RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 A8MUU9 505 aa11.72□□□□□ -0.53
TRIM3-214ENST00000536344 KRTAP25-1Q3LHN0 102 aa11.71□□□□□ -0.53
TRIM3-214ENST00000536344 FAT3Q8TDW7 4589 aa11.71□□□□□ -0.54
TRIM3-214ENST00000536344 ROMO1P60602 79 aa11.68□□□□□ -0.54
TRIM3-214ENST00000536344 RPS29P62273 56 aaKnown RBP11.62□□□□□ -0.55
TRIM3-214ENST00000536344 KRTAP10-8P60410 259 aa11.58□□□□□ -0.56
TRIM3-214ENST00000536344 KRTAP4-5Q9BYR2 181 aa11.56□□□□□ -0.56
TRIM3-214ENST00000536344 P0C880 135 aa11.49□□□□□ -0.57
TRIM3-214ENST00000536344 A0A1B0GU33 70 aa11.49□□□□□ -0.57
TRIM3-214ENST00000536344 ABCA13Q86UQ4 5058 aa11.47□□□□□ -0.57
TRIM3-214ENST00000536344 MT1HL1P0DM35 61 aa11.44□□□□□ -0.58
TRIM3-214ENST00000536344 H1FX-AS1Q4G0G2 97 aa11.39□□□□□ -0.59
TRIM3-214ENST00000536344 KRTAP3-1Q9BYR8 98 aa11.37□□□□□ -0.59
TRIM3-214ENST00000536344 C20orf166-AS1Q96NR2 134 aa11.33□□□□□ -0.6
TRIM3-214ENST00000536344 HERC2O95714 4834 aa11.31□□□□□ -0.6
TRIM3-214ENST00000536344 LPAP08519 4548 aa11.3□□□□□ -0.6
TRIM3-214ENST00000536344 LRP2P98164 4655 aa11.24□□□□□ -0.61
TRIM3-214ENST00000536344 COX6B2Q6YFQ2 88 aa11.22□□□□□ -0.61
TRIM3-214ENST00000536344 BIRC6Q9NR09 4857 aa11.2□□□□□ -0.62
TRIM3-214ENST00000536344 XP32Q5T750 250 aa11.17□□□□□ -0.62
TRIM3-214ENST00000536344 K7ERS5 55 aa11.15□□□□□ -0.62
TRIM3-214ENST00000536344 TPRXLQ17RH7 258 aa11.13□□□□□ -0.63
TRIM3-214ENST00000536344 SPINT4Q6UDR6 99 aa11.12□□□□□ -0.63
TRIM3-214ENST00000536344 C10orf95Q9H7T3 257 aa11.1□□□□□ -0.63
TRIM3-214ENST00000536344 A0A0D9SG42 100 aa11.06□□□□□ -0.64
TRIM3-214ENST00000536344 RPL37P61927 97 aaKnown RBP11.06□□□□□ -0.64
TRIM3-214ENST00000536344 J3QL48 77 aa11.03□□□□□ -0.64
TRIM3-214ENST00000536344 KRTAP13-4Q3LI77 160 aa11.03□□□□□ -0.64
TRIM3-214ENST00000536344 PCLOQ9Y6V0 5065 aa11.02□□□□□ -0.64
TRIM3-214ENST00000536344 NDUFAF8A1L188 74 aa11□□□□□ -0.65
TRIM3-214ENST00000536344 HERC1Q15751 4861 aa10.94□□□□□ -0.66
TRIM3-214ENST00000536344 KRTAP10-6P60371 365 aaPredicted RBP10.93□□□□□ -0.66
TRIM3-214ENST00000536344 KRTAP15-1Q3LI76 137 aa10.87□□□□□ -0.67
TRIM3-214ENST00000536344 KRTAP3-3Q9BYR6 98 aa10.8□□□□□ -0.68
TRIM3-214ENST00000536344 KRTAP3-2Q9BYR7 98 aa10.78□□□□□ -0.68
TRIM3-214ENST00000536344 MUC2Q02817 5179 aa10.77□□□□□ -0.68
TRIM3-214ENST00000536344 KRTAP12-2P59991 146 aa10.7□□□□□ -0.7
TRIM3-214ENST00000536344 S4R3F8 94 aa10.66□□□□□ -0.7
TRIM3-214ENST00000536344 MUC17Q685J3 4493 aa10.58□□□□□ -0.72
TRIM3-214ENST00000536344 KRTAP4-1Q9BYQ7 146 aa10.57□□□□□ -0.72
TRIM3-214ENST00000536344 HMCN2Q8NDA2 5059 aa10.56□□□□□ -0.72
TRIM3-214ENST00000536344 SEC61BP60468 96 aaKnown RBP10.51□□□□□ -0.73
TRIM3-214ENST00000536344 KRTAP12-1P59990 96 aa10.49□□□□□ -0.73
TRIM3-214ENST00000536344 RNF213Q63HN8 5207 aa10.37□□□□□ -0.75
TRIM3-214ENST00000536344 UBR4Q5T4S7 5183 aa10.34□□□□□ -0.75
TRIM3-214ENST00000536344 A0A0A0MQY5 61 aa10.29□□□□□ -0.76
TRIM3-214ENST00000536344 FAT4Q6V0I7 4981 aa10.26□□□□□ -0.77
TRIM3-214ENST00000536344 KRTAP19-2Q3LHN2 52 aa10.15□□□□□ -0.78
TRIM3-214ENST00000536344 PLAC4Q8WY50 150 aa10.06□□□□□ -0.8
TRIM3-214ENST00000536344 LUZP6Q538Z0 58 aa10.06□□□□□ -0.8
TRIM3-214ENST00000536344 FLGP20930 4061 aaPredicted RBP10.05□□□□□ -0.8
TRIM3-214ENST00000536344 M0QZ58 72 aa10.04□□□□□ -0.8
TRIM3-214ENST00000536344 LORP23490 312 aaPredicted RBP9.92□□□□□ -0.82
TRIM3-214ENST00000536344 LCE2CQ5TA81 110 aa9.84□□□□□ -0.83
TRIM3-214ENST00000536344 R4GN34 69 aa9.83□□□□□ -0.84
TRIM3-214ENST00000536344 M0R2T5 61 aa9.72□□□□□ -0.85
TRIM3-214ENST00000536344 MT1HP80294 61 aa9.63□□□□□ -0.87
TRIM3-214ENST00000536344 CAMK2N1Q7Z7J9 78 aa9.43□□□□□ -0.9
TRIM3-214ENST00000536344 PP632Q6XCG6 107 aa9.4□□□□□ -0.9
TRIM3-214ENST00000536344 KRTAP10-10P60014 251 aa9.34□□□□□ -0.91
TRIM3-214ENST00000536344 MT1FP04733 61 aa9.34□□□□□ -0.91
TRIM3-214ENST00000536344 MT2AP02795 61 aa9.33□□□□□ -0.92
TRIM3-214ENST00000536344 KRTAP9-8Q9BYQ0 159 aa9.31□□□□□ -0.92
TRIM3-214ENST00000536344 KRTAP19-1Q8IUB9 90 aa9.24□□□□□ -0.93
TRIM3-214ENST00000536344 SPRR5A0A1B0GTR4 108 aa9.15□□□□□ -0.95
TRIM3-214ENST00000536344 SPRR2GQ9BYE4 73 aa9.14□□□□□ -0.95
TRIM3-214ENST00000536344 TNP1P09430 55 aa9.06□□□□□ -0.96
TRIM3-214ENST00000536344 USH2AO75445 5202 aa9.01□□□□□ -0.97
TRIM3-214ENST00000536344 LCE2AQ5TA79 106 aaPredicted RBP8.95□□□□□ -0.98
TRIM3-214ENST00000536344 KRTAP9-3Q9BYQ3 159 aa8.93□□□□□ -0.98
TRIM3-214ENST00000536344 MT1BP07438 61 aa8.84□□□□□ -0.99
TRIM3-214ENST00000536344 KRTAP23-1A1A580 65 aa8.82□□□□□ -1
TRIM3-214ENST00000536344 KRTAP19-8Q3LI54 63 aa8.81□□□□□ -1
TRIM3-214ENST00000536344 PRO2289Q9P1D8 64 aa8.77□□□□□ -1.01
TRIM3-214ENST00000536344 LCE2BO14633 110 aa8.75□□□□□ -1.01
TRIM3-214ENST00000536344 FSIP2Q5CZC0 6907 aa8.72□□□□□ -1.01
TRIM3-214ENST00000536344 LCE3AQ5TA76 89 aa8.67□□□□□ -1.02
TRIM3-214ENST00000536344 MT1XP80297 61 aa8.64□□□□□ -1.03
TRIM3-214ENST00000536344 KRTAP10-5P60370 271 aa8.63□□□□□ -1.03
TRIM3-214ENST00000536344 KMT2DO14686 5537 aa8.51□□□□□ -1.05
TRIM3-214ENST00000536344 INE1O15225 51 aa8.46□□□□□ -1.05
TRIM3-214ENST00000536344 KRTAP10-7P60409 375 aaPredicted RBP8.43□□□□□ -1.06
TRIM3-214ENST00000536344 SSPOA2VEC9 5147 aa8.4□□□□□ -1.06
TRIM3-214ENST00000536344 KRTAP8-1Q8IUC2 63 aa8.27□□□□□ -1.09
TRIM3-214ENST00000536344 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
TRIM3-214ENST00000536344 KRTAP4-8A0A0G2JLE6 195 aa8.14□□□□□ -1.11
TRIM3-214ENST00000536344 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
TRIM3-214ENST00000536344 KRTAP12-3P60328 96 aa8.13□□□□□ -1.11
TRIM3-214ENST00000536344 FCGBPQ9Y6R7 5405 aaPredicted RBP7.94□□□□□ -1.14
TRIM3-214ENST00000536344 KRTAP19-5Q3LI72 72 aa7.94□□□□□ -1.14
TRIM3-214ENST00000536344 KRTAP19-6Q3LI70 58 aa7.9□□□□□ -1.14
TRIM3-214ENST00000536344 LCE2DQ5TA82 110 aaPredicted RBP7.83□□□□□ -1.16
TRIM3-214ENST00000536344 KRTAP19-7Q3SYF9 63 aa7.7□□□□□ -1.18
TRIM3-214ENST00000536344 MUC12Q9UKN1 5478 aa7.69□□□□□ -1.18
TRIM3-214ENST00000536344 LCE3CQ5T5A8 94 aa7.67□□□□□ -1.18
TRIM3-214ENST00000536344 KRTAP9-6A8MVA2 160 aa7.66□□□□□ -1.18
TRIM3-214ENST00000536344 MACF1Q9UPN3 7388 aaKnown RBP7.66□□□□□ -1.18
TRIM3-214ENST00000536344 KRTAP9-2Q9BYQ4 174 aa7.65□□□□□ -1.18
TRIM3-214ENST00000536344 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
TRIM3-214ENST00000536344 SYNE2Q8WXH0 6885 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms