RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 KRTAP4-5Q9BYR2 181 aa8.33□□□□□ -1.08
ATP2C1-224ENST00000533801 SPATA8Q6RVD6 105 aa8.31□□□□□ -1.08
ATP2C1-224ENST00000533801 RPL37P61927 97 aaKnown RBP8.3□□□□□ -1.08
ATP2C1-224ENST00000533801 A6NN06 94 aa8.3□□□□□ -1.08
ATP2C1-224ENST00000533801 LRP2P98164 4655 aa8.29□□□□□ -1.08
ATP2C1-224ENST00000533801 MT1HL1P0DM35 61 aa8.28□□□□□ -1.08
ATP2C1-224ENST00000533801 ADM2Q7Z4H4 148 aa8.27□□□□□ -1.09
ATP2C1-224ENST00000533801 A0A1B0GU33 70 aa8.25□□□□□ -1.09
ATP2C1-224ENST00000533801 LPAP08519 4548 aa8.24□□□□□ -1.09
ATP2C1-224ENST00000533801 A0A0D9SG42 100 aa8.22□□□□□ -1.09
ATP2C1-224ENST00000533801 ABCA13Q86UQ4 5058 aa8.22□□□□□ -1.09
ATP2C1-224ENST00000533801 J3QL48 77 aa8.21□□□□□ -1.1
ATP2C1-224ENST00000533801 H0YAA0 97 aa8.17□□□□□ -1.1
ATP2C1-224ENST00000533801 S4R3F8 94 aa8.17□□□□□ -1.1
ATP2C1-224ENST00000533801 H1FX-AS1Q4G0G2 97 aa8.14□□□□□ -1.11
ATP2C1-224ENST00000533801 CRIPTQ9P021 101 aa8.1□□□□□ -1.11
ATP2C1-224ENST00000533801 H3BS24 57 aa8.09□□□□□ -1.11
ATP2C1-224ENST00000533801 CSAG1Q6PB30 78 aa8.06□□□□□ -1.12
ATP2C1-224ENST00000533801 LINC01554Q52M75 96 aa8.05□□□□□ -1.12
ATP2C1-224ENST00000533801 HERC2O95714 4834 aa8.02□□□□□ -1.12
ATP2C1-224ENST00000533801 KRTAP3-3Q9BYR6 98 aa8.02□□□□□ -1.13
ATP2C1-224ENST00000533801 P0C880 135 aa8.01□□□□□ -1.13
ATP2C1-224ENST00000533801 K7ERS5 55 aa7.99□□□□□ -1.13
ATP2C1-224ENST00000533801 TPRXLQ17RH7 258 aa7.98□□□□□ -1.13
ATP2C1-224ENST00000533801 KRTAP13-4Q3LI77 160 aa7.94□□□□□ -1.14
ATP2C1-224ENST00000533801 SPINT4Q6UDR6 99 aa7.92□□□□□ -1.14
ATP2C1-224ENST00000533801 KRTAP10-6P60371 365 aaPredicted RBP7.92□□□□□ -1.14
ATP2C1-224ENST00000533801 MUC2Q02817 5179 aa7.91□□□□□ -1.14
ATP2C1-224ENST00000533801 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
ATP2C1-224ENST00000533801 SEC61BP60468 96 aaKnown RBP7.84□□□□□ -1.15
ATP2C1-224ENST00000533801 HERC1Q15751 4861 aa7.77□□□□□ -1.17
ATP2C1-224ENST00000533801 KRTAP4-1Q9BYQ7 146 aa7.76□□□□□ -1.17
ATP2C1-224ENST00000533801 M0QZ58 72 aa7.74□□□□□ -1.17
ATP2C1-224ENST00000533801 R4GN34 69 aa7.7□□□□□ -1.18
ATP2C1-224ENST00000533801 KRTAP12-2P59991 146 aa7.68□□□□□ -1.18
ATP2C1-224ENST00000533801 BIRC6Q9NR09 4857 aa7.66□□□□□ -1.18
ATP2C1-224ENST00000533801 ROMO1P60602 79 aa7.65□□□□□ -1.18
ATP2C1-224ENST00000533801 C10orf95Q9H7T3 257 aa7.65□□□□□ -1.18
ATP2C1-224ENST00000533801 PCLOQ9Y6V0 5065 aa7.64□□□□□ -1.19
ATP2C1-224ENST00000533801 KRTAP25-1Q3LHN0 102 aa7.6□□□□□ -1.19
ATP2C1-224ENST00000533801 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
ATP2C1-224ENST00000533801 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
ATP2C1-224ENST00000533801 MUC17Q685J3 4493 aa7.54□□□□□ -1.2
ATP2C1-224ENST00000533801 FAT4Q6V0I7 4981 aa7.54□□□□□ -1.2
ATP2C1-224ENST00000533801 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
ATP2C1-224ENST00000533801 M0R2T5 61 aa7.45□□□□□ -1.22
ATP2C1-224ENST00000533801 UBR4Q5T4S7 5183 aa7.39□□□□□ -1.23
ATP2C1-224ENST00000533801 CAMK2N1Q7Z7J9 78 aa7.39□□□□□ -1.23
ATP2C1-224ENST00000533801 HMCN2Q8NDA2 5059 aa7.37□□□□□ -1.23
ATP2C1-224ENST00000533801 NDUFAF8A1L188 74 aa7.36□□□□□ -1.23
ATP2C1-224ENST00000533801 KRTAP19-2Q3LHN2 52 aa7.28□□□□□ -1.24
ATP2C1-224ENST00000533801 FLGP20930 4061 aaPredicted RBP7.22□□□□□ -1.25
ATP2C1-224ENST00000533801 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
ATP2C1-224ENST00000533801 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
ATP2C1-224ENST00000533801 MT1HP80294 61 aa6.98□□□□□ -1.29
ATP2C1-224ENST00000533801 PLAC4Q8WY50 150 aa6.97□□□□□ -1.29
ATP2C1-224ENST00000533801 LUZP6Q538Z0 58 aa6.92□□□□□ -1.3
ATP2C1-224ENST00000533801 TNP1P09430 55 aa6.87□□□□□ -1.31
ATP2C1-224ENST00000533801 MT1FP04733 61 aa6.87□□□□□ -1.31
ATP2C1-224ENST00000533801 KRTAP15-1Q3LI76 137 aa6.83□□□□□ -1.32
ATP2C1-224ENST00000533801 MT2AP02795 61 aa6.83□□□□□ -1.32
ATP2C1-224ENST00000533801 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
ATP2C1-224ENST00000533801 A0A0A0MQY5 61 aa6.73□□□□□ -1.33
ATP2C1-224ENST00000533801 SPRR2GQ9BYE4 73 aa6.72□□□□□ -1.33
ATP2C1-224ENST00000533801 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.34
ATP2C1-224ENST00000533801 USH2AO75445 5202 aa6.69□□□□□ -1.34
ATP2C1-224ENST00000533801 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
ATP2C1-224ENST00000533801 FSIP2Q5CZC0 6907 aa6.56□□□□□ -1.36
ATP2C1-224ENST00000533801 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
ATP2C1-224ENST00000533801 MT1BP07438 61 aa6.49□□□□□ -1.37
ATP2C1-224ENST00000533801 KMT2DO14686 5537 aa6.44□□□□□ -1.38
ATP2C1-224ENST00000533801 KRTAP9-3Q9BYQ3 159 aa6.42□□□□□ -1.38
ATP2C1-224ENST00000533801 MT1XP80297 61 aa6.41□□□□□ -1.38
ATP2C1-224ENST00000533801 KRTAP10-5P60370 271 aa6.4□□□□□ -1.39
ATP2C1-224ENST00000533801 KRTAP19-8Q3LI54 63 aa6.4□□□□□ -1.39
ATP2C1-224ENST00000533801 KRTAP10-7P60409 375 aaPredicted RBP6.35□□□□□ -1.39
ATP2C1-224ENST00000533801 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
ATP2C1-224ENST00000533801 LCE2BO14633 110 aa6.31□□□□□ -1.4
ATP2C1-224ENST00000533801 PRO2289Q9P1D8 64 aa6.29□□□□□ -1.4
ATP2C1-224ENST00000533801 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
ATP2C1-224ENST00000533801 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
ATP2C1-224ENST00000533801 LCE2AQ5TA79 106 aaPredicted RBP6.16□□□□□ -1.42
ATP2C1-224ENST00000533801 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
ATP2C1-224ENST00000533801 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
ATP2C1-224ENST00000533801 KRTAP8-1Q8IUC2 63 aa6.12□□□□□ -1.43
ATP2C1-224ENST00000533801 KRTAP19-5Q3LI72 72 aa6.05□□□□□ -1.44
ATP2C1-224ENST00000533801 SSPOA2VEC9 5147 aa5.98□□□□□ -1.45
ATP2C1-224ENST00000533801 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
ATP2C1-224ENST00000533801 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
ATP2C1-224ENST00000533801 MUC12Q9UKN1 5478 aa5.75□□□□□ -1.49
ATP2C1-224ENST00000533801 LCE3CQ5T5A8 94 aa5.75□□□□□ -1.49
ATP2C1-224ENST00000533801 DSTQ03001 7570 aaKnown RBP5.73□□□□□ -1.49
ATP2C1-224ENST00000533801 FCGBPQ9Y6R7 5405 aaPredicted RBP5.71□□□□□ -1.49
ATP2C1-224ENST00000533801 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
ATP2C1-224ENST00000533801 CRCT1Q9UGL9 99 aa5.61□□□□□ -1.51
ATP2C1-224ENST00000533801 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.52
ATP2C1-224ENST00000533801 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
ATP2C1-224ENST00000533801 MT1EP04732 61 aa5.55□□□□□ -1.52
ATP2C1-224ENST00000533801 KRTAP19-6Q3LI70 58 aa5.53□□□□□ -1.52
ATP2C1-224ENST00000533801 MT1LQ93083 61 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms