RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 PKHD1P08F94 4074 aa6.34□□□□□ -1.39
PTCD2-211ENST00000536805 SMR3BP02814 79 aaPredicted RBP6.34□□□□□ -1.39
PTCD2-211ENST00000536805 DYNC1H1Q14204 4646 aaKnown RBP6.32□□□□□ -1.4
PTCD2-211ENST00000536805 H3BS24 57 aa6.31□□□□□ -1.4
PTCD2-211ENST00000536805 ROMO1P60602 79 aa6.31□□□□□ -1.4
PTCD2-211ENST00000536805 A0A1B0GVY2 172 aa6.26□□□□□ -1.41
PTCD2-211ENST00000536805 KRTAP10-6P60371 365 aaPredicted RBP6.26□□□□□ -1.41
PTCD2-211ENST00000536805 RPL37P61927 97 aaKnown RBP6.26□□□□□ -1.41
PTCD2-211ENST00000536805 FAT1Q14517 4588 aa6.21□□□□□ -1.42
PTCD2-211ENST00000536805 FLG2Q5D862 2391 aaPredicted RBP6.2□□□□□ -1.42
PTCD2-211ENST00000536805 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
PTCD2-211ENST00000536805 CRIPTQ9P021 101 aa6.2□□□□□ -1.42
PTCD2-211ENST00000536805 S4R3F8 94 aa6.18□□□□□ -1.42
PTCD2-211ENST00000536805 FAT3Q8TDW7 4589 aa6.17□□□□□ -1.42
PTCD2-211ENST00000536805 UBR4Q5T4S7 5183 aa6.16□□□□□ -1.42
PTCD2-211ENST00000536805 TNXBP22105 4242 aa6.15□□□□□ -1.43
PTCD2-211ENST00000536805 KIAA1109Q2LD37 5005 aa6.14□□□□□ -1.43
PTCD2-211ENST00000536805 ABCA13Q86UQ4 5058 aa6.14□□□□□ -1.43
PTCD2-211ENST00000536805 A0A0D9SG42 100 aa6.13□□□□□ -1.43
PTCD2-211ENST00000536805 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
PTCD2-211ENST00000536805 XP32Q5T750 250 aa6.11□□□□□ -1.43
PTCD2-211ENST00000536805 LRP1Q07954 4544 aaKnown RBP6.1□□□□□ -1.43
PTCD2-211ENST00000536805 TPRXLQ17RH7 258 aa6.1□□□□□ -1.43
PTCD2-211ENST00000536805 P0C880 135 aa6.09□□□□□ -1.44
PTCD2-211ENST00000536805 HSPG2P98160 4391 aa6.07□□□□□ -1.44
PTCD2-211ENST00000536805 DMBT1Q9UGM3 2413 aaPredicted RBP6.04□□□□□ -1.44
PTCD2-211ENST00000536805 HERC1Q15751 4861 aa6.04□□□□□ -1.44
PTCD2-211ENST00000536805 SPINT4Q6UDR6 99 aa6.02□□□□□ -1.45
PTCD2-211ENST00000536805 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
PTCD2-211ENST00000536805 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
PTCD2-211ENST00000536805 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
PTCD2-211ENST00000536805 Q5VSD8 79 aa5.97□□□□□ -1.45
PTCD2-211ENST00000536805 M0QZ58 72 aa5.95□□□□□ -1.46
PTCD2-211ENST00000536805 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
PTCD2-211ENST00000536805 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
PTCD2-211ENST00000536805 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
PTCD2-211ENST00000536805 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
PTCD2-211ENST00000536805 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
PTCD2-211ENST00000536805 MYCBP2O75592 4640 aa5.85□□□□□ -1.47
PTCD2-211ENST00000536805 NDUFAF8A1L188 74 aa5.8□□□□□ -1.48
PTCD2-211ENST00000536805 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
PTCD2-211ENST00000536805 R4GN34 69 aa5.72□□□□□ -1.49
PTCD2-211ENST00000536805 LPAP08519 4548 aa5.71□□□□□ -1.5
PTCD2-211ENST00000536805 LRP2P98164 4655 aa5.68□□□□□ -1.5
PTCD2-211ENST00000536805 LCE2BO14633 110 aa5.64□□□□□ -1.51
PTCD2-211ENST00000536805 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
PTCD2-211ENST00000536805 HMCN2Q8NDA2 5059 aa5.64□□□□□ -1.51
PTCD2-211ENST00000536805 SEC61BP60468 96 aaKnown RBP5.6□□□□□ -1.51
PTCD2-211ENST00000536805 PLAC4Q8WY50 150 aa5.58□□□□□ -1.52
PTCD2-211ENST00000536805 LORP23490 312 aaPredicted RBP5.57□□□□□ -1.52
PTCD2-211ENST00000536805 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
PTCD2-211ENST00000536805 MUC17Q685J3 4493 aa5.54□□□□□ -1.52
PTCD2-211ENST00000536805 J3QL48 77 aa5.52□□□□□ -1.53
PTCD2-211ENST00000536805 RNF213Q63HN8 5207 aa5.49□□□□□ -1.53
PTCD2-211ENST00000536805 KRTAP4-1Q9BYQ7 146 aa5.47□□□□□ -1.53
PTCD2-211ENST00000536805 KRTAP19-2Q3LHN2 52 aa5.45□□□□□ -1.54
PTCD2-211ENST00000536805 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
PTCD2-211ENST00000536805 FAT4Q6V0I7 4981 aa5.39□□□□□ -1.55
PTCD2-211ENST00000536805 LUZP6Q538Z0 58 aa5.38□□□□□ -1.55
PTCD2-211ENST00000536805 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
PTCD2-211ENST00000536805 MUC2Q02817 5179 aa5.35□□□□□ -1.55
PTCD2-211ENST00000536805 TNP1P09430 55 aa5.3□□□□□ -1.56
PTCD2-211ENST00000536805 FLGP20930 4061 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-211ENST00000536805 LCE2CQ5TA81 110 aa5.27□□□□□ -1.57
PTCD2-211ENST00000536805 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
PTCD2-211ENST00000536805 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
PTCD2-211ENST00000536805 CRCT1Q9UGL9 99 aa5.23□□□□□ -1.57
PTCD2-211ENST00000536805 LCE2AQ5TA79 106 aaPredicted RBP5.22□□□□□ -1.57
PTCD2-211ENST00000536805 SPRR2GQ9BYE4 73 aa5.11□□□□□ -1.59
PTCD2-211ENST00000536805 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
PTCD2-211ENST00000536805 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
PTCD2-211ENST00000536805 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
PTCD2-211ENST00000536805 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
PTCD2-211ENST00000536805 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
PTCD2-211ENST00000536805 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
PTCD2-211ENST00000536805 KRTAP8-1Q8IUC2 63 aa4.89□□□□□ -1.63
PTCD2-211ENST00000536805 M0R2T5 61 aa4.88□□□□□ -1.63
PTCD2-211ENST00000536805 MT1HP80294 61 aa4.87□□□□□ -1.63
PTCD2-211ENST00000536805 MT2AP02795 61 aa4.86□□□□□ -1.63
PTCD2-211ENST00000536805 KRTAP19-8Q3LI54 63 aa4.86□□□□□ -1.63
PTCD2-211ENST00000536805 MT1FP04733 61 aa4.85□□□□□ -1.63
PTCD2-211ENST00000536805 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
PTCD2-211ENST00000536805 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.64
PTCD2-211ENST00000536805 KRTAP10-10P60014 251 aa4.84□□□□□ -1.64
PTCD2-211ENST00000536805 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
PTCD2-211ENST00000536805 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
PTCD2-211ENST00000536805 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
PTCD2-211ENST00000536805 MT1XP80297 61 aa4.76□□□□□ -1.65
PTCD2-211ENST00000536805 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
PTCD2-211ENST00000536805 INE1O15225 51 aa4.76□□□□□ -1.65
PTCD2-211ENST00000536805 MT1BP07438 61 aa4.76□□□□□ -1.65
PTCD2-211ENST00000536805 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
PTCD2-211ENST00000536805 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
PTCD2-211ENST00000536805 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
PTCD2-211ENST00000536805 SSPOA2VEC9 5147 aa4.67□□□□□ -1.66
PTCD2-211ENST00000536805 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
PTCD2-211ENST00000536805 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
PTCD2-211ENST00000536805 KRTAP10-7P60409 375 aaPredicted RBP4.62□□□□□ -1.67
PTCD2-211ENST00000536805 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
PTCD2-211ENST00000536805 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms