RNA–Protein interactions for RNA: ENST00000533362.1

PUF60-222, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-222ENST00000533362 KRTAP9-3Q9BYQ3 159 aa10.51□□□□□ -0.73
PUF60-222ENST00000533362 DMAC1Q96GE9 116 aa10.5□□□□□ -0.73
PUF60-222ENST00000533362 KRTAP3-3Q9BYR6 98 aa10.5□□□□□ -0.73
PUF60-222ENST00000533362 FSIP2Q5CZC0 6907 aa10.48□□□□□ -0.73
PUF60-222ENST00000533362 KRTAP9-6A0A140TA67 174 aa10.45□□□□□ -0.74
PUF60-222ENST00000533362 CRCT1Q9UGL9 99 aa10.43□□□□□ -0.74
PUF60-222ENST00000533362 C20orf197Q8N268 126 aa10.42□□□□□ -0.74
PUF60-222ENST00000533362 SNURFQ9Y675 71 aa10.42□□□□□ -0.74
PUF60-222ENST00000533362 USH2AO75445 5202 aa10.36□□□□□ -0.75
PUF60-222ENST00000533362 ACYP2P14621 99 aa10.35□□□□□ -0.75
PUF60-222ENST00000533362 H0YAA0 97 aa10.33□□□□□ -0.76
PUF60-222ENST00000533362 LCE2BO14633 110 aa10.33□□□□□ -0.76
PUF60-222ENST00000533362 COX7CP15954 63 aa10.31□□□□□ -0.76
PUF60-222ENST00000533362 SPANXA2-OT1Q8N9U9 137 aa10.31□□□□□ -0.76
PUF60-222ENST00000533362 CRIPTQ9P021 101 aa10.24□□□□□ -0.77
PUF60-222ENST00000533362 SPTSSBQ8NFR3 76 aa10.23□□□□□ -0.77
PUF60-222ENST00000533362 CHKB-CPT1BH3BT56 60 aa10.2□□□□□ -0.78
PUF60-222ENST00000533362 ANAPC13Q9BS18 74 aa10.19□□□□□ -0.78
PUF60-222ENST00000533362 ADM2Q7Z4H4 148 aa10.17□□□□□ -0.78
PUF60-222ENST00000533362 SSPOA2VEC9 5147 aa10.17□□□□□ -0.78
PUF60-222ENST00000533362 KRTAP19-1Q8IUB9 90 aa10.15□□□□□ -0.78
PUF60-222ENST00000533362 SPRR2GQ9BYE4 73 aa10.14□□□□□ -0.79
PUF60-222ENST00000533362 H7BZZ5 65 aa10.03□□□□□ -0.8
PUF60-222ENST00000533362 Q5VV11 94 aa10.03□□□□□ -0.8
PUF60-222ENST00000533362 KRTAP19-8Q3LI54 63 aa10□□□□□ -0.81
PUF60-222ENST00000533362 KRTAP19-6Q3LI70 58 aa9.97□□□□□ -0.81
PUF60-222ENST00000533362 CYSTM1Q9H1C7 97 aa9.97□□□□□ -0.81
PUF60-222ENST00000533362 COA5Q86WW8 74 aa9.95□□□□□ -0.82
PUF60-222ENST00000533362 P0C880 135 aa9.94□□□□□ -0.82
PUF60-222ENST00000533362 R4GN34 69 aa9.94□□□□□ -0.82
PUF60-222ENST00000533362 KRTAP3-2Q9BYR7 98 aa9.91□□□□□ -0.82
PUF60-222ENST00000533362 CCDC179H3BU77 68 aa9.89□□□□□ -0.83
PUF60-222ENST00000533362 MT1BP07438 61 aa9.89□□□□□ -0.83
PUF60-222ENST00000533362 FCGBPQ9Y6R7 5405 aaPredicted RBP9.89□□□□□ -0.83
PUF60-222ENST00000533362 M0QZ58 72 aa9.85□□□□□ -0.83
PUF60-222ENST00000533362 ATP5EP56381 51 aaPredicted RBP9.8□□□□□ -0.84
PUF60-222ENST00000533362 SEC61GP60059 68 aa9.73□□□□□ -0.85
PUF60-222ENST00000533362 A6NN06 94 aa9.71□□□□□ -0.86
PUF60-222ENST00000533362 PLAC4Q8WY50 150 aa9.69□□□□□ -0.86
PUF60-222ENST00000533362 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.67□□□□□ -0.86
PUF60-222ENST00000533362 SERP1Q9Y6X1 66 aa9.67□□□□□ -0.86
PUF60-222ENST00000533362 LINC01554Q52M75 96 aa9.66□□□□□ -0.86
PUF60-222ENST00000533362 TMEM258P61165 79 aa9.65□□□□□ -0.86
PUF60-222ENST00000533362 KRTAP10-5P60370 271 aa9.63□□□□□ -0.87
PUF60-222ENST00000533362 PRO2289Q9P1D8 64 aa9.56□□□□□ -0.88
PUF60-222ENST00000533362 MACF1Q9UPN3 7388 aaKnown RBP9.53□□□□□ -0.88
PUF60-222ENST00000533362 A0A1B0GU69 56 aa9.48□□□□□ -0.89
PUF60-222ENST00000533362 A0A1B0GU33 70 aa9.44□□□□□ -0.9
PUF60-222ENST00000533362 KRTAP9-7A8MTY7 169 aa9.44□□□□□ -0.9
PUF60-222ENST00000533362 KRTAP13-4Q3LI77 160 aa9.43□□□□□ -0.9
PUF60-222ENST00000533362 MT1XP80297 61 aa9.39□□□□□ -0.91
PUF60-222ENST00000533362 PRR15LQ9BU68 103 aa9.39□□□□□ -0.91
PUF60-222ENST00000533362 SYNE2Q8WXH0 6885 aaKnown RBP9.37□□□□□ -0.91
PUF60-222ENST00000533362 SPATA8Q6RVD6 105 aa9.3□□□□□ -0.92
PUF60-222ENST00000533362 LINC01558Q9Y6Z2 57 aa9.3□□□□□ -0.92
PUF60-222ENST00000533362 A0A0D9SG42 100 aa9.25□□□□□ -0.93
PUF60-222ENST00000533362 SMIM26A0A096LP01 95 aa9.23□□□□□ -0.93
PUF60-222ENST00000533362 KRTAP6-3Q3LI67 103 aa9.22□□□□□ -0.93
PUF60-222ENST00000533362 CAMK2N1Q7Z7J9 78 aa9.22□□□□□ -0.93
PUF60-222ENST00000533362 PCP4P48539 62 aa9.16□□□□□ -0.94
PUF60-222ENST00000533362 KRTAP12-2P59991 146 aa9.16□□□□□ -0.94
PUF60-222ENST00000533362 SPINT4Q6UDR6 99 aa9.12□□□□□ -0.95
PUF60-222ENST00000533362 V9GYY9 64 aa9.1□□□□□ -0.95
PUF60-222ENST00000533362 KRTAP12-1P59990 96 aa9.06□□□□□ -0.96
PUF60-222ENST00000533362 UQCR11O14957 56 aa9.04□□□□□ -0.96
PUF60-222ENST00000533362 A8MU10 97 aa9.02□□□□□ -0.97
PUF60-222ENST00000533362 Q1T7F1 81 aa8.98□□□□□ -0.97
PUF60-222ENST00000533362 KRTAP5-9P26371 169 aa8.95□□□□□ -0.98
PUF60-222ENST00000533362 KRTAP10-7P60409 375 aaPredicted RBP8.95□□□□□ -0.98
PUF60-222ENST00000533362 KRTAP10-12P60413 245 aa8.95□□□□□ -0.98
PUF60-222ENST00000533362 KRTAP8-1Q8IUC2 63 aa8.93□□□□□ -0.98
PUF60-222ENST00000533362 KMT2DO14686 5537 aa8.93□□□□□ -0.98
PUF60-222ENST00000533362 RPS28P62857 69 aaKnown RBP8.9□□□□□ -0.98
PUF60-222ENST00000533362 PSPHP1O15172 72 aa8.87□□□□□ -0.99
PUF60-222ENST00000533362 MIR22HGQ0VDD5 57 aa8.84□□□□□ -0.99
PUF60-222ENST00000533362 MUC12Q9UKN1 5478 aa8.83□□□□□ -1
PUF60-222ENST00000533362 NEBP20929 6669 aa8.82□□□□□ -1
PUF60-222ENST00000533362 KRTAP4-8A0A0G2JLE6 195 aa8.8□□□□□ -1
PUF60-222ENST00000533362 KRTAP4-8Q9BYQ9 185 aa8.8□□□□□ -1
PUF60-222ENST00000533362 SPRR2FQ96RM1 72 aa8.79□□□□□ -1
PUF60-222ENST00000533362 K7ERS5 55 aa8.7□□□□□ -1.02
PUF60-222ENST00000533362 MDN1Q9NU22 5596 aa8.69□□□□□ -1.02
PUF60-222ENST00000533362 A6NED7 52 aa8.65□□□□□ -1.02
PUF60-222ENST00000533362 TNP1P09430 55 aa8.6□□□□□ -1.03
PUF60-222ENST00000533362 C10orf95Q9H7T3 257 aa8.6□□□□□ -1.03
PUF60-222ENST00000533362 SPRR2EP22531 72 aa8.58□□□□□ -1.04
PUF60-222ENST00000533362 SPRR2BP35325 72 aa8.58□□□□□ -1.04
PUF60-222ENST00000533362 SPRR2AP35326 72 aa8.58□□□□□ -1.04
PUF60-222ENST00000533362 LCE1AQ5T7P2 110 aa8.48□□□□□ -1.05
PUF60-222ENST00000533362 KRTAP19-7Q3SYF9 63 aa8.38□□□□□ -1.07
PUF60-222ENST00000533362 KRTAP25-1Q3LHN0 102 aa8.35□□□□□ -1.07
PUF60-222ENST00000533362 KRTAP20-1Q3LI63 56 aa8.35□□□□□ -1.07
PUF60-222ENST00000533362 CDC42SE1Q9NRR8 79 aa8.34□□□□□ -1.07
PUF60-222ENST00000533362 LCE3AQ5TA76 89 aa8.33□□□□□ -1.08
PUF60-222ENST00000533362 MT1EP04732 61 aa8.32□□□□□ -1.08
PUF60-222ENST00000533362 SPRR2DP22532 72 aa8.3□□□□□ -1.08
PUF60-222ENST00000533362 KRTAP19-5Q3LI72 72 aa8.3□□□□□ -1.08
PUF60-222ENST00000533362 KRTAP2-3P0C7H8 128 aa8.25□□□□□ -1.09
PUF60-222ENST00000533362 KRTAP2-4Q9BYR9 128 aa8.25□□□□□ -1.09
PUF60-222ENST00000533362 KRTAP19-3Q7Z4W3 81 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms