RNA–Protein interactions for RNA: ENST00000534207.5

CHID1-223, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,171 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-223ENST00000534207 NDUFC1O43677 76 aa8.62□□□□□ -1.03
CHID1-223ENST00000534207 CSAG1Q6PB30 78 aa8.6□□□□□ -1.03
CHID1-223ENST00000534207 KRTAP9-8Q9BYQ0 159 aa8.6□□□□□ -1.03
CHID1-223ENST00000534207 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
CHID1-223ENST00000534207 ACYP2P14621 99 aa8.56□□□□□ -1.04
CHID1-223ENST00000534207 CRCT1Q9UGL9 99 aa8.53□□□□□ -1.04
CHID1-223ENST00000534207 MT2AP02795 61 aa8.52□□□□□ -1.05
CHID1-223ENST00000534207 H7BZZ5 65 aa8.51□□□□□ -1.05
CHID1-223ENST00000534207 LCE2DQ5TA82 110 aaPredicted RBP8.47□□□□□ -1.05
CHID1-223ENST00000534207 CCDC179H3BU77 68 aa8.46□□□□□ -1.06
CHID1-223ENST00000534207 CYSTM1Q9H1C7 97 aa8.46□□□□□ -1.06
CHID1-223ENST00000534207 FSIP2Q5CZC0 6907 aa8.45□□□□□ -1.06
CHID1-223ENST00000534207 MT1FP04733 61 aa8.44□□□□□ -1.06
CHID1-223ENST00000534207 H0YAA0 97 aa8.42□□□□□ -1.06
CHID1-223ENST00000534207 KRTAP10-10P60014 251 aa8.42□□□□□ -1.06
CHID1-223ENST00000534207 SPTSSBQ8NFR3 76 aa8.39□□□□□ -1.07
CHID1-223ENST00000534207 CHKB-CPT1BH3BT56 60 aa8.36□□□□□ -1.07
CHID1-223ENST00000534207 ATP5EP56381 51 aaPredicted RBP8.34□□□□□ -1.07
CHID1-223ENST00000534207 KRTAP9-3Q9BYQ3 159 aa8.33□□□□□ -1.08
CHID1-223ENST00000534207 COA5Q86WW8 74 aa8.3□□□□□ -1.08
CHID1-223ENST00000534207 TMEM258P61165 79 aa8.26□□□□□ -1.09
CHID1-223ENST00000534207 CRIPTQ9P021 101 aa8.25□□□□□ -1.09
CHID1-223ENST00000534207 ADM2Q7Z4H4 148 aa8.22□□□□□ -1.09
CHID1-223ENST00000534207 SPRR2GQ9BYE4 73 aa8.15□□□□□ -1.1
CHID1-223ENST00000534207 LCE2BO14633 110 aa8.14□□□□□ -1.11
CHID1-223ENST00000534207 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
CHID1-223ENST00000534207 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
CHID1-223ENST00000534207 KRTAP9-7A8MTY7 169 aa8.09□□□□□ -1.11
CHID1-223ENST00000534207 P0C880 135 aa8.09□□□□□ -1.11
CHID1-223ENST00000534207 PCP4P48539 62 aa8.09□□□□□ -1.11
CHID1-223ENST00000534207 KRTAP19-8Q3LI54 63 aa8.02□□□□□ -1.13
CHID1-223ENST00000534207 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.01□□□□□ -1.13
CHID1-223ENST00000534207 R4GN34 69 aa8□□□□□ -1.13
CHID1-223ENST00000534207 USH2AO75445 5202 aa7.99□□□□□ -1.13
CHID1-223ENST00000534207 SEC61GP60059 68 aa7.99□□□□□ -1.13
CHID1-223ENST00000534207 SERP1Q9Y6X1 66 aa7.99□□□□□ -1.13
CHID1-223ENST00000534207 Q5VV11 94 aa7.95□□□□□ -1.14
CHID1-223ENST00000534207 M0QZ58 72 aa7.94□□□□□ -1.14
CHID1-223ENST00000534207 MT1BP07438 61 aa7.9□□□□□ -1.14
CHID1-223ENST00000534207 A0A1B0GU69 56 aa7.87□□□□□ -1.15
CHID1-223ENST00000534207 KRTAP19-6Q3LI70 58 aa7.85□□□□□ -1.15
CHID1-223ENST00000534207 LINC01558Q9Y6Z2 57 aa7.85□□□□□ -1.15
CHID1-223ENST00000534207 PRR15LQ9BU68 103 aa7.82□□□□□ -1.16
CHID1-223ENST00000534207 SSPOA2VEC9 5147 aa7.82□□□□□ -1.16
CHID1-223ENST00000534207 A0A1B0GU33 70 aa7.8□□□□□ -1.16
CHID1-223ENST00000534207 RPS28P62857 69 aaKnown RBP7.77□□□□□ -1.17
CHID1-223ENST00000534207 A6NN06 94 aa7.76□□□□□ -1.17
CHID1-223ENST00000534207 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
CHID1-223ENST00000534207 V9GYY9 64 aa7.75□□□□□ -1.17
CHID1-223ENST00000534207 LINC01554Q52M75 96 aa7.73□□□□□ -1.17
CHID1-223ENST00000534207 PLAC4Q8WY50 150 aa7.73□□□□□ -1.17
CHID1-223ENST00000534207 SMIM26A0A096LP01 95 aa7.7□□□□□ -1.18
CHID1-223ENST00000534207 Q1T7F1 81 aa7.69□□□□□ -1.18
CHID1-223ENST00000534207 KRTAP10-5P60370 271 aa7.65□□□□□ -1.18
CHID1-223ENST00000534207 FCGBPQ9Y6R7 5405 aaPredicted RBP7.64□□□□□ -1.19
CHID1-223ENST00000534207 SPATA8Q6RVD6 105 aa7.63□□□□□ -1.19
CHID1-223ENST00000534207 PRO2289Q9P1D8 64 aa7.58□□□□□ -1.2
CHID1-223ENST00000534207 UQCR11O14957 56 aa7.56□□□□□ -1.2
CHID1-223ENST00000534207 MT1XP80297 61 aa7.53□□□□□ -1.2
CHID1-223ENST00000534207 A0A0D9SG42 100 aa7.52□□□□□ -1.21
CHID1-223ENST00000534207 PSPHP1O15172 72 aa7.49□□□□□ -1.21
CHID1-223ENST00000534207 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
CHID1-223ENST00000534207 A8MU10 97 aa7.44□□□□□ -1.22
CHID1-223ENST00000534207 SYNE2Q8WXH0 6885 aaKnown RBP7.43□□□□□ -1.22
CHID1-223ENST00000534207 MACF1Q9UPN3 7388 aaKnown RBP7.42□□□□□ -1.22
CHID1-223ENST00000534207 SPINT4Q6UDR6 99 aa7.41□□□□□ -1.22
CHID1-223ENST00000534207 CAMK2N1Q7Z7J9 78 aa7.41□□□□□ -1.22
CHID1-223ENST00000534207 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.22
CHID1-223ENST00000534207 KRTAP12-2P59991 146 aa7.38□□□□□ -1.23
CHID1-223ENST00000534207 A6NED7 52 aa7.3□□□□□ -1.24
CHID1-223ENST00000534207 K7ERS5 55 aa7.21□□□□□ -1.26
CHID1-223ENST00000534207 KRTAP6-3Q3LI67 103 aa7.21□□□□□ -1.26
CHID1-223ENST00000534207 KRTAP10-12P60413 245 aa7.2□□□□□ -1.26
CHID1-223ENST00000534207 KRTAP10-7P60409 375 aaPredicted RBP7.16□□□□□ -1.26
CHID1-223ENST00000534207 CDC42SE1Q9NRR8 79 aa7.14□□□□□ -1.27
CHID1-223ENST00000534207 C10orf95Q9H7T3 257 aa7.08□□□□□ -1.28
CHID1-223ENST00000534207 NEBP20929 6669 aa7.06□□□□□ -1.28
CHID1-223ENST00000534207 KRTAP5-9P26371 169 aa7.03□□□□□ -1.28
CHID1-223ENST00000534207 TNP1P09430 55 aa7.01□□□□□ -1.29
CHID1-223ENST00000534207 KRTAP8-1Q8IUC2 63 aa7.01□□□□□ -1.29
CHID1-223ENST00000534207 KRTAP20-1Q3LI63 56 aa7□□□□□ -1.29
CHID1-223ENST00000534207 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
CHID1-223ENST00000534207 KRTAP4-8Q9BYQ9 185 aa6.98□□□□□ -1.29
CHID1-223ENST00000534207 MUC12Q9UKN1 5478 aa6.95□□□□□ -1.3
CHID1-223ENST00000534207 KMT2DO14686 5537 aa6.93□□□□□ -1.3
CHID1-223ENST00000534207 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
CHID1-223ENST00000534207 SPRR2FQ96RM1 72 aa6.85□□□□□ -1.31
CHID1-223ENST00000534207 BRK1Q8WUW1 75 aa6.81□□□□□ -1.32
CHID1-223ENST00000534207 ROMO1P60602 79 aa6.79□□□□□ -1.32
CHID1-223ENST00000534207 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
CHID1-223ENST00000534207 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
CHID1-223ENST00000534207 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
CHID1-223ENST00000534207 MDN1Q9NU22 5596 aa6.67□□□□□ -1.34
CHID1-223ENST00000534207 MT1EP04732 61 aa6.65□□□□□ -1.34
CHID1-223ENST00000534207 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.34
CHID1-223ENST00000534207 LCE1AQ5T7P2 110 aa6.64□□□□□ -1.35
CHID1-223ENST00000534207 SPRR2EP22531 72 aa6.63□□□□□ -1.35
CHID1-223ENST00000534207 SPRR2BP35325 72 aa6.63□□□□□ -1.35
CHID1-223ENST00000534207 SPRR2AP35326 72 aa6.63□□□□□ -1.35
CHID1-223ENST00000534207 KRTAP2-3P0C7H8 128 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms