RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 C5orf56Q8N8D9 126 aa2.4□□□□□ -2.03
ITGB1-219ENST00000534049 C15orf56Q8N910 161 aa2.4□□□□□ -2.03
ITGB1-219ENST00000534049 LINC00304Q8N9R0 145 aa2.4□□□□□ -2.03
ITGB1-219ENST00000534049 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
ITGB1-219ENST00000534049 MMP24-AS1A0A0U1RRL7 71 aa2.39□□□□□ -2.03
ITGB1-219ENST00000534049 HTN1P15515 57 aa2.39□□□□□ -2.03
ITGB1-219ENST00000534049 Q6ZRX8 168 aa2.39□□□□□ -2.03
ITGB1-219ENST00000534049 DNAH6Q9C0G6 4158 aa2.39□□□□□ -2.03
ITGB1-219ENST00000534049 DNAH10Q8IVF4 4471 aa2.38□□□□□ -2.03
ITGB1-219ENST00000534049 G3V318 75 aa2.38□□□□□ -2.03
ITGB1-219ENST00000534049 KMT2AQ03164 3969 aa2.38□□□□□ -2.03
ITGB1-219ENST00000534049 DEFB136Q30KP8 78 aa2.38□□□□□ -2.03
ITGB1-219ENST00000534049 DEFB105AQ8NG35 78 aa2.38□□□□□ -2.03
ITGB1-219ENST00000534049 TENM2Q9NT68 2774 aa2.38□□□□□ -2.03
ITGB1-219ENST00000534049 FAT2Q9NYQ8 4349 aa2.37□□□□□ -2.03
ITGB1-219ENST00000534049 PCLOQ9Y6V0 5065 aa2.37□□□□□ -2.03
ITGB1-219ENST00000534049 SPRR1AP35321 89 aa2.37□□□□□ -2.03
ITGB1-219ENST00000534049 CLPSL2Q6UWE3 100 aa2.37□□□□□ -2.03
ITGB1-219ENST00000534049 UNQ6190/PRO20217Q6UXQ8 127 aa2.37□□□□□ -2.03
ITGB1-219ENST00000534049 Q96NJ1 140 aa2.37□□□□□ -2.03
ITGB1-219ENST00000534049 VPS13DQ5THJ4 4388 aa2.37□□□□□ -2.03
ITGB1-219ENST00000534049 DNAH2Q9P225 4427 aa2.37□□□□□ -2.03
ITGB1-219ENST00000534049 PKHD1P08F94 4074 aa2.37□□□□□ -2.03
ITGB1-219ENST00000534049 DYNC1H1Q14204 4646 aaKnown RBP2.36□□□□□ -2.03
ITGB1-219ENST00000534049 IGFL1Q6UW32 110 aa2.36□□□□□ -2.03
ITGB1-219ENST00000534049 SSBP3-AS1Q7Z2R9 100 aa2.36□□□□□ -2.03
ITGB1-219ENST00000534049 DNAH11Q96DT5 4516 aa2.36□□□□□ -2.03
ITGB1-219ENST00000534049 NBDYA0A0U1RRE5 68 aa2.35□□□□□ -2.03
ITGB1-219ENST00000534049 MRPL34Q9BQ48 92 aaKnown RBP2.35□□□□□ -2.03
ITGB1-219ENST00000534049 A0A0G2JQZ4 141 aa2.34□□□□□ -2.03
ITGB1-219ENST00000534049 A0A1B0GU33 70 aa2.34□□□□□ -2.03
ITGB1-219ENST00000534049 RPL37AP61513 92 aaKnown RBP2.34□□□□□ -2.03
ITGB1-219ENST00000534049 COX6B2Q6YFQ2 88 aa2.34□□□□□ -2.03
ITGB1-219ENST00000534049 KIAA1109Q2LD37 5005 aa2.34□□□□□ -2.04
ITGB1-219ENST00000534049 A0A1W2PNN7 141 aa2.33□□□□□ -2.04
ITGB1-219ENST00000534049 RYR1P21817 5038 aa2.32□□□□□ -2.04
ITGB1-219ENST00000534049 SPRR1BP22528 89 aa2.32□□□□□ -2.04
ITGB1-219ENST00000534049 ABCA13Q86UQ4 5058 aa2.32□□□□□ -2.04
ITGB1-219ENST00000534049 NOP10Q9NPE3 64 aaKnown RBP2.31□□□□□ -2.04
ITGB1-219ENST00000534049 PRO0255Q9UI72 69 aa2.31□□□□□ -2.04
ITGB1-219ENST00000534049 HSPG2P98160 4391 aa2.31□□□□□ -2.04
ITGB1-219ENST00000534049 LRP1BQ9NZR2 4599 aa2.31□□□□□ -2.04
ITGB1-219ENST00000534049 DNAH17Q9UFH2 4485 aa2.3□□□□□ -2.04
ITGB1-219ENST00000534049 SORL1Q92673 2214 aa2.3□□□□□ -2.04
ITGB1-219ENST00000534049 CRIPTQ9P021 101 aa2.3□□□□□ -2.04
ITGB1-219ENST00000534049 APOBP04114 4563 aaKnown RBP2.29□□□□□ -2.04
ITGB1-219ENST00000534049 PSORS1C2Q9UIG4 136 aa2.29□□□□□ -2.04
ITGB1-219ENST00000534049 KRTAP10-10P60014 251 aa2.28□□□□□ -2.04
ITGB1-219ENST00000534049 LELP1Q5T871 98 aa2.28□□□□□ -2.04
ITGB1-219ENST00000534049 DNAH5Q8TE73 4624 aa2.28□□□□□ -2.04
ITGB1-219ENST00000534049 H0YAA0 97 aa2.27□□□□□ -2.05
ITGB1-219ENST00000534049 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
ITGB1-219ENST00000534049 Q6ZSA8 131 aa2.27□□□□□ -2.05
ITGB1-219ENST00000534049 PRO2289Q9P1D8 64 aa2.27□□□□□ -2.05
ITGB1-219ENST00000534049 PKD1P98161 4303 aa2.27□□□□□ -2.05
ITGB1-219ENST00000534049 H1FX-AS1Q4G0G2 97 aa2.26□□□□□ -2.05
ITGB1-219ENST00000534049 SPRR5A0A1B0GTR4 108 aa2.24□□□□□ -2.05
ITGB1-219ENST00000534049 FAT1Q14517 4588 aa2.24□□□□□ -2.05
ITGB1-219ENST00000534049 HERC1Q15751 4861 aa2.23□□□□□ -2.05
ITGB1-219ENST00000534049 RPL37P61927 97 aaKnown RBP2.23□□□□□ -2.05
ITGB1-219ENST00000534049 TPRXLQ17RH7 258 aa2.23□□□□□ -2.05
ITGB1-219ENST00000534049 DEFB135Q30KP9 77 aa2.23□□□□□ -2.05
ITGB1-219ENST00000534049 PLAC4Q8WY50 150 aa2.23□□□□□ -2.05
ITGB1-219ENST00000534049 MYCBP2O75592 4640 aa2.22□□□□□ -2.05
ITGB1-219ENST00000534049 H3BNG1 76 aa2.2□□□□□ -2.06
ITGB1-219ENST00000534049 DEFB130BP0DP73 79 aa2.2□□□□□ -2.06
ITGB1-219ENST00000534049 DEFB130AP0DP74 79 aa2.2□□□□□ -2.06
ITGB1-219ENST00000534049 DEFB4AO15263 64 aa2.19□□□□□ -2.06
ITGB1-219ENST00000534049 INE1O15225 51 aa2.18□□□□□ -2.06
ITGB1-219ENST00000534049 DNAH8Q96JB1 4490 aa2.18□□□□□ -2.06
ITGB1-219ENST00000534049 VPS13BQ7Z7G8 4022 aa2.18□□□□□ -2.06
ITGB1-219ENST00000534049 APLNQ9ULZ1 77 aa2.17□□□□□ -2.06
ITGB1-219ENST00000534049 HMCN2Q8NDA2 5059 aa2.16□□□□□ -2.06
ITGB1-219ENST00000534049 A0A096LPF7 62 aa2.15□□□□□ -2.07
ITGB1-219ENST00000534049 PRLHP81277 87 aa2.15□□□□□ -2.07
ITGB1-219ENST00000534049 R4GN34 69 aa2.15□□□□□ -2.07
ITGB1-219ENST00000534049 LINC01556Q5JQF7 62 aa2.14□□□□□ -2.07
ITGB1-219ENST00000534049 Q6ZRN7 208 aaPredicted RBP2.14□□□□□ -2.07
ITGB1-219ENST00000534049 SPART-AS1P0CW21 52 aa2.13□□□□□ -2.07
ITGB1-219ENST00000534049 UBE2DNLQ8IWF7 75 aa2.13□□□□□ -2.07
ITGB1-219ENST00000534049 FAT3Q8TDW7 4589 aa2.13□□□□□ -2.07
ITGB1-219ENST00000534049 SPINK1P00995 79 aa2.12□□□□□ -2.07
ITGB1-219ENST00000534049 DMBT1Q9UGM3 2413 aaPredicted RBP2.12□□□□□ -2.07
ITGB1-219ENST00000534049 UBR4Q5T4S7 5183 aa2.12□□□□□ -2.07
ITGB1-219ENST00000534049 PKHD1L1Q86WI1 4243 aa2.12□□□□□ -2.07
ITGB1-219ENST00000534049 LRP1Q07954 4544 aaKnown RBP2.11□□□□□ -2.07
ITGB1-219ENST00000534049 SPACA4Q8TDM5 124 aa2.11□□□□□ -2.07
ITGB1-219ENST00000534049 HTN3P15516 51 aa2.1□□□□□ -2.07
ITGB1-219ENST00000534049 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
ITGB1-219ENST00000534049 KRTAP13-1Q8IUC0 172 aa2.08□□□□□ -2.08
ITGB1-219ENST00000534049 FLG2Q5D862 2391 aaPredicted RBP2.07□□□□□ -2.08
ITGB1-219ENST00000534049 TNXBP22105 4242 aa2.07□□□□□ -2.08
ITGB1-219ENST00000534049 A0A096LNI7 61 aa2.07□□□□□ -2.08
ITGB1-219ENST00000534049 S4R3F8 94 aa2.07□□□□□ -2.08
ITGB1-219ENST00000534049 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
ITGB1-219ENST00000534049 SRRM2Q9UQ35 2752 aaKnown RBP2.05□□□□□ -2.08
ITGB1-219ENST00000534049 LRP2P98164 4655 aa2.05□□□□□ -2.08
ITGB1-219ENST00000534049 Q5VSD8 79 aa2.04□□□□□ -2.08
ITGB1-219ENST00000534049 SPINK6Q6UWN8 80 aa2.04□□□□□ -2.08
ITGB1-219ENST00000534049 KRTAP10-4P60372 401 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms