RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 A0A1B0GU69 56 aa6.77□□□□□ -1.33
SCARB1-204ENST00000535005 LINC00313P59037 77 aa6.77□□□□□ -1.33
SCARB1-204ENST00000535005 UQCR11O14957 56 aa6.73□□□□□ -1.33
SCARB1-204ENST00000535005 IGKV2-30P06310 120 aa6.73□□□□□ -1.33
SCARB1-204ENST00000535005 C9orf92A6NGG3 77 aa6.7□□□□□ -1.34
SCARB1-204ENST00000535005 MIR22HGQ0VDD5 57 aa6.69□□□□□ -1.34
SCARB1-204ENST00000535005 LPAP08519 4548 aa6.69□□□□□ -1.34
SCARB1-204ENST00000535005 LINC01554Q52M75 96 aa6.67□□□□□ -1.34
SCARB1-204ENST00000535005 KRTAP16-1A8MUX0 517 aa6.66□□□□□ -1.34
SCARB1-204ENST00000535005 XP32Q5T750 250 aa6.66□□□□□ -1.34
SCARB1-204ENST00000535005 KRTAP3-3Q9BYR6 98 aa6.66□□□□□ -1.34
SCARB1-204ENST00000535005 KRTAP3-2Q9BYR7 98 aa6.66□□□□□ -1.34
SCARB1-204ENST00000535005 LRP2P98164 4655 aa6.66□□□□□ -1.34
SCARB1-204ENST00000535005 PRAC1Q96KF2 57 aa6.63□□□□□ -1.35
SCARB1-204ENST00000535005 C20orf166-AS1Q96NR2 134 aa6.62□□□□□ -1.35
SCARB1-204ENST00000535005 A8MUU9 505 aa6.62□□□□□ -1.35
SCARB1-204ENST00000535005 IGKV2D-30A0A075B6S6 120 aa6.6□□□□□ -1.35
SCARB1-204ENST00000535005 RPL37P61927 97 aaKnown RBP6.6□□□□□ -1.35
SCARB1-204ENST00000535005 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
SCARB1-204ENST00000535005 MUC17Q685J3 4493 aa6.55□□□□□ -1.36
SCARB1-204ENST00000535005 SEC61BP60468 96 aaKnown RBP6.55□□□□□ -1.36
SCARB1-204ENST00000535005 UBR4Q5T4S7 5183 aa6.51□□□□□ -1.37
SCARB1-204ENST00000535005 CSAG1Q6PB30 78 aa6.47□□□□□ -1.37
SCARB1-204ENST00000535005 RNF213Q63HN8 5207 aa6.43□□□□□ -1.38
SCARB1-204ENST00000535005 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.38
SCARB1-204ENST00000535005 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
SCARB1-204ENST00000535005 H0YAA0 97 aa6.35□□□□□ -1.39
SCARB1-204ENST00000535005 MUC2Q02817 5179 aa6.34□□□□□ -1.4
SCARB1-204ENST00000535005 A0A1B0GU33 70 aa6.33□□□□□ -1.4
SCARB1-204ENST00000535005 H3BS24 57 aa6.33□□□□□ -1.4
SCARB1-204ENST00000535005 H1FX-AS1Q4G0G2 97 aa6.32□□□□□ -1.4
SCARB1-204ENST00000535005 K7ERS5 55 aa6.3□□□□□ -1.4
SCARB1-204ENST00000535005 ROMO1P60602 79 aa6.24□□□□□ -1.41
SCARB1-204ENST00000535005 KRTAP19-2Q3LHN2 52 aa6.22□□□□□ -1.41
SCARB1-204ENST00000535005 KRTAP3-1Q9BYR8 98 aa6.18□□□□□ -1.42
SCARB1-204ENST00000535005 FAT4Q6V0I7 4981 aa6.18□□□□□ -1.42
SCARB1-204ENST00000535005 LCE2CQ5TA81 110 aa6.18□□□□□ -1.42
SCARB1-204ENST00000535005 COX6B2Q6YFQ2 88 aa6.15□□□□□ -1.42
SCARB1-204ENST00000535005 FLGP20930 4061 aaPredicted RBP6.11□□□□□ -1.43
SCARB1-204ENST00000535005 MT1HP80294 61 aa6.05□□□□□ -1.44
SCARB1-204ENST00000535005 LCE2AQ5TA79 106 aaPredicted RBP6.02□□□□□ -1.45
SCARB1-204ENST00000535005 KRTAP10-6P60371 365 aaPredicted RBP5.98□□□□□ -1.45
SCARB1-204ENST00000535005 P0C880 135 aa5.97□□□□□ -1.45
SCARB1-204ENST00000535005 S4R3F8 94 aa5.95□□□□□ -1.46
SCARB1-204ENST00000535005 M0R2T5 61 aa5.94□□□□□ -1.46
SCARB1-204ENST00000535005 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
SCARB1-204ENST00000535005 SPINT4Q6UDR6 99 aa5.91□□□□□ -1.46
SCARB1-204ENST00000535005 KRTAP13-4Q3LI77 160 aa5.89□□□□□ -1.47
SCARB1-204ENST00000535005 LORP23490 312 aaPredicted RBP5.85□□□□□ -1.47
SCARB1-204ENST00000535005 A0A0D9SG42 100 aa5.85□□□□□ -1.47
SCARB1-204ENST00000535005 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
SCARB1-204ENST00000535005 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
SCARB1-204ENST00000535005 M0QZ58 72 aa5.78□□□□□ -1.48
SCARB1-204ENST00000535005 MT2AP02795 61 aa5.75□□□□□ -1.49
SCARB1-204ENST00000535005 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
SCARB1-204ENST00000535005 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
SCARB1-204ENST00000535005 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
SCARB1-204ENST00000535005 NDUFAF8A1L188 74 aa5.71□□□□□ -1.5
SCARB1-204ENST00000535005 MT1FP04733 61 aa5.7□□□□□ -1.5
SCARB1-204ENST00000535005 LCE2BO14633 110 aa5.68□□□□□ -1.5
SCARB1-204ENST00000535005 KRTAP10-10P60014 251 aa5.67□□□□□ -1.5
SCARB1-204ENST00000535005 KRTAP9-3Q9BYQ3 159 aa5.61□□□□□ -1.51
SCARB1-204ENST00000535005 SPRR2GQ9BYE4 73 aa5.53□□□□□ -1.52
SCARB1-204ENST00000535005 KRTAP19-1Q8IUB9 90 aa5.52□□□□□ -1.53
SCARB1-204ENST00000535005 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
SCARB1-204ENST00000535005 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
SCARB1-204ENST00000535005 R4GN34 69 aa5.47□□□□□ -1.53
SCARB1-204ENST00000535005 PLAC4Q8WY50 150 aa5.46□□□□□ -1.53
SCARB1-204ENST00000535005 KRTAP19-8Q3LI54 63 aa5.44□□□□□ -1.54
SCARB1-204ENST00000535005 USH2AO75445 5202 aa5.43□□□□□ -1.54
SCARB1-204ENST00000535005 MT1BP07438 61 aa5.36□□□□□ -1.55
SCARB1-204ENST00000535005 LUZP6Q538Z0 58 aa5.34□□□□□ -1.55
SCARB1-204ENST00000535005 SSPOA2VEC9 5147 aa5.29□□□□□ -1.56
SCARB1-204ENST00000535005 FSIP2Q5CZC0 6907 aa5.29□□□□□ -1.56
SCARB1-204ENST00000535005 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
SCARB1-204ENST00000535005 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
SCARB1-204ENST00000535005 CRCT1Q9UGL9 99 aa5.25□□□□□ -1.57
SCARB1-204ENST00000535005 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
SCARB1-204ENST00000535005 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
SCARB1-204ENST00000535005 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.59
SCARB1-204ENST00000535005 KRTAP10-5P60370 271 aa5.15□□□□□ -1.59
SCARB1-204ENST00000535005 SPRR5A0A1B0GTR4 108 aa5.13□□□□□ -1.59
SCARB1-204ENST00000535005 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
SCARB1-204ENST00000535005 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
SCARB1-204ENST00000535005 TNP1P09430 55 aa5.11□□□□□ -1.59
SCARB1-204ENST00000535005 MT1XP80297 61 aa5.11□□□□□ -1.59
SCARB1-204ENST00000535005 FCGBPQ9Y6R7 5405 aaPredicted RBP5.11□□□□□ -1.59
SCARB1-204ENST00000535005 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
SCARB1-204ENST00000535005 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
SCARB1-204ENST00000535005 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
SCARB1-204ENST00000535005 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.86□□□□□ -1.63
SCARB1-204ENST00000535005 MACF1Q9UPN3 7388 aaKnown RBP4.85□□□□□ -1.63
SCARB1-204ENST00000535005 INE1O15225 51 aa4.81□□□□□ -1.64
SCARB1-204ENST00000535005 KRTAP4-8A0A0G2JLE6 195 aa4.75□□□□□ -1.65
SCARB1-204ENST00000535005 KRTAP4-8Q9BYQ9 185 aa4.75□□□□□ -1.65
SCARB1-204ENST00000535005 KMT2DO14686 5537 aa4.74□□□□□ -1.65
SCARB1-204ENST00000535005 SYNE2Q8WXH0 6885 aaKnown RBP4.72□□□□□ -1.65
SCARB1-204ENST00000535005 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
SCARB1-204ENST00000535005 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
SCARB1-204ENST00000535005 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 216.3 ms