RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 CHKB-CPT1BH3BT56 60 aa7.23□□□□□ -1.25
NXF1-207ENST00000530875 LINC01558Q9Y6Z2 57 aa7.23□□□□□ -1.25
NXF1-207ENST00000530875 UBR4Q5T4S7 5183 aa7.21□□□□□ -1.25
NXF1-207ENST00000530875 MUC2Q02817 5179 aa7.14□□□□□ -1.27
NXF1-207ENST00000530875 A6NED7 52 aa7.1□□□□□ -1.27
NXF1-207ENST00000530875 RNF213Q63HN8 5207 aa7.09□□□□□ -1.27
NXF1-207ENST00000530875 A8MU10 97 aa7.06□□□□□ -1.28
NXF1-207ENST00000530875 RBM12B-AS1Q9P1G2 102 aa7.05□□□□□ -1.28
NXF1-207ENST00000530875 COX6B2Q6YFQ2 88 aa7.05□□□□□ -1.28
NXF1-207ENST00000530875 A0A1B0GU69 56 aa7.03□□□□□ -1.28
NXF1-207ENST00000530875 LCA10Q71F78 164 aa7.03□□□□□ -1.28
NXF1-207ENST00000530875 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
NXF1-207ENST00000530875 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
NXF1-207ENST00000530875 KRTAP19-2Q3LHN2 52 aa6.99□□□□□ -1.29
NXF1-207ENST00000530875 SPTSSBQ8NFR3 76 aa6.97□□□□□ -1.29
NXF1-207ENST00000530875 H1FX-AS1Q4G0G2 97 aa6.93□□□□□ -1.3
NXF1-207ENST00000530875 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
NXF1-207ENST00000530875 SEC61GP60059 68 aa6.88□□□□□ -1.31
NXF1-207ENST00000530875 PMAIP1Q13794 54 aa6.87□□□□□ -1.31
NXF1-207ENST00000530875 UQCR11O14957 56 aa6.86□□□□□ -1.31
NXF1-207ENST00000530875 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
NXF1-207ENST00000530875 S4R3F8 94 aa6.84□□□□□ -1.31
NXF1-207ENST00000530875 SPATA8Q6RVD6 105 aa6.84□□□□□ -1.32
NXF1-207ENST00000530875 MIR22HGQ0VDD5 57 aa6.83□□□□□ -1.32
NXF1-207ENST00000530875 FLGP20930 4061 aaPredicted RBP6.82□□□□□ -1.32
NXF1-207ENST00000530875 MT1HP80294 61 aa6.8□□□□□ -1.32
NXF1-207ENST00000530875 A6NN06 94 aa6.79□□□□□ -1.32
NXF1-207ENST00000530875 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
NXF1-207ENST00000530875 M0R2T5 61 aa6.72□□□□□ -1.33
NXF1-207ENST00000530875 A0A1B0GU33 70 aa6.71□□□□□ -1.34
NXF1-207ENST00000530875 CSAG1Q6PB30 78 aa6.71□□□□□ -1.34
NXF1-207ENST00000530875 H0YAA0 97 aa6.68□□□□□ -1.34
NXF1-207ENST00000530875 KTN1-AS1Q86SY8 53 aa6.67□□□□□ -1.34
NXF1-207ENST00000530875 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.34
NXF1-207ENST00000530875 KRTAP10-6P60371 365 aaPredicted RBP6.6□□□□□ -1.35
NXF1-207ENST00000530875 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
NXF1-207ENST00000530875 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
NXF1-207ENST00000530875 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
NXF1-207ENST00000530875 P0C880 135 aa6.51□□□□□ -1.37
NXF1-207ENST00000530875 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
NXF1-207ENST00000530875 KRTAP13-4Q3LI77 160 aa6.5□□□□□ -1.37
NXF1-207ENST00000530875 MT2AP02795 61 aa6.48□□□□□ -1.37
NXF1-207ENST00000530875 PRAC1Q96KF2 57 aa6.46□□□□□ -1.38
NXF1-207ENST00000530875 K7ERS5 55 aa6.44□□□□□ -1.38
NXF1-207ENST00000530875 MT1FP04733 61 aa6.44□□□□□ -1.38
NXF1-207ENST00000530875 A0A0D9SG42 100 aa6.43□□□□□ -1.38
NXF1-207ENST00000530875 KRTAP10-10P60014 251 aa6.42□□□□□ -1.38
NXF1-207ENST00000530875 M0QZ58 72 aa6.32□□□□□ -1.4
NXF1-207ENST00000530875 CRIPTQ9P021 101 aa6.31□□□□□ -1.4
NXF1-207ENST00000530875 R4GN34 69 aa6.3□□□□□ -1.4
NXF1-207ENST00000530875 KRTAP9-3Q9BYQ3 159 aa6.28□□□□□ -1.4
NXF1-207ENST00000530875 KRTAP12-2P59991 146 aa6.26□□□□□ -1.41
NXF1-207ENST00000530875 KRTAP19-1Q8IUB9 90 aa6.25□□□□□ -1.41
NXF1-207ENST00000530875 ROMO1P60602 79 aa6.25□□□□□ -1.41
NXF1-207ENST00000530875 KRTAP12-1P59990 96 aa6.24□□□□□ -1.41
NXF1-207ENST00000530875 SPINT4Q6UDR6 99 aa6.24□□□□□ -1.41
NXF1-207ENST00000530875 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
NXF1-207ENST00000530875 LINC01554Q52M75 96 aa6.2□□□□□ -1.42
NXF1-207ENST00000530875 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
NXF1-207ENST00000530875 LCE2BO14633 110 aa6.15□□□□□ -1.43
NXF1-207ENST00000530875 KRTAP19-8Q3LI54 63 aa6.1□□□□□ -1.43
NXF1-207ENST00000530875 LCE2DQ5TA82 110 aaPredicted RBP6.1□□□□□ -1.43
NXF1-207ENST00000530875 MT1BP07438 61 aa6.05□□□□□ -1.44
NXF1-207ENST00000530875 USH2AO75445 5202 aa6.01□□□□□ -1.45
NXF1-207ENST00000530875 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
NXF1-207ENST00000530875 KRTAP9-2Q9BYQ4 174 aa5.99□□□□□ -1.45
NXF1-207ENST00000530875 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
NXF1-207ENST00000530875 FSIP2Q5CZC0 6907 aa5.93□□□□□ -1.46
NXF1-207ENST00000530875 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
NXF1-207ENST00000530875 SSPOA2VEC9 5147 aa5.85□□□□□ -1.47
NXF1-207ENST00000530875 MT1XP80297 61 aa5.82□□□□□ -1.48
NXF1-207ENST00000530875 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
NXF1-207ENST00000530875 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
NXF1-207ENST00000530875 PRO2289Q9P1D8 64 aa5.76□□□□□ -1.49
NXF1-207ENST00000530875 CRCT1Q9UGL9 99 aa5.74□□□□□ -1.49
NXF1-207ENST00000530875 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
NXF1-207ENST00000530875 TNP1P09430 55 aa5.62□□□□□ -1.51
NXF1-207ENST00000530875 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
NXF1-207ENST00000530875 KRTAP9-6A0A140TA67 174 aa5.59□□□□□ -1.51
NXF1-207ENST00000530875 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
NXF1-207ENST00000530875 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
NXF1-207ENST00000530875 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
NXF1-207ENST00000530875 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
NXF1-207ENST00000530875 MACF1Q9UPN3 7388 aaKnown RBP5.44□□□□□ -1.54
NXF1-207ENST00000530875 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
NXF1-207ENST00000530875 KRTAP4-8Q9BYQ9 185 aa5.42□□□□□ -1.54
NXF1-207ENST00000530875 KMT2DO14686 5537 aa5.41□□□□□ -1.54
NXF1-207ENST00000530875 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
NXF1-207ENST00000530875 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
NXF1-207ENST00000530875 SYNE2Q8WXH0 6885 aaKnown RBP5.32□□□□□ -1.56
NXF1-207ENST00000530875 NDUFAF8A1L188 74 aa5.31□□□□□ -1.56
NXF1-207ENST00000530875 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
NXF1-207ENST00000530875 H3BS24 57 aa5.21□□□□□ -1.57
NXF1-207ENST00000530875 KRTAP19-5Q3LI72 72 aa5.21□□□□□ -1.57
NXF1-207ENST00000530875 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
NXF1-207ENST00000530875 KRTAP12-3P60328 96 aa5.15□□□□□ -1.58
NXF1-207ENST00000530875 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.58
NXF1-207ENST00000530875 KRTAP5-9P26371 169 aa5.13□□□□□ -1.59
NXF1-207ENST00000530875 KRTAP6-3Q3LI67 103 aa5.13□□□□□ -1.59
NXF1-207ENST00000530875 LUZP6Q538Z0 58 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms