RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 LCA10Q71F78 164 aa9.28□□□□□ -0.92
SMPD1-205ENST00000531303 LCE2AQ5TA79 106 aaPredicted RBP9.23□□□□□ -0.93
SMPD1-205ENST00000531303 TMEM258P61165 79 aa9.2□□□□□ -0.94
SMPD1-205ENST00000531303 KRTAP3-3Q9BYR6 98 aa9.19□□□□□ -0.94
SMPD1-205ENST00000531303 CHKB-CPT1BH3BT56 60 aa9.18□□□□□ -0.94
SMPD1-205ENST00000531303 ATP5EP56381 51 aaPredicted RBP9.15□□□□□ -0.94
SMPD1-205ENST00000531303 CSAG1Q6PB30 78 aa9.15□□□□□ -0.94
SMPD1-205ENST00000531303 COA5Q86WW8 74 aa9.15□□□□□ -0.94
SMPD1-205ENST00000531303 KRTAP10-6P60371 365 aaPredicted RBP9.09□□□□□ -0.95
SMPD1-205ENST00000531303 SPTSSBQ8NFR3 76 aa9.03□□□□□ -0.96
SMPD1-205ENST00000531303 LORP23490 312 aaPredicted RBP9.02□□□□□ -0.96
SMPD1-205ENST00000531303 KRTAP9-8Q9BYQ0 159 aa8.96□□□□□ -0.97
SMPD1-205ENST00000531303 MT2AP02795 61 aa8.93□□□□□ -0.98
SMPD1-205ENST00000531303 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
SMPD1-205ENST00000531303 ADM2Q7Z4H4 148 aa8.89□□□□□ -0.99
SMPD1-205ENST00000531303 KRTAP10-10P60014 251 aa8.88□□□□□ -0.99
SMPD1-205ENST00000531303 MT1FP04733 61 aa8.87□□□□□ -0.99
SMPD1-205ENST00000531303 H0YAA0 97 aa8.83□□□□□ -1
SMPD1-205ENST00000531303 KRTAP3-2Q9BYR7 98 aa8.78□□□□□ -1
SMPD1-205ENST00000531303 P0C880 135 aa8.77□□□□□ -1.01
SMPD1-205ENST00000531303 SEC61GP60059 68 aa8.72□□□□□ -1.01
SMPD1-205ENST00000531303 RPS28P62857 69 aaKnown RBP8.7□□□□□ -1.02
SMPD1-205ENST00000531303 A0A1B0GU69 56 aa8.67□□□□□ -1.02
SMPD1-205ENST00000531303 KRTAP9-3Q9BYQ3 159 aa8.65□□□□□ -1.02
SMPD1-205ENST00000531303 LINC01558Q9Y6Z2 57 aa8.65□□□□□ -1.02
SMPD1-205ENST00000531303 SMIM26A0A096LP01 95 aa8.64□□□□□ -1.03
SMPD1-205ENST00000531303 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
SMPD1-205ENST00000531303 PRR15LQ9BU68 103 aa8.57□□□□□ -1.04
SMPD1-205ENST00000531303 R4GN34 69 aa8.57□□□□□ -1.04
SMPD1-205ENST00000531303 M0QZ58 72 aa8.57□□□□□ -1.04
SMPD1-205ENST00000531303 KRTAP19-1Q8IUB9 90 aa8.55□□□□□ -1.04
SMPD1-205ENST00000531303 Q1T7F1 81 aa8.54□□□□□ -1.04
SMPD1-205ENST00000531303 V9GYY9 64 aa8.54□□□□□ -1.04
SMPD1-205ENST00000531303 A0A1B0GU33 70 aa8.52□□□□□ -1.05
SMPD1-205ENST00000531303 LCE2DQ5TA82 110 aaPredicted RBP8.52□□□□□ -1.05
SMPD1-205ENST00000531303 SPRR2GQ9BYE4 73 aa8.51□□□□□ -1.05
SMPD1-205ENST00000531303 LCE2BO14633 110 aa8.5□□□□□ -1.05
SMPD1-205ENST00000531303 PSPHP1O15172 72 aa8.5□□□□□ -1.05
SMPD1-205ENST00000531303 KRTAP13-4Q3LI77 160 aa8.46□□□□□ -1.05
SMPD1-205ENST00000531303 LINC01554Q52M75 96 aa8.46□□□□□ -1.05
SMPD1-205ENST00000531303 KRTAP9-2Q9BYQ4 174 aa8.44□□□□□ -1.06
SMPD1-205ENST00000531303 SPATA8Q6RVD6 105 aa8.43□□□□□ -1.06
SMPD1-205ENST00000531303 Q5VV11 94 aa8.37□□□□□ -1.07
SMPD1-205ENST00000531303 KRTAP19-8Q3LI54 63 aa8.36□□□□□ -1.07
SMPD1-205ENST00000531303 USH2AO75445 5202 aa8.35□□□□□ -1.07
SMPD1-205ENST00000531303 A0A0D9SG42 100 aa8.33□□□□□ -1.08
SMPD1-205ENST00000531303 UQCR11O14957 56 aa8.31□□□□□ -1.08
SMPD1-205ENST00000531303 MT1BP07438 61 aa8.3□□□□□ -1.08
SMPD1-205ENST00000531303 FSIP2Q5CZC0 6907 aa8.27□□□□□ -1.09
SMPD1-205ENST00000531303 A8MU10 97 aa8.26□□□□□ -1.09
SMPD1-205ENST00000531303 A6NED7 52 aa8.22□□□□□ -1.09
SMPD1-205ENST00000531303 PLAC4Q8WY50 150 aa8.22□□□□□ -1.09
SMPD1-205ENST00000531303 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.09
SMPD1-205ENST00000531303 SSPOA2VEC9 5147 aa8.16□□□□□ -1.1
SMPD1-205ENST00000531303 A6NN06 94 aa8.16□□□□□ -1.1
SMPD1-205ENST00000531303 SPINT4Q6UDR6 99 aa8.15□□□□□ -1.1
SMPD1-205ENST00000531303 KRTAP12-1P59990 96 aa8.11□□□□□ -1.11
SMPD1-205ENST00000531303 KRTAP12-2P59991 146 aa8.08□□□□□ -1.12
SMPD1-205ENST00000531303 CRCT1Q9UGL9 99 aa8.08□□□□□ -1.12
SMPD1-205ENST00000531303 KRTAP19-6Q3LI70 58 aa8.02□□□□□ -1.13
SMPD1-205ENST00000531303 CAMK2N1Q7Z7J9 78 aa8.01□□□□□ -1.13
SMPD1-205ENST00000531303 CDC42SE1Q9NRR8 79 aa7.97□□□□□ -1.13
SMPD1-205ENST00000531303 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
SMPD1-205ENST00000531303 MT1XP80297 61 aa7.94□□□□□ -1.14
SMPD1-205ENST00000531303 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
SMPD1-205ENST00000531303 K7ERS5 55 aa7.91□□□□□ -1.14
SMPD1-205ENST00000531303 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
SMPD1-205ENST00000531303 BRK1Q8WUW1 75 aa7.86□□□□□ -1.15
SMPD1-205ENST00000531303 FCGBPQ9Y6R7 5405 aaPredicted RBP7.85□□□□□ -1.15
SMPD1-205ENST00000531303 C10orf95Q9H7T3 257 aa7.71□□□□□ -1.18
SMPD1-205ENST00000531303 KRTAP10-7P60409 375 aaPredicted RBP7.63□□□□□ -1.19
SMPD1-205ENST00000531303 MACF1Q9UPN3 7388 aaKnown RBP7.54□□□□□ -1.2
SMPD1-205ENST00000531303 TNP1P09430 55 aa7.53□□□□□ -1.2
SMPD1-205ENST00000531303 KRTAP10-12P60413 245 aa7.52□□□□□ -1.21
SMPD1-205ENST00000531303 ROMO1P60602 79 aa7.51□□□□□ -1.21
SMPD1-205ENST00000531303 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.49□□□□□ -1.21
SMPD1-205ENST00000531303 SVIPQ8NHG7 77 aa7.49□□□□□ -1.21
SMPD1-205ENST00000531303 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
SMPD1-205ENST00000531303 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
SMPD1-205ENST00000531303 KMT2DO14686 5537 aa7.44□□□□□ -1.22
SMPD1-205ENST00000531303 PRO0628Q9UI54 55 aa7.43□□□□□ -1.22
SMPD1-205ENST00000531303 PMAIP1Q13794 54 aa7.41□□□□□ -1.22
SMPD1-205ENST00000531303 KRTAP25-1Q3LHN0 102 aa7.41□□□□□ -1.22
SMPD1-205ENST00000531303 SYNE2Q8WXH0 6885 aaKnown RBP7.36□□□□□ -1.23
SMPD1-205ENST00000531303 KRTAP8-1Q8IUC2 63 aa7.33□□□□□ -1.24
SMPD1-205ENST00000531303 LCE3AQ5TA76 89 aa7.3□□□□□ -1.24
SMPD1-205ENST00000531303 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
SMPD1-205ENST00000531303 KRTAP6-3Q3LI67 103 aa7.19□□□□□ -1.26
SMPD1-205ENST00000531303 SPRR2FQ96RM1 72 aa7.16□□□□□ -1.26
SMPD1-205ENST00000531303 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
SMPD1-205ENST00000531303 KRTAP5-9P26371 169 aa7.11□□□□□ -1.27
SMPD1-205ENST00000531303 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
SMPD1-205ENST00000531303 KRTAP19-7Q3SYF9 63 aa7.09□□□□□ -1.27
SMPD1-205ENST00000531303 PP632Q6XCG6 107 aa7.05□□□□□ -1.28
SMPD1-205ENST00000531303 PRAC1Q96KF2 57 aa7.02□□□□□ -1.29
SMPD1-205ENST00000531303 KRTAP12-3P60328 96 aa7□□□□□ -1.29
SMPD1-205ENST00000531303 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
SMPD1-205ENST00000531303 MT1EP04732 61 aa6.99□□□□□ -1.29
SMPD1-205ENST00000531303 KTN1-AS1Q86SY8 53 aa6.94□□□□□ -1.3
SMPD1-205ENST00000531303 SPRR2EP22531 72 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms