RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 TRAV7A0A075B6U4 112 aa11.75□□□□□ -0.53
USP48-214ENST00000532737 KRTAP9-7A8MTY7 169 aa11.73□□□□□ -0.53
USP48-214ENST00000532737 SSPOA2VEC9 5147 aa11.72□□□□□ -0.53
USP48-214ENST00000532737 CSAG1Q6PB30 78 aa11.67□□□□□ -0.54
USP48-214ENST00000532737 KRTAP3-3Q9BYR6 98 aa11.67□□□□□ -0.54
USP48-214ENST00000532737 KRTAP9-3Q9BYQ3 159 aa11.66□□□□□ -0.54
USP48-214ENST00000532737 A8MUN3 132 aa11.64□□□□□ -0.55
USP48-214ENST00000532737 FCGBPQ9Y6R7 5405 aaPredicted RBP11.54□□□□□ -0.56
USP48-214ENST00000532737 SERP2Q8N6R1 65 aa11.53□□□□□ -0.56
USP48-214ENST00000532737 LCE2BO14633 110 aa11.51□□□□□ -0.57
USP48-214ENST00000532737 NDUFC1O43677 76 aa11.49□□□□□ -0.57
USP48-214ENST00000532737 DMAC1Q96GE9 116 aa11.49□□□□□ -0.57
USP48-214ENST00000532737 KRTAP3-2Q9BYR7 98 aa11.49□□□□□ -0.57
USP48-214ENST00000532737 SNURFQ9Y675 71 aa11.49□□□□□ -0.57
USP48-214ENST00000532737 KRTAP19-1Q8IUB9 90 aa11.46□□□□□ -0.57
USP48-214ENST00000532737 C20orf197Q8N268 126 aa11.43□□□□□ -0.58
USP48-214ENST00000532737 ACYP2P14621 99 aa11.29□□□□□ -0.6
USP48-214ENST00000532737 COX7CP15954 63 aa11.29□□□□□ -0.6
USP48-214ENST00000532737 H0YAA0 97 aa11.26□□□□□ -0.61
USP48-214ENST00000532737 SPANXA2-OT1Q8N9U9 137 aa11.24□□□□□ -0.61
USP48-214ENST00000532737 ADM2Q7Z4H4 148 aa11.19□□□□□ -0.62
USP48-214ENST00000532737 SPRR2GQ9BYE4 73 aa11.17□□□□□ -0.62
USP48-214ENST00000532737 KRTAP19-6Q3LI70 58 aa11.16□□□□□ -0.62
USP48-214ENST00000532737 MACF1Q9UPN3 7388 aaKnown RBP11.13□□□□□ -0.63
USP48-214ENST00000532737 ANAPC13Q9BS18 74 aa11.13□□□□□ -0.63
USP48-214ENST00000532737 CRIPTQ9P021 101 aa11.13□□□□□ -0.63
USP48-214ENST00000532737 CYSTM1Q9H1C7 97 aa11.1□□□□□ -0.63
USP48-214ENST00000532737 CHKB-CPT1BH3BT56 60 aa11.08□□□□□ -0.64
USP48-214ENST00000532737 KRTAP19-8Q3LI54 63 aa11.05□□□□□ -0.64
USP48-214ENST00000532737 SYNE2Q8WXH0 6885 aaKnown RBP11.04□□□□□ -0.64
USP48-214ENST00000532737 SPTSSBQ8NFR3 76 aa11.04□□□□□ -0.64
USP48-214ENST00000532737 H7BZZ5 65 aa11.03□□□□□ -0.64
USP48-214ENST00000532737 P0C880 135 aa11.02□□□□□ -0.65
USP48-214ENST00000532737 MT1BP07438 61 aa11□□□□□ -0.65
USP48-214ENST00000532737 Q5VV11 94 aa10.97□□□□□ -0.65
USP48-214ENST00000532737 CCDC179H3BU77 68 aa10.93□□□□□ -0.66
USP48-214ENST00000532737 COA5Q86WW8 74 aa10.92□□□□□ -0.66
USP48-214ENST00000532737 KRTAP6-3Q3LI67 103 aa10.85□□□□□ -0.67
USP48-214ENST00000532737 R4GN34 69 aa10.83□□□□□ -0.68
USP48-214ENST00000532737 M0QZ58 72 aa10.79□□□□□ -0.68
USP48-214ENST00000532737 A6NN06 94 aa10.66□□□□□ -0.7
USP48-214ENST00000532737 KRTAP10-5P60370 271 aa10.63□□□□□ -0.71
USP48-214ENST00000532737 LINC01554Q52M75 96 aa10.62□□□□□ -0.71
USP48-214ENST00000532737 ATP5EP56381 51 aaPredicted RBP10.58□□□□□ -0.72
USP48-214ENST00000532737 PLAC4Q8WY50 150 aa10.57□□□□□ -0.72
USP48-214ENST00000532737 SEC61GP60059 68 aa10.51□□□□□ -0.73
USP48-214ENST00000532737 SERP1Q9Y6X1 66 aa10.5□□□□□ -0.73
USP48-214ENST00000532737 TMEM258P61165 79 aa10.49□□□□□ -0.73
USP48-214ENST00000532737 KRTAP13-4Q3LI77 160 aa10.49□□□□□ -0.73
USP48-214ENST00000532737 NEBP20929 6669 aa10.46□□□□□ -0.73
USP48-214ENST00000532737 MT1XP80297 61 aa10.42□□□□□ -0.74
USP48-214ENST00000532737 MUC12Q9UKN1 5478 aa10.39□□□□□ -0.75
USP48-214ENST00000532737 PRO2289Q9P1D8 64 aa10.35□□□□□ -0.75
USP48-214ENST00000532737 A0A1B0GU33 70 aa10.33□□□□□ -0.76
USP48-214ENST00000532737 A0A1B0GU69 56 aa10.33□□□□□ -0.76
USP48-214ENST00000532737 SPATA8Q6RVD6 105 aa10.27□□□□□ -0.77
USP48-214ENST00000532737 KRTAP20-1Q3LI63 56 aa10.23□□□□□ -0.77
USP48-214ENST00000532737 KRTAP5-9P26371 169 aa10.22□□□□□ -0.77
USP48-214ENST00000532737 A0A0D9SG42 100 aa10.19□□□□□ -0.78
USP48-214ENST00000532737 LINC01558Q9Y6Z2 57 aa10.18□□□□□ -0.78
USP48-214ENST00000532737 PRR15LQ9BU68 103 aa10.13□□□□□ -0.79
USP48-214ENST00000532737 KMT2DO14686 5537 aa10.12□□□□□ -0.79
USP48-214ENST00000532737 MDN1Q9NU22 5596 aa10.06□□□□□ -0.8
USP48-214ENST00000532737 PCP4P48539 62 aa10.06□□□□□ -0.8
USP48-214ENST00000532737 KRTAP12-2P59991 146 aa10.04□□□□□ -0.8
USP48-214ENST00000532737 CAMK2N1Q7Z7J9 78 aa10.04□□□□□ -0.8
USP48-214ENST00000532737 SMIM26A0A096LP01 95 aa10.01□□□□□ -0.81
USP48-214ENST00000532737 KRTAP12-1P59990 96 aa10.01□□□□□ -0.81
USP48-214ENST00000532737 SPINT4Q6UDR6 99 aa10.01□□□□□ -0.81
USP48-214ENST00000532737 A8MU10 97 aa9.99□□□□□ -0.81
USP48-214ENST00000532737 KRTAP10-7P60409 375 aaPredicted RBP9.96□□□□□ -0.82
USP48-214ENST00000532737 KRTAP10-12P60413 245 aa9.89□□□□□ -0.83
USP48-214ENST00000532737 KRTAP2-3P0C7H8 128 aa9.85□□□□□ -0.83
USP48-214ENST00000532737 KRTAP2-4Q9BYR9 128 aa9.85□□□□□ -0.83
USP48-214ENST00000532737 KRTAP4-8A0A0G2JLE6 195 aa9.84□□□□□ -0.83
USP48-214ENST00000532737 KRTAP4-8Q9BYQ9 185 aa9.84□□□□□ -0.83
USP48-214ENST00000532737 UQCR11O14957 56 aa9.82□□□□□ -0.84
USP48-214ENST00000532737 Q1T7F1 81 aa9.81□□□□□ -0.84
USP48-214ENST00000532737 V9GYY9 64 aa9.81□□□□□ -0.84
USP48-214ENST00000532737 KRTAP8-1Q8IUC2 63 aa9.8□□□□□ -0.84
USP48-214ENST00000532737 SPRR2FQ96RM1 72 aa9.77□□□□□ -0.85
USP48-214ENST00000532737 PSPHP1O15172 72 aa9.75□□□□□ -0.85
USP48-214ENST00000532737 SPRR2EP22531 72 aa9.73□□□□□ -0.85
USP48-214ENST00000532737 SPRR2BP35325 72 aa9.73□□□□□ -0.85
USP48-214ENST00000532737 SPRR2AP35326 72 aa9.73□□□□□ -0.85
USP48-214ENST00000532737 RPS28P62857 69 aaKnown RBP9.71□□□□□ -0.86
USP48-214ENST00000532737 MIR22HGQ0VDD5 57 aa9.66□□□□□ -0.86
USP48-214ENST00000532737 LCE1AQ5T7P2 110 aa9.59□□□□□ -0.87
USP48-214ENST00000532737 C10orf95Q9H7T3 257 aa9.54□□□□□ -0.88
USP48-214ENST00000532737 KRTAP2-2Q9BYT5 123 aa9.52□□□□□ -0.89
USP48-214ENST00000532737 KRTAP2-1Q9BYU5 128 aa9.52□□□□□ -0.89
USP48-214ENST00000532737 A6NED7 52 aa9.42□□□□□ -0.9
USP48-214ENST00000532737 SPRR2DP22532 72 aa9.4□□□□□ -0.9
USP48-214ENST00000532737 TNP1P09430 55 aa9.37□□□□□ -0.91
USP48-214ENST00000532737 K7ERS5 55 aa9.34□□□□□ -0.91
USP48-214ENST00000532737 KRTAP19-7Q3SYF9 63 aa9.31□□□□□ -0.92
USP48-214ENST00000532737 LCE3AQ5TA76 89 aa9.21□□□□□ -0.94
USP48-214ENST00000532737 MT1EP04732 61 aa9.2□□□□□ -0.94
USP48-214ENST00000532737 KRTAP19-5Q3LI72 72 aa9.2□□□□□ -0.94
USP48-214ENST00000532737 LCE3BQ5TA77 95 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms