RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 KRTAP10-6P60371 365 aaPredicted RBP8.56□□□□□ -1.04
CTSB-228ENST00000533455 RPL37P61927 97 aaKnown RBP8.54□□□□□ -1.04
CTSB-228ENST00000533455 KRTAP10-8P60410 259 aa8.51□□□□□ -1.05
CTSB-228ENST00000533455 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
CTSB-228ENST00000533455 ROMO1P60602 79 aa8.49□□□□□ -1.05
CTSB-228ENST00000533455 HSPG2P98160 4391 aa8.49□□□□□ -1.05
CTSB-228ENST00000533455 KRTAP13-4Q3LI77 160 aa8.47□□□□□ -1.05
CTSB-228ENST00000533455 LRP1Q07954 4544 aaKnown RBP8.47□□□□□ -1.05
CTSB-228ENST00000533455 S4R3F8 94 aa8.47□□□□□ -1.05
CTSB-228ENST00000533455 XP32Q5T750 250 aa8.45□□□□□ -1.06
CTSB-228ENST00000533455 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
CTSB-228ENST00000533455 CRIPTQ9P021 101 aa8.42□□□□□ -1.06
CTSB-228ENST00000533455 RYR1P21817 5038 aa8.41□□□□□ -1.06
CTSB-228ENST00000533455 KIAA1109Q2LD37 5005 aa8.38□□□□□ -1.07
CTSB-228ENST00000533455 DMBT1Q9UGM3 2413 aaPredicted RBP8.37□□□□□ -1.07
CTSB-228ENST00000533455 A0A0D9SG42 100 aa8.37□□□□□ -1.07
CTSB-228ENST00000533455 KRTAP17-1Q9BYP8 105 aa8.36□□□□□ -1.07
CTSB-228ENST00000533455 Q5VSD8 79 aa8.34□□□□□ -1.07
CTSB-228ENST00000533455 H3BS24 57 aa8.34□□□□□ -1.07
CTSB-228ENST00000533455 P0C880 135 aa8.34□□□□□ -1.07
CTSB-228ENST00000533455 TPRXLQ17RH7 258 aa8.27□□□□□ -1.09
CTSB-228ENST00000533455 MYCBP2O75592 4640 aa8.24□□□□□ -1.09
CTSB-228ENST00000533455 KRTAP12-2P59991 146 aa8.21□□□□□ -1.1
CTSB-228ENST00000533455 MT1HL1P0DM35 61 aa8.19□□□□□ -1.1
CTSB-228ENST00000533455 KRTAP12-1P59990 96 aa8.17□□□□□ -1.1
CTSB-228ENST00000533455 C10orf95Q9H7T3 257 aa8.14□□□□□ -1.11
CTSB-228ENST00000533455 M0QZ58 72 aa8.12□□□□□ -1.11
CTSB-228ENST00000533455 SPINT4Q6UDR6 99 aa8.09□□□□□ -1.11
CTSB-228ENST00000533455 KRTAP4-5Q9BYR2 181 aa8.07□□□□□ -1.12
CTSB-228ENST00000533455 LPAP08519 4548 aa8□□□□□ -1.13
CTSB-228ENST00000533455 ABCA13Q86UQ4 5058 aa7.99□□□□□ -1.13
CTSB-228ENST00000533455 KRTAP15-1Q3LI76 137 aa7.98□□□□□ -1.13
CTSB-228ENST00000533455 LRP2P98164 4655 aa7.97□□□□□ -1.13
CTSB-228ENST00000533455 BIRC6Q9NR09 4857 aa7.95□□□□□ -1.14
CTSB-228ENST00000533455 HERC2O95714 4834 aa7.9□□□□□ -1.14
CTSB-228ENST00000533455 R4GN34 69 aa7.83□□□□□ -1.16
CTSB-228ENST00000533455 NDUFAF8A1L188 74 aa7.77□□□□□ -1.17
CTSB-228ENST00000533455 SEC61BP60468 96 aaKnown RBP7.76□□□□□ -1.17
CTSB-228ENST00000533455 MUC17Q685J3 4493 aa7.75□□□□□ -1.17
CTSB-228ENST00000533455 J3QL48 77 aa7.71□□□□□ -1.17
CTSB-228ENST00000533455 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.18
CTSB-228ENST00000533455 PCLOQ9Y6V0 5065 aa7.68□□□□□ -1.18
CTSB-228ENST00000533455 KRTAP4-1Q9BYQ7 146 aa7.64□□□□□ -1.19
CTSB-228ENST00000533455 HERC1Q15751 4861 aa7.6□□□□□ -1.19
CTSB-228ENST00000533455 KRTAP19-2Q3LHN2 52 aa7.59□□□□□ -1.19
CTSB-228ENST00000533455 PLAC4Q8WY50 150 aa7.54□□□□□ -1.2
CTSB-228ENST00000533455 PP632Q6XCG6 107 aa7.5□□□□□ -1.21
CTSB-228ENST00000533455 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
CTSB-228ENST00000533455 HMCN2Q8NDA2 5059 aa7.42□□□□□ -1.22
CTSB-228ENST00000533455 FLGP20930 4061 aaPredicted RBP7.36□□□□□ -1.23
CTSB-228ENST00000533455 MUC2Q02817 5179 aa7.36□□□□□ -1.23
CTSB-228ENST00000533455 KRTAP23-1A1A580 65 aa7.26□□□□□ -1.25
CTSB-228ENST00000533455 TNP1P09430 55 aa7.23□□□□□ -1.25
CTSB-228ENST00000533455 LUZP6Q538Z0 58 aa7.21□□□□□ -1.26
CTSB-228ENST00000533455 UBR4Q5T4S7 5183 aa7.16□□□□□ -1.26
CTSB-228ENST00000533455 RNF213Q63HN8 5207 aa7.1□□□□□ -1.27
CTSB-228ENST00000533455 SPRR5A0A1B0GTR4 108 aa7.08□□□□□ -1.28
CTSB-228ENST00000533455 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
CTSB-228ENST00000533455 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
CTSB-228ENST00000533455 FAT4Q6V0I7 4981 aa7.02□□□□□ -1.28
CTSB-228ENST00000533455 KRTAP19-1Q8IUB9 90 aa6.98□□□□□ -1.29
CTSB-228ENST00000533455 A0A0A0MQY5 61 aa6.96□□□□□ -1.29
CTSB-228ENST00000533455 MT1HP80294 61 aa6.82□□□□□ -1.32
CTSB-228ENST00000533455 LCE3AQ5TA76 89 aa6.82□□□□□ -1.32
CTSB-228ENST00000533455 M0R2T5 61 aa6.79□□□□□ -1.32
CTSB-228ENST00000533455 MT2AP02795 61 aa6.77□□□□□ -1.33
CTSB-228ENST00000533455 MT1FP04733 61 aa6.77□□□□□ -1.33
CTSB-228ENST00000533455 KRTAP19-8Q3LI54 63 aa6.73□□□□□ -1.33
CTSB-228ENST00000533455 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
CTSB-228ENST00000533455 KRTAP8-1Q8IUC2 63 aa6.7□□□□□ -1.34
CTSB-228ENST00000533455 KRTAP9-8Q9BYQ0 159 aa6.7□□□□□ -1.34
CTSB-228ENST00000533455 MT1BP07438 61 aa6.61□□□□□ -1.35
CTSB-228ENST00000533455 KRTAP10-5P60370 271 aa6.6□□□□□ -1.35
CTSB-228ENST00000533455 MT1XP80297 61 aa6.59□□□□□ -1.35
CTSB-228ENST00000533455 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
CTSB-228ENST00000533455 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
CTSB-228ENST00000533455 KRTAP9-3Q9BYQ3 159 aa6.42□□□□□ -1.38
CTSB-228ENST00000533455 KRTAP10-7P60409 375 aaPredicted RBP6.39□□□□□ -1.39
CTSB-228ENST00000533455 LCE2AQ5TA79 106 aaPredicted RBP6.35□□□□□ -1.39
CTSB-228ENST00000533455 LCE2DQ5TA82 110 aaPredicted RBP6.35□□□□□ -1.39
CTSB-228ENST00000533455 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.39
CTSB-228ENST00000533455 INE1O15225 51 aa6.33□□□□□ -1.4
CTSB-228ENST00000533455 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
CTSB-228ENST00000533455 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
CTSB-228ENST00000533455 USH2AO75445 5202 aa6.12□□□□□ -1.43
CTSB-228ENST00000533455 LCE2BO14633 110 aa6.11□□□□□ -1.43
CTSB-228ENST00000533455 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
CTSB-228ENST00000533455 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
CTSB-228ENST00000533455 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
CTSB-228ENST00000533455 FSIP2Q5CZC0 6907 aa5.88□□□□□ -1.47
CTSB-228ENST00000533455 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
CTSB-228ENST00000533455 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
CTSB-228ENST00000533455 KMT2DO14686 5537 aa5.84□□□□□ -1.47
CTSB-228ENST00000533455 SSPOA2VEC9 5147 aa5.82□□□□□ -1.48
CTSB-228ENST00000533455 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
CTSB-228ENST00000533455 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
CTSB-228ENST00000533455 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
CTSB-228ENST00000533455 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
CTSB-228ENST00000533455 MT1LQ93083 61 aa5.72□□□□□ -1.49
CTSB-228ENST00000533455 MT1EP04732 61 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms