RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 KRTAP13-4Q3LI77 160 aa7.51□□□□□ -1.21
CDH20-202ENST00000536675 RPL37P61927 97 aaKnown RBP7.51□□□□□ -1.21
CDH20-202ENST00000536675 A0A0D9SG42 100 aa7.48□□□□□ -1.21
CDH20-202ENST00000536675 KRTAP10-4P60372 401 aaPredicted RBP7.48□□□□□ -1.21
CDH20-202ENST00000536675 TPRXLQ17RH7 258 aa7.45□□□□□ -1.22
CDH20-202ENST00000536675 DMBT1Q9UGM3 2413 aaPredicted RBP7.45□□□□□ -1.22
CDH20-202ENST00000536675 FAT3Q8TDW7 4589 aa7.43□□□□□ -1.22
CDH20-202ENST00000536675 HSPG2P98160 4391 aa7.42□□□□□ -1.22
CDH20-202ENST00000536675 KRTAP21-3Q3LHN1 58 aa7.39□□□□□ -1.23
CDH20-202ENST00000536675 SPINT4Q6UDR6 99 aa7.37□□□□□ -1.23
CDH20-202ENST00000536675 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
CDH20-202ENST00000536675 LRP1Q07954 4544 aaKnown RBP7.36□□□□□ -1.23
CDH20-202ENST00000536675 S4R3F8 94 aa7.35□□□□□ -1.23
CDH20-202ENST00000536675 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
CDH20-202ENST00000536675 TNXBP22105 4242 aa7.34□□□□□ -1.23
CDH20-202ENST00000536675 A0A1B0GVY2 172 aa7.3□□□□□ -1.24
CDH20-202ENST00000536675 KRTAP12-2P59991 146 aa7.29□□□□□ -1.24
CDH20-202ENST00000536675 MYCBP2O75592 4640 aa7.25□□□□□ -1.25
CDH20-202ENST00000536675 KRTAP15-1Q3LI76 137 aa7.24□□□□□ -1.25
CDH20-202ENST00000536675 XP32Q5T750 250 aa7.23□□□□□ -1.25
CDH20-202ENST00000536675 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
CDH20-202ENST00000536675 NDUFAF8A1L188 74 aa7.17□□□□□ -1.26
CDH20-202ENST00000536675 RYR2Q92736 4967 aa7.1□□□□□ -1.27
CDH20-202ENST00000536675 LPAP08519 4548 aa7.1□□□□□ -1.27
CDH20-202ENST00000536675 KMT2CQ8NEZ4 4911 aaKnown RBP7.08□□□□□ -1.28
CDH20-202ENST00000536675 M0QZ58 72 aa7.05□□□□□ -1.28
CDH20-202ENST00000536675 Q5VSD8 79 aa7.01□□□□□ -1.29
CDH20-202ENST00000536675 LRP2P98164 4655 aa6.98□□□□□ -1.29
CDH20-202ENST00000536675 LCE2BO14633 110 aa6.94□□□□□ -1.3
CDH20-202ENST00000536675 RYR3Q15413 4870 aa6.93□□□□□ -1.3
CDH20-202ENST00000536675 KRTAP17-1Q9BYP8 105 aa6.9□□□□□ -1.31
CDH20-202ENST00000536675 RYR1P21817 5038 aa6.89□□□□□ -1.31
CDH20-202ENST00000536675 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
CDH20-202ENST00000536675 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
CDH20-202ENST00000536675 R4GN34 69 aa6.83□□□□□ -1.32
CDH20-202ENST00000536675 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
CDH20-202ENST00000536675 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
CDH20-202ENST00000536675 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
CDH20-202ENST00000536675 KIAA1109Q2LD37 5005 aa6.74□□□□□ -1.33
CDH20-202ENST00000536675 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
CDH20-202ENST00000536675 EPPK1P58107 5090 aaKnown RBP6.7□□□□□ -1.34
CDH20-202ENST00000536675 MUC17Q685J3 4493 aa6.7□□□□□ -1.34
CDH20-202ENST00000536675 ABCA13Q86UQ4 5058 aa6.67□□□□□ -1.34
CDH20-202ENST00000536675 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
CDH20-202ENST00000536675 KRTAP4-1Q9BYQ7 146 aa6.54□□□□□ -1.36
CDH20-202ENST00000536675 SEC61BP60468 96 aaKnown RBP6.53□□□□□ -1.36
CDH20-202ENST00000536675 CAMK2N1Q7Z7J9 78 aa6.53□□□□□ -1.36
CDH20-202ENST00000536675 LUZP6Q538Z0 58 aa6.51□□□□□ -1.37
CDH20-202ENST00000536675 KRTAP19-2Q3LHN2 52 aa6.45□□□□□ -1.38
CDH20-202ENST00000536675 KRTAP4-5Q9BYR2 181 aa6.41□□□□□ -1.38
CDH20-202ENST00000536675 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
CDH20-202ENST00000536675 TNP1P09430 55 aa6.31□□□□□ -1.4
CDH20-202ENST00000536675 BIRC6Q9NR09 4857 aa6.29□□□□□ -1.4
CDH20-202ENST00000536675 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
CDH20-202ENST00000536675 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
CDH20-202ENST00000536675 MUC2Q02817 5179 aa6.26□□□□□ -1.41
CDH20-202ENST00000536675 HERC1Q15751 4861 aa6.25□□□□□ -1.41
CDH20-202ENST00000536675 HERC2O95714 4834 aa6.23□□□□□ -1.41
CDH20-202ENST00000536675 PCLOQ9Y6V0 5065 aa6.15□□□□□ -1.43
CDH20-202ENST00000536675 SPRR2GQ9BYE4 73 aa6□□□□□ -1.45
CDH20-202ENST00000536675 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
CDH20-202ENST00000536675 KRTAP19-1Q8IUB9 90 aa5.98□□□□□ -1.45
CDH20-202ENST00000536675 FAT4Q6V0I7 4981 aa5.95□□□□□ -1.46
CDH20-202ENST00000536675 HMCN2Q8NDA2 5059 aa5.83□□□□□ -1.48
CDH20-202ENST00000536675 KRTAP8-1Q8IUC2 63 aa5.8□□□□□ -1.48
CDH20-202ENST00000536675 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
CDH20-202ENST00000536675 M0R2T5 61 aa5.79□□□□□ -1.48
CDH20-202ENST00000536675 UBR4Q5T4S7 5183 aa5.76□□□□□ -1.49
CDH20-202ENST00000536675 MT1FP04733 61 aa5.76□□□□□ -1.49
CDH20-202ENST00000536675 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
CDH20-202ENST00000536675 MT1HP80294 61 aa5.73□□□□□ -1.49
CDH20-202ENST00000536675 MT2AP02795 61 aa5.73□□□□□ -1.49
CDH20-202ENST00000536675 INE1O15225 51 aa5.71□□□□□ -1.5
CDH20-202ENST00000536675 RNF213Q63HN8 5207 aa5.69□□□□□ -1.5
CDH20-202ENST00000536675 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
CDH20-202ENST00000536675 KRTAP19-8Q3LI54 63 aa5.68□□□□□ -1.5
CDH20-202ENST00000536675 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
CDH20-202ENST00000536675 MT1XP80297 61 aa5.66□□□□□ -1.5
CDH20-202ENST00000536675 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
CDH20-202ENST00000536675 MT1BP07438 61 aa5.62□□□□□ -1.51
CDH20-202ENST00000536675 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
CDH20-202ENST00000536675 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
CDH20-202ENST00000536675 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.55
CDH20-202ENST00000536675 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
CDH20-202ENST00000536675 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
CDH20-202ENST00000536675 KMT2DO14686 5537 aa5.25□□□□□ -1.57
CDH20-202ENST00000536675 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
CDH20-202ENST00000536675 KRTAP4-8A0A0G2JLE6 195 aa5.14□□□□□ -1.59
CDH20-202ENST00000536675 KRTAP4-8Q9BYQ9 185 aa5.14□□□□□ -1.59
CDH20-202ENST00000536675 USH2AO75445 5202 aa5.13□□□□□ -1.59
CDH20-202ENST00000536675 KRTAP2-3P0C7H8 128 aa5.11□□□□□ -1.59
CDH20-202ENST00000536675 KRTAP2-4Q9BYR9 128 aa5.11□□□□□ -1.59
CDH20-202ENST00000536675 KRTAP2-1Q9BYU5 128 aa5.11□□□□□ -1.59
CDH20-202ENST00000536675 KRTAP4-7Q9BYR0 210 aa5.07□□□□□ -1.6
CDH20-202ENST00000536675 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
CDH20-202ENST00000536675 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
CDH20-202ENST00000536675 MT1LQ93083 61 aa4.9□□□□□ -1.62
CDH20-202ENST00000536675 MT1EP04732 61 aa4.86□□□□□ -1.63
CDH20-202ENST00000536675 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.63
CDH20-202ENST00000536675 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms