGA2-208ENST00000537429 SPRR2BP35325 72 aa8.91□□□□□ -0.98
HMGA2-208ENST00000537429 SPRR2AP35326 72 aa8.91□□□□□ -0.98
HMGA2-208ENST00000537429 NEBP20929 6669 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms