RNA–Protein interactions for RNA: ENST00000530342.2

KDM2A-212, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-212ENST00000530342 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
KDM2A-212ENST00000530342 A0A1B0GU69 56 aa5.54□□□□□ -1.52
KDM2A-212ENST00000530342 A8MUU9 505 aa5.54□□□□□ -1.52
KDM2A-212ENST00000530342 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
KDM2A-212ENST00000530342 C20orf166-AS1Q96NR2 134 aa5.52□□□□□ -1.53
KDM2A-212ENST00000530342 LRP1Q07954 4544 aaKnown RBP5.51□□□□□ -1.53
KDM2A-212ENST00000530342 KRTAP10-4P60372 401 aaPredicted RBP5.51□□□□□ -1.53
KDM2A-212ENST00000530342 MYCBP2O75592 4640 aa5.5□□□□□ -1.53
KDM2A-212ENST00000530342 UQCR11O14957 56 aa5.48□□□□□ -1.53
KDM2A-212ENST00000530342 HERC2O95714 4834 aa5.48□□□□□ -1.53
KDM2A-212ENST00000530342 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
KDM2A-212ENST00000530342 LINC00304Q8N9R0 145 aa5.46□□□□□ -1.54
KDM2A-212ENST00000530342 ABCA13Q86UQ4 5058 aa5.46□□□□□ -1.54
KDM2A-212ENST00000530342 H0YAA0 97 aa5.43□□□□□ -1.54
KDM2A-212ENST00000530342 RPS29P62273 56 aaKnown RBP5.4□□□□□ -1.54
KDM2A-212ENST00000530342 LPAP08519 4548 aa5.37□□□□□ -1.55
KDM2A-212ENST00000530342 SEC61BP60468 96 aaKnown RBP5.37□□□□□ -1.55
KDM2A-212ENST00000530342 PCLOQ9Y6V0 5065 aa5.36□□□□□ -1.55
KDM2A-212ENST00000530342 SPINK1P00995 79 aa5.36□□□□□ -1.55
KDM2A-212ENST00000530342 K7ERS5 55 aa5.35□□□□□ -1.55
KDM2A-212ENST00000530342 MT1HL1P0DM35 61 aa5.34□□□□□ -1.55
KDM2A-212ENST00000530342 KRTAP10-8P60410 259 aa5.34□□□□□ -1.55
KDM2A-212ENST00000530342 C9orf92A6NGG3 77 aa5.31□□□□□ -1.56
KDM2A-212ENST00000530342 KRTAP3-3Q9BYR6 98 aa5.26□□□□□ -1.57
KDM2A-212ENST00000530342 HERC1Q15751 4861 aa5.26□□□□□ -1.57
KDM2A-212ENST00000530342 H1FX-AS1Q4G0G2 97 aa5.24□□□□□ -1.57
KDM2A-212ENST00000530342 KRTAP10-6P60371 365 aaPredicted RBP5.22□□□□□ -1.57
KDM2A-212ENST00000530342 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
KDM2A-212ENST00000530342 KRTAP3-2Q9BYR7 98 aa5.2□□□□□ -1.58
KDM2A-212ENST00000530342 KRTAP13-4Q3LI77 160 aa5.19□□□□□ -1.58
KDM2A-212ENST00000530342 A0A1B0GU33 70 aa5.18□□□□□ -1.58
KDM2A-212ENST00000530342 COX6B2Q6YFQ2 88 aa5.17□□□□□ -1.58
KDM2A-212ENST00000530342 C10orf95Q9H7T3 257 aa5.17□□□□□ -1.58
KDM2A-212ENST00000530342 LRP2P98164 4655 aa5.13□□□□□ -1.59
KDM2A-212ENST00000530342 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
KDM2A-212ENST00000530342 TPRXLQ17RH7 258 aa5.11□□□□□ -1.59
KDM2A-212ENST00000530342 XP32Q5T750 250 aa5.05□□□□□ -1.6
KDM2A-212ENST00000530342 RPL37P61927 97 aaKnown RBP5□□□□□ -1.61
KDM2A-212ENST00000530342 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
KDM2A-212ENST00000530342 UBR4Q5T4S7 5183 aa4.99□□□□□ -1.61
KDM2A-212ENST00000530342 KRTAP12-2P59991 146 aa4.97□□□□□ -1.61
KDM2A-212ENST00000530342 RNF213Q63HN8 5207 aa4.95□□□□□ -1.62
KDM2A-212ENST00000530342 KRTAP12-1P59990 96 aa4.92□□□□□ -1.62
KDM2A-212ENST00000530342 A0A0D9SG42 100 aa4.92□□□□□ -1.62
KDM2A-212ENST00000530342 MUC2Q02817 5179 aa4.9□□□□□ -1.62
KDM2A-212ENST00000530342 S4R3F8 94 aa4.9□□□□□ -1.62
KDM2A-212ENST00000530342 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.63
KDM2A-212ENST00000530342 KRTAP4-1Q9BYQ7 146 aa4.84□□□□□ -1.64
KDM2A-212ENST00000530342 CAMK2N1Q7Z7J9 78 aa4.79□□□□□ -1.64
KDM2A-212ENST00000530342 M0R2T5 61 aa4.78□□□□□ -1.64
KDM2A-212ENST00000530342 KRTAP19-2Q3LHN2 52 aa4.77□□□□□ -1.65
KDM2A-212ENST00000530342 FAT4Q6V0I7 4981 aa4.72□□□□□ -1.65
KDM2A-212ENST00000530342 LORP23490 312 aaPredicted RBP4.71□□□□□ -1.66
KDM2A-212ENST00000530342 M0QZ58 72 aa4.7□□□□□ -1.66
KDM2A-212ENST00000530342 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
KDM2A-212ENST00000530342 R4GN34 69 aa4.64□□□□□ -1.67
KDM2A-212ENST00000530342 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
KDM2A-212ENST00000530342 LCE2CQ5TA81 110 aa4.54□□□□□ -1.68
KDM2A-212ENST00000530342 MT1HP80294 61 aa4.53□□□□□ -1.68
KDM2A-212ENST00000530342 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
KDM2A-212ENST00000530342 FSIP2Q5CZC0 6907 aa4.41□□□□□ -1.7
KDM2A-212ENST00000530342 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.7
KDM2A-212ENST00000530342 LCE2AQ5TA79 106 aaPredicted RBP4.39□□□□□ -1.71
KDM2A-212ENST00000530342 PP632Q6XCG6 107 aa4.33□□□□□ -1.72
KDM2A-212ENST00000530342 MT2AP02795 61 aa4.32□□□□□ -1.72
KDM2A-212ENST00000530342 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
KDM2A-212ENST00000530342 MT1FP04733 61 aa4.31□□□□□ -1.72
KDM2A-212ENST00000530342 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
KDM2A-212ENST00000530342 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
KDM2A-212ENST00000530342 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
KDM2A-212ENST00000530342 INE1O15225 51 aa4.17□□□□□ -1.74
KDM2A-212ENST00000530342 USH2AO75445 5202 aa4.17□□□□□ -1.74
KDM2A-212ENST00000530342 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.75
KDM2A-212ENST00000530342 KRTAP9-3Q9BYQ3 159 aa4.14□□□□□ -1.75
KDM2A-212ENST00000530342 LCE2BO14633 110 aa4.11□□□□□ -1.75
KDM2A-212ENST00000530342 TNP1P09430 55 aa4.11□□□□□ -1.75
KDM2A-212ENST00000530342 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
KDM2A-212ENST00000530342 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
KDM2A-212ENST00000530342 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
KDM2A-212ENST00000530342 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
KDM2A-212ENST00000530342 LCE2DQ5TA82 110 aaPredicted RBP4.01□□□□□ -1.77
KDM2A-212ENST00000530342 MT1XP80297 61 aa4.01□□□□□ -1.77
KDM2A-212ENST00000530342 MT1BP07438 61 aa4.01□□□□□ -1.77
KDM2A-212ENST00000530342 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
KDM2A-212ENST00000530342 CRCT1Q9UGL9 99 aa3.97□□□□□ -1.77
KDM2A-212ENST00000530342 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
KDM2A-212ENST00000530342 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
KDM2A-212ENST00000530342 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
KDM2A-212ENST00000530342 FCGBPQ9Y6R7 5405 aaPredicted RBP3.86□□□□□ -1.79
KDM2A-212ENST00000530342 KMT2DO14686 5537 aa3.83□□□□□ -1.8
KDM2A-212ENST00000530342 KRTAP19-6Q3LI70 58 aa3.81□□□□□ -1.8
KDM2A-212ENST00000530342 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
KDM2A-212ENST00000530342 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
KDM2A-212ENST00000530342 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
KDM2A-212ENST00000530342 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
KDM2A-212ENST00000530342 KRTAP4-8A0A0G2JLE6 195 aa3.7□□□□□ -1.82
KDM2A-212ENST00000530342 KRTAP4-8Q9BYQ9 185 aa3.7□□□□□ -1.82
KDM2A-212ENST00000530342 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
KDM2A-212ENST00000530342 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
KDM2A-212ENST00000530342 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms