RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 SPANXA2-OT1Q8N9U9 137 aa8.57□□□□□ -1.04
CTSB-222ENST00000531551 LCA10Q71F78 164 aa8.57□□□□□ -1.04
CTSB-222ENST00000531551 ACYP2P14621 99 aa8.53□□□□□ -1.04
CTSB-222ENST00000531551 RPS28P62857 69 aaKnown RBP8.5□□□□□ -1.05
CTSB-222ENST00000531551 KRTAP10-6P60371 365 aaPredicted RBP8.49□□□□□ -1.05
CTSB-222ENST00000531551 CSAG1Q6PB30 78 aa8.47□□□□□ -1.05
CTSB-222ENST00000531551 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
CTSB-222ENST00000531551 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
CTSB-222ENST00000531551 CHKB-CPT1BH3BT56 60 aa8.43□□□□□ -1.06
CTSB-222ENST00000531551 COA5Q86WW8 74 aa8.36□□□□□ -1.07
CTSB-222ENST00000531551 KRTAP9-8Q9BYQ0 159 aa8.35□□□□□ -1.07
CTSB-222ENST00000531551 TMEM258P61165 79 aa8.34□□□□□ -1.07
CTSB-222ENST00000531551 ATP5EP56381 51 aaPredicted RBP8.32□□□□□ -1.08
CTSB-222ENST00000531551 SPTSSBQ8NFR3 76 aa8.31□□□□□ -1.08
CTSB-222ENST00000531551 MT2AP02795 61 aa8.3□□□□□ -1.08
CTSB-222ENST00000531551 KRTAP10-10P60014 251 aa8.27□□□□□ -1.09
CTSB-222ENST00000531551 MT1FP04733 61 aa8.26□□□□□ -1.09
CTSB-222ENST00000531551 ADM2Q7Z4H4 148 aa8.19□□□□□ -1.1
CTSB-222ENST00000531551 PRO0628Q9UI54 55 aa8.17□□□□□ -1.1
CTSB-222ENST00000531551 H0YAA0 97 aa8.17□□□□□ -1.1
CTSB-222ENST00000531551 SERP1Q9Y6X1 66 aa8.09□□□□□ -1.11
CTSB-222ENST00000531551 P0C880 135 aa8.07□□□□□ -1.12
CTSB-222ENST00000531551 KRTAP9-3Q9BYQ3 159 aa8.06□□□□□ -1.12
CTSB-222ENST00000531551 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
CTSB-222ENST00000531551 LCE2DQ5TA82 110 aaPredicted RBP8.03□□□□□ -1.12
CTSB-222ENST00000531551 SEC61GP60059 68 aa8.02□□□□□ -1.13
CTSB-222ENST00000531551 SMIM26A0A096LP01 95 aa8.01□□□□□ -1.13
CTSB-222ENST00000531551 KRTAP9-2Q9BYQ4 174 aa7.98□□□□□ -1.13
CTSB-222ENST00000531551 CRIPTQ9P021 101 aa7.98□□□□□ -1.13
CTSB-222ENST00000531551 R4GN34 69 aa7.94□□□□□ -1.14
CTSB-222ENST00000531551 V9GYY9 64 aa7.94□□□□□ -1.14
CTSB-222ENST00000531551 A0A1B0GU69 56 aa7.94□□□□□ -1.14
CTSB-222ENST00000531551 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
CTSB-222ENST00000531551 LCE2BO14633 110 aa7.92□□□□□ -1.14
CTSB-222ENST00000531551 M0QZ58 72 aa7.91□□□□□ -1.14
CTSB-222ENST00000531551 SPRR2GQ9BYE4 73 aa7.91□□□□□ -1.14
CTSB-222ENST00000531551 LINC01558Q9Y6Z2 57 aa7.87□□□□□ -1.15
CTSB-222ENST00000531551 USH2AO75445 5202 aa7.87□□□□□ -1.15
CTSB-222ENST00000531551 FSIP2Q5CZC0 6907 aa7.85□□□□□ -1.15
CTSB-222ENST00000531551 BRK1Q8WUW1 75 aa7.85□□□□□ -1.15
CTSB-222ENST00000531551 PRR15LQ9BU68 103 aa7.85□□□□□ -1.15
CTSB-222ENST00000531551 LINC01554Q52M75 96 aa7.81□□□□□ -1.16
CTSB-222ENST00000531551 A0A1B0GU33 70 aa7.81□□□□□ -1.16
CTSB-222ENST00000531551 Q5VV11 94 aa7.77□□□□□ -1.17
CTSB-222ENST00000531551 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
CTSB-222ENST00000531551 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
CTSB-222ENST00000531551 Q1T7F1 81 aa7.75□□□□□ -1.17
CTSB-222ENST00000531551 SPATA8Q6RVD6 105 aa7.73□□□□□ -1.17
CTSB-222ENST00000531551 PMAIP1Q13794 54 aa7.71□□□□□ -1.18
CTSB-222ENST00000531551 PSPHP1O15172 72 aa7.7□□□□□ -1.18
CTSB-222ENST00000531551 MT1BP07438 61 aa7.7□□□□□ -1.18
CTSB-222ENST00000531551 SSPOA2VEC9 5147 aa7.7□□□□□ -1.18
CTSB-222ENST00000531551 A0A0D9SG42 100 aa7.65□□□□□ -1.18
CTSB-222ENST00000531551 CRCT1Q9UGL9 99 aa7.64□□□□□ -1.19
CTSB-222ENST00000531551 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
CTSB-222ENST00000531551 UQCR11O14957 56 aa7.6□□□□□ -1.19
CTSB-222ENST00000531551 A8MU10 97 aa7.55□□□□□ -1.2
CTSB-222ENST00000531551 A6NN06 94 aa7.53□□□□□ -1.2
CTSB-222ENST00000531551 KRTAP9-6A0A140TA67 174 aa7.52□□□□□ -1.21
CTSB-222ENST00000531551 KRTAP19-6Q3LI70 58 aa7.52□□□□□ -1.21
CTSB-222ENST00000531551 SPINT4Q6UDR6 99 aa7.51□□□□□ -1.21
CTSB-222ENST00000531551 MIR22HGQ0VDD5 57 aa7.49□□□□□ -1.21
CTSB-222ENST00000531551 A6NED7 52 aa7.47□□□□□ -1.21
CTSB-222ENST00000531551 KRTAP12-1P59990 96 aa7.43□□□□□ -1.22
CTSB-222ENST00000531551 KTN1-AS1Q86SY8 53 aa7.43□□□□□ -1.22
CTSB-222ENST00000531551 KRTAP12-2P59991 146 aa7.41□□□□□ -1.22
CTSB-222ENST00000531551 CAMK2N1Q7Z7J9 78 aa7.41□□□□□ -1.22
CTSB-222ENST00000531551 FCGBPQ9Y6R7 5405 aaPredicted RBP7.4□□□□□ -1.22
CTSB-222ENST00000531551 KRTAP10-5P60370 271 aa7.4□□□□□ -1.23
CTSB-222ENST00000531551 MT1XP80297 61 aa7.37□□□□□ -1.23
CTSB-222ENST00000531551 PRO2289Q9P1D8 64 aa7.37□□□□□ -1.23
CTSB-222ENST00000531551 K7ERS5 55 aa7.24□□□□□ -1.25
CTSB-222ENST00000531551 CDC42SE1Q9NRR8 79 aa7.23□□□□□ -1.25
CTSB-222ENST00000531551 MACF1Q9UPN3 7388 aaKnown RBP7.15□□□□□ -1.27
CTSB-222ENST00000531551 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
CTSB-222ENST00000531551 KRTAP10-7P60409 375 aaPredicted RBP7.08□□□□□ -1.28
CTSB-222ENST00000531551 C10orf95Q9H7T3 257 aa7.07□□□□□ -1.28
CTSB-222ENST00000531551 KMT2DO14686 5537 aa7.02□□□□□ -1.29
CTSB-222ENST00000531551 SYNE2Q8WXH0 6885 aaKnown RBP6.99□□□□□ -1.29
CTSB-222ENST00000531551 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
CTSB-222ENST00000531551 H3BS24 57 aa6.96□□□□□ -1.3
CTSB-222ENST00000531551 TNP1P09430 55 aa6.95□□□□□ -1.3
CTSB-222ENST00000531551 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
CTSB-222ENST00000531551 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
CTSB-222ENST00000531551 PRAC1Q96KF2 57 aa6.92□□□□□ -1.3
CTSB-222ENST00000531551 ROMO1P60602 79 aa6.85□□□□□ -1.31
CTSB-222ENST00000531551 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
CTSB-222ENST00000531551 KRTAP9-7A8MTY7 169 aa6.83□□□□□ -1.32
CTSB-222ENST00000531551 KRTAP25-1Q3LHN0 102 aa6.8□□□□□ -1.32
CTSB-222ENST00000531551 KRTAP6-3Q3LI67 103 aa6.77□□□□□ -1.33
CTSB-222ENST00000531551 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
CTSB-222ENST00000531551 SPRR2FQ96RM1 72 aa6.7□□□□□ -1.34
CTSB-222ENST00000531551 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
CTSB-222ENST00000531551 MUC12Q9UKN1 5478 aa6.67□□□□□ -1.34
CTSB-222ENST00000531551 KRTAP19-5Q3LI72 72 aa6.59□□□□□ -1.35
CTSB-222ENST00000531551 KRTAP19-7Q3SYF9 63 aa6.57□□□□□ -1.36
CTSB-222ENST00000531551 MDN1Q9NU22 5596 aa6.56□□□□□ -1.36
CTSB-222ENST00000531551 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
CTSB-222ENST00000531551 MT1EP04732 61 aa6.49□□□□□ -1.37
CTSB-222ENST00000531551 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms