RNA–Protein interactions for RNA: ENST00000530262.5

MACF1-229, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 6,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-229ENST00000530262 STARD9Q9P2P6 4700 aa3.46□□□□□ -1.86
MACF1-229ENST00000530262 DNAH5Q8TE73 4624 aa3.44□□□□□ -1.86
MACF1-229ENST00000530262 CMYA5Q8N3K9 4069 aa3.42□□□□□ -1.86
MACF1-229ENST00000530262 DNAH10Q8IVF4 4471 aa3.42□□□□□ -1.86
MACF1-229ENST00000530262 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
MACF1-229ENST00000530262 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.86
MACF1-229ENST00000530262 VPS13DQ5THJ4 4388 aa3.39□□□□□ -1.87
MACF1-229ENST00000530262 DNAH11Q96DT5 4516 aa3.38□□□□□ -1.87
MACF1-229ENST00000530262 KMT2AQ03164 3969 aa3.37□□□□□ -1.87
MACF1-229ENST00000530262 DNAH3Q8TD57 4116 aa3.33□□□□□ -1.88
MACF1-229ENST00000530262 DYNC1H1Q14204 4646 aaKnown RBP3.33□□□□□ -1.88
MACF1-229ENST00000530262 LRP1BQ9NZR2 4599 aa3.33□□□□□ -1.88
MACF1-229ENST00000530262 DNAH17Q9UFH2 4485 aa3.32□□□□□ -1.88
MACF1-229ENST00000530262 INE1O15225 51 aa3.31□□□□□ -1.88
MACF1-229ENST00000530262 FAT1Q14517 4588 aa3.3□□□□□ -1.88
MACF1-229ENST00000530262 LYSTQ99698 3801 aa3.3□□□□□ -1.88
MACF1-229ENST00000530262 DYNC2H1Q8NCM8 4307 aaKnown RBP3.29□□□□□ -1.88
MACF1-229ENST00000530262 KRTAP3-2Q9BYR7 98 aa3.28□□□□□ -1.88
MACF1-229ENST00000530262 FAT2Q9NYQ8 4349 aa3.28□□□□□ -1.88
MACF1-229ENST00000530262 DNAH2Q9P225 4427 aa3.28□□□□□ -1.88
MACF1-229ENST00000530262 KRTAP3-3Q9BYR6 98 aa3.28□□□□□ -1.89
MACF1-229ENST00000530262 RYR1P21817 5038 aa3.26□□□□□ -1.89
MACF1-229ENST00000530262 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
MACF1-229ENST00000530262 KRTAP23-1A1A580 65 aa3.24□□□□□ -1.89
MACF1-229ENST00000530262 DNAH7Q8WXX0 4024 aa3.23□□□□□ -1.89
MACF1-229ENST00000530262 KRTAP17-1Q9BYP8 105 aa3.22□□□□□ -1.89
MACF1-229ENST00000530262 SACSQ9NZJ4 4579 aa3.22□□□□□ -1.89
MACF1-229ENST00000530262 VPS13BQ7Z7G8 4022 aa3.21□□□□□ -1.89
MACF1-229ENST00000530262 DNAH8Q96JB1 4490 aa3.2□□□□□ -1.9
MACF1-229ENST00000530262 RYR3Q15413 4870 aa3.19□□□□□ -1.9
MACF1-229ENST00000530262 HYDINQ4G0P3 5121 aa3.19□□□□□ -1.9
MACF1-229ENST00000530262 DNAH6Q9C0G6 4158 aa3.18□□□□□ -1.9
MACF1-229ENST00000530262 KIAA1109Q2LD37 5005 aa3.17□□□□□ -1.9
MACF1-229ENST00000530262 KRTAP4-1Q9BYQ7 146 aa3.17□□□□□ -1.9
MACF1-229ENST00000530262 RYR2Q92736 4967 aa3.16□□□□□ -1.9
MACF1-229ENST00000530262 KRTAP12-3P60328 96 aa3.15□□□□□ -1.9
MACF1-229ENST00000530262 FRAS1Q86XX4 4008 aa3.15□□□□□ -1.91
MACF1-229ENST00000530262 APOBP04114 4563 aaKnown RBP3.13□□□□□ -1.91
MACF1-229ENST00000530262 HECTD4Q9Y4D8 3996 aa3.12□□□□□ -1.91
MACF1-229ENST00000530262 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
MACF1-229ENST00000530262 PKHD1P08F94 4074 aa3.09□□□□□ -1.91
MACF1-229ENST00000530262 CRCT1Q9UGL9 99 aa3.09□□□□□ -1.91
MACF1-229ENST00000530262 LRP1Q07954 4544 aaKnown RBP3.09□□□□□ -1.91
MACF1-229ENST00000530262 HSPG2P98160 4391 aa3.07□□□□□ -1.92
MACF1-229ENST00000530262 MT1HP80294 61 aa3.07□□□□□ -1.92
MACF1-229ENST00000530262 KMT2CQ8NEZ4 4911 aaKnown RBP3.07□□□□□ -1.92
MACF1-229ENST00000530262 LORP23490 312 aaPredicted RBP3.07□□□□□ -1.92
MACF1-229ENST00000530262 BIRC6Q9NR09 4857 aa3.05□□□□□ -1.92
MACF1-229ENST00000530262 FAT3Q8TDW7 4589 aa3.04□□□□□ -1.92
MACF1-229ENST00000530262 MYCBP2O75592 4640 aa3.04□□□□□ -1.92
MACF1-229ENST00000530262 HERC2O95714 4834 aa3.03□□□□□ -1.92
MACF1-229ENST00000530262 PKD1P98161 4303 aa3□□□□□ -1.93
MACF1-229ENST00000530262 EPPK1P58107 5090 aaKnown RBP2.97□□□□□ -1.93
MACF1-229ENST00000530262 MT2AP02795 61 aa2.96□□□□□ -1.93
MACF1-229ENST00000530262 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.93
MACF1-229ENST00000530262 MT1FP04733 61 aa2.93□□□□□ -1.94
MACF1-229ENST00000530262 LPAP08519 4548 aa2.93□□□□□ -1.94
MACF1-229ENST00000530262 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
MACF1-229ENST00000530262 LRP2P98164 4655 aa2.89□□□□□ -1.95
MACF1-229ENST00000530262 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
MACF1-229ENST00000530262 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
MACF1-229ENST00000530262 PCLOQ9Y6V0 5065 aa2.85□□□□□ -1.95
MACF1-229ENST00000530262 TNXBP22105 4242 aa2.84□□□□□ -1.95
MACF1-229ENST00000530262 PKHD1L1Q86WI1 4243 aa2.84□□□□□ -1.96
MACF1-229ENST00000530262 HERC1Q15751 4861 aa2.83□□□□□ -1.96
MACF1-229ENST00000530262 KRTAP19-4Q3LI73 84 aa2.82□□□□□ -1.96
MACF1-229ENST00000530262 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.96
MACF1-229ENST00000530262 KRTAP19-5Q3LI72 72 aa2.78□□□□□ -1.97
MACF1-229ENST00000530262 LCE2CQ5TA81 110 aa2.77□□□□□ -1.97
MACF1-229ENST00000530262 KRTAP10-7P60409 375 aaPredicted RBP2.75□□□□□ -1.97
MACF1-229ENST00000530262 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
MACF1-229ENST00000530262 KRTAP9-8Q9BYQ0 159 aa2.74□□□□□ -1.97
MACF1-229ENST00000530262 KRTAP19-1Q8IUB9 90 aa2.72□□□□□ -1.97
MACF1-229ENST00000530262 KRTAP19-8Q3LI54 63 aa2.67□□□□□ -1.98
MACF1-229ENST00000530262 KRTAP19-2Q3LHN2 52 aa2.67□□□□□ -1.98
MACF1-229ENST00000530262 KRTAP9-3Q9BYQ3 159 aa2.66□□□□□ -1.98
MACF1-229ENST00000530262 MT1BP07438 61 aa2.65□□□□□ -1.99
MACF1-229ENST00000530262 UBR4Q5T4S7 5183 aa2.63□□□□□ -1.99
MACF1-229ENST00000530262 MUC17Q685J3 4493 aa2.63□□□□□ -1.99
MACF1-229ENST00000530262 MT1XP80297 61 aa2.62□□□□□ -1.99
MACF1-229ENST00000530262 KRTAP9-2Q9BYQ4 174 aa2.62□□□□□ -1.99
MACF1-229ENST00000530262 FSIP2Q5CZC0 6907 aa2.61□□□□□ -1.99
MACF1-229ENST00000530262 SPRR2EP22531 72 aa2.61□□□□□ -1.99
MACF1-229ENST00000530262 SPRR2BP35325 72 aa2.61□□□□□ -1.99
MACF1-229ENST00000530262 SPRR2AP35326 72 aa2.61□□□□□ -1.99
MACF1-229ENST00000530262 RNF213Q63HN8 5207 aa2.61□□□□□ -1.99
MACF1-229ENST00000530262 LCE2BO14633 110 aa2.61□□□□□ -1.99
MACF1-229ENST00000530262 FAT4Q6V0I7 4981 aa2.59□□□□□ -1.99
MACF1-229ENST00000530262 KRTAP4-8A0A0G2JLE6 195 aa2.58□□□□□ -2
MACF1-229ENST00000530262 KRTAP4-8Q9BYQ9 185 aa2.58□□□□□ -2
MACF1-229ENST00000530262 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
MACF1-229ENST00000530262 HMCN2Q8NDA2 5059 aa2.57□□□□□ -2
MACF1-229ENST00000530262 MUC2Q02817 5179 aa2.55□□□□□ -2
MACF1-229ENST00000530262 LCE2AQ5TA79 106 aaPredicted RBP2.54□□□□□ -2
MACF1-229ENST00000530262 LCE2DQ5TA82 110 aaPredicted RBP2.54□□□□□ -2
MACF1-229ENST00000530262 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
MACF1-229ENST00000530262 LCE3BQ5TA77 95 aa2.52□□□□□ -2.01
MACF1-229ENST00000530262 SPRR2DP22532 72 aa2.52□□□□□ -2.01
MACF1-229ENST00000530262 MT1GP13640 62 aa2.5□□□□□ -2.01
MACF1-229ENST00000530262 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms