RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 SSPOA2VEC9 5147 aa8.32□□□□□ -1.08
DDX55-204ENST00000536079 CSAG1Q6PB30 78 aa8.3□□□□□ -1.08
DDX55-204ENST00000536079 H3BPC8 53 aa8.29□□□□□ -1.08
DDX55-204ENST00000536079 TRAV7A0A075B6U4 112 aa8.25□□□□□ -1.09
DDX55-204ENST00000536079 A8MUN3 132 aa8.21□□□□□ -1.1
DDX55-204ENST00000536079 SMIM20Q8N5G0 67 aa8.19□□□□□ -1.1
DDX55-204ENST00000536079 KRTAP19-1Q8IUB9 90 aa8.16□□□□□ -1.1
DDX55-204ENST00000536079 NDUFC1O43677 76 aa8.14□□□□□ -1.11
DDX55-204ENST00000536079 DMAC1Q96GE9 116 aa8.14□□□□□ -1.11
DDX55-204ENST00000536079 SNURFQ9Y675 71 aa8.1□□□□□ -1.11
DDX55-204ENST00000536079 SERP2Q8N6R1 65 aa8.06□□□□□ -1.12
DDX55-204ENST00000536079 FCGBPQ9Y6R7 5405 aaPredicted RBP8.06□□□□□ -1.12
DDX55-204ENST00000536079 SPRR2GQ9BYE4 73 aa8.03□□□□□ -1.12
DDX55-204ENST00000536079 C20orf197Q8N268 126 aa8.02□□□□□ -1.13
DDX55-204ENST00000536079 H0YAA0 97 aa8.01□□□□□ -1.13
DDX55-204ENST00000536079 KRTAP19-6Q3LI70 58 aa8□□□□□ -1.13
DDX55-204ENST00000536079 ADM2Q7Z4H4 148 aa7.99□□□□□ -1.13
DDX55-204ENST00000536079 MT1BP07438 61 aa7.98□□□□□ -1.13
DDX55-204ENST00000536079 KRTAP19-8Q3LI54 63 aa7.96□□□□□ -1.14
DDX55-204ENST00000536079 ACYP2P14621 99 aa7.94□□□□□ -1.14
DDX55-204ENST00000536079 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
DDX55-204ENST00000536079 COX7CP15954 63 aa7.9□□□□□ -1.14
DDX55-204ENST00000536079 KRTAP3-2Q9BYR7 98 aa7.9□□□□□ -1.14
DDX55-204ENST00000536079 P0C880 135 aa7.89□□□□□ -1.15
DDX55-204ENST00000536079 Q5VV11 94 aa7.88□□□□□ -1.15
DDX55-204ENST00000536079 SPANXA2-OT1Q8N9U9 137 aa7.88□□□□□ -1.15
DDX55-204ENST00000536079 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.86□□□□□ -1.15
DDX55-204ENST00000536079 CYSTM1Q9H1C7 97 aa7.86□□□□□ -1.15
DDX55-204ENST00000536079 CHKB-CPT1BH3BT56 60 aa7.79□□□□□ -1.16
DDX55-204ENST00000536079 H7BZZ5 65 aa7.75□□□□□ -1.17
DDX55-204ENST00000536079 ANAPC13Q9BS18 74 aa7.74□□□□□ -1.17
DDX55-204ENST00000536079 SPTSSBQ8NFR3 76 aa7.73□□□□□ -1.17
DDX55-204ENST00000536079 COA5Q86WW8 74 aa7.7□□□□□ -1.18
DDX55-204ENST00000536079 R4GN34 69 aa7.7□□□□□ -1.18
DDX55-204ENST00000536079 M0QZ58 72 aa7.69□□□□□ -1.18
DDX55-204ENST00000536079 KRTAP10-5P60370 271 aa7.69□□□□□ -1.18
DDX55-204ENST00000536079 A6NN06 94 aa7.68□□□□□ -1.18
DDX55-204ENST00000536079 CCDC179H3BU77 68 aa7.66□□□□□ -1.18
DDX55-204ENST00000536079 MACF1Q9UPN3 7388 aaKnown RBP7.65□□□□□ -1.18
DDX55-204ENST00000536079 KRTAP9-7A8MTY7 169 aa7.65□□□□□ -1.18
DDX55-204ENST00000536079 LINC01554Q52M75 96 aa7.58□□□□□ -1.2
DDX55-204ENST00000536079 SYNE2Q8WXH0 6885 aaKnown RBP7.57□□□□□ -1.2
DDX55-204ENST00000536079 MT1XP80297 61 aa7.54□□□□□ -1.2
DDX55-204ENST00000536079 PLAC4Q8WY50 150 aa7.53□□□□□ -1.2
DDX55-204ENST00000536079 KRTAP13-4Q3LI77 160 aa7.51□□□□□ -1.21
DDX55-204ENST00000536079 KRTAP6-3Q3LI67 103 aa7.4□□□□□ -1.22
DDX55-204ENST00000536079 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
DDX55-204ENST00000536079 SERP1Q9Y6X1 66 aa7.36□□□□□ -1.23
DDX55-204ENST00000536079 SEC61GP60059 68 aa7.35□□□□□ -1.23
DDX55-204ENST00000536079 ATP5EP56381 51 aaPredicted RBP7.33□□□□□ -1.24
DDX55-204ENST00000536079 SPATA8Q6RVD6 105 aa7.31□□□□□ -1.24
DDX55-204ENST00000536079 A0A1B0GU33 70 aa7.28□□□□□ -1.24
DDX55-204ENST00000536079 TMEM258P61165 79 aa7.28□□□□□ -1.24
DDX55-204ENST00000536079 KMT2DO14686 5537 aa7.28□□□□□ -1.24
DDX55-204ENST00000536079 A0A1B0GU69 56 aa7.25□□□□□ -1.25
DDX55-204ENST00000536079 A0A0D9SG42 100 aa7.24□□□□□ -1.25
DDX55-204ENST00000536079 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
DDX55-204ENST00000536079 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
DDX55-204ENST00000536079 KRTAP5-9P26371 169 aa7.19□□□□□ -1.26
DDX55-204ENST00000536079 MUC12Q9UKN1 5478 aa7.19□□□□□ -1.26
DDX55-204ENST00000536079 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
DDX55-204ENST00000536079 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
DDX55-204ENST00000536079 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
DDX55-204ENST00000536079 KRTAP10-12P60413 245 aa7.13□□□□□ -1.27
DDX55-204ENST00000536079 KRTAP12-1P59990 96 aa7.12□□□□□ -1.27
DDX55-204ENST00000536079 A8MU10 97 aa7.11□□□□□ -1.27
DDX55-204ENST00000536079 CAMK2N1Q7Z7J9 78 aa7.11□□□□□ -1.27
DDX55-204ENST00000536079 NEBP20929 6669 aa7.1□□□□□ -1.27
DDX55-204ENST00000536079 SPINT4Q6UDR6 99 aa7.1□□□□□ -1.27
DDX55-204ENST00000536079 KRTAP8-1Q8IUC2 63 aa7.08□□□□□ -1.28
DDX55-204ENST00000536079 MDN1Q9NU22 5596 aa7.05□□□□□ -1.28
DDX55-204ENST00000536079 PRR15LQ9BU68 103 aa7.04□□□□□ -1.28
DDX55-204ENST00000536079 SPRR2FQ96RM1 72 aa7.03□□□□□ -1.28
DDX55-204ENST00000536079 SMIM26A0A096LP01 95 aa7.02□□□□□ -1.29
DDX55-204ENST00000536079 PCP4P48539 62 aa6.9□□□□□ -1.3
DDX55-204ENST00000536079 SPRR2EP22531 72 aa6.87□□□□□ -1.31
DDX55-204ENST00000536079 SPRR2BP35325 72 aa6.87□□□□□ -1.31
DDX55-204ENST00000536079 SPRR2AP35326 72 aa6.87□□□□□ -1.31
DDX55-204ENST00000536079 UQCR11O14957 56 aa6.85□□□□□ -1.31
DDX55-204ENST00000536079 LCE1AQ5T7P2 110 aa6.85□□□□□ -1.31
DDX55-204ENST00000536079 PSPHP1O15172 72 aa6.83□□□□□ -1.32
DDX55-204ENST00000536079 Q1T7F1 81 aa6.83□□□□□ -1.32
DDX55-204ENST00000536079 C10orf95Q9H7T3 257 aa6.81□□□□□ -1.32
DDX55-204ENST00000536079 V9GYY9 64 aa6.77□□□□□ -1.33
DDX55-204ENST00000536079 MIR22HGQ0VDD5 57 aa6.76□□□□□ -1.33
DDX55-204ENST00000536079 KRTAP19-7Q3SYF9 63 aa6.74□□□□□ -1.33
DDX55-204ENST00000536079 KRTAP20-1Q3LI63 56 aa6.72□□□□□ -1.33
DDX55-204ENST00000536079 RPS28P62857 69 aaKnown RBP6.68□□□□□ -1.34
DDX55-204ENST00000536079 MT1EP04732 61 aa6.65□□□□□ -1.34
DDX55-204ENST00000536079 TNP1P09430 55 aa6.63□□□□□ -1.35
DDX55-204ENST00000536079 SPRR2DP22532 72 aa6.63□□□□□ -1.35
DDX55-204ENST00000536079 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
DDX55-204ENST00000536079 KRTAP2-3P0C7H8 128 aa6.61□□□□□ -1.35
DDX55-204ENST00000536079 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
DDX55-204ENST00000536079 KRTAP2-4Q9BYR9 128 aa6.61□□□□□ -1.35
DDX55-204ENST00000536079 A6NED7 52 aa6.54□□□□□ -1.36
DDX55-204ENST00000536079 LCE5AQ5TCM9 118 aa6.51□□□□□ -1.37
DDX55-204ENST00000536079 KRTAP19-3Q7Z4W3 81 aa6.5□□□□□ -1.37
DDX55-204ENST00000536079 K7ERS5 55 aa6.47□□□□□ -1.37
DDX55-204ENST00000536079 LCE3BQ5TA77 95 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms