RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 IGKV2-30P06310 120 aa9.19□□□□□ -0.94
CAPRIN1-207ENST00000529307 MT1HL1P0DM35 61 aa9.16□□□□□ -0.94
CAPRIN1-207ENST00000529307 KRTAP4-5Q9BYR2 181 aa9.16□□□□□ -0.94
CAPRIN1-207ENST00000529307 DMBT1Q9UGM3 2413 aaPredicted RBP9.15□□□□□ -0.94
CAPRIN1-207ENST00000529307 C9orf92A6NGG3 77 aa9.12□□□□□ -0.95
CAPRIN1-207ENST00000529307 P0C880 135 aa9.11□□□□□ -0.95
CAPRIN1-207ENST00000529307 BIRC6Q9NR09 4857 aa9.09□□□□□ -0.95
CAPRIN1-207ENST00000529307 ABCA13Q86UQ4 5058 aa9.08□□□□□ -0.96
CAPRIN1-207ENST00000529307 H0YAA0 97 aa9.04□□□□□ -0.96
CAPRIN1-207ENST00000529307 HERC2O95714 4834 aa9.03□□□□□ -0.96
CAPRIN1-207ENST00000529307 IGKV2D-30A0A075B6S6 120 aa9.03□□□□□ -0.96
CAPRIN1-207ENST00000529307 C20orf166-AS1Q96NR2 134 aa9.01□□□□□ -0.97
CAPRIN1-207ENST00000529307 A0A1B0GU33 70 aa8.88□□□□□ -0.99
CAPRIN1-207ENST00000529307 CRIPTQ9P021 101 aa8.86□□□□□ -0.99
CAPRIN1-207ENST00000529307 K7ERS5 55 aa8.84□□□□□ -0.99
CAPRIN1-207ENST00000529307 XP32Q5T750 250 aa8.84□□□□□ -0.99
CAPRIN1-207ENST00000529307 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
CAPRIN1-207ENST00000529307 LPAP08519 4548 aa8.8□□□□□ -1
CAPRIN1-207ENST00000529307 RPL37P61927 97 aaKnown RBP8.79□□□□□ -1
CAPRIN1-207ENST00000529307 SPINT4Q6UDR6 99 aa8.79□□□□□ -1
CAPRIN1-207ENST00000529307 LRP2P98164 4655 aa8.77□□□□□ -1.01
CAPRIN1-207ENST00000529307 A0A0A0MQY5 61 aa8.74□□□□□ -1.01
CAPRIN1-207ENST00000529307 NDUFAF8A1L188 74 aa8.74□□□□□ -1.01
CAPRIN1-207ENST00000529307 J3QL48 77 aa8.73□□□□□ -1.01
CAPRIN1-207ENST00000529307 TPRXLQ17RH7 258 aa8.73□□□□□ -1.01
CAPRIN1-207ENST00000529307 PCLOQ9Y6V0 5065 aa8.7□□□□□ -1.02
CAPRIN1-207ENST00000529307 KRTAP15-1Q3LI76 137 aa8.69□□□□□ -1.02
CAPRIN1-207ENST00000529307 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
CAPRIN1-207ENST00000529307 COX6B2Q6YFQ2 88 aa8.58□□□□□ -1.04
CAPRIN1-207ENST00000529307 HERC1Q15751 4861 aa8.58□□□□□ -1.04
CAPRIN1-207ENST00000529307 HMCN2Q8NDA2 5059 aa8.46□□□□□ -1.05
CAPRIN1-207ENST00000529307 C10orf95Q9H7T3 257 aa8.43□□□□□ -1.06
CAPRIN1-207ENST00000529307 MUC17Q685J3 4493 aa8.42□□□□□ -1.06
CAPRIN1-207ENST00000529307 SEC61BP60468 96 aaKnown RBP8.39□□□□□ -1.07
CAPRIN1-207ENST00000529307 KRTAP4-1Q9BYQ7 146 aa8.37□□□□□ -1.07
CAPRIN1-207ENST00000529307 KRTAP3-3Q9BYR6 98 aa8.31□□□□□ -1.08
CAPRIN1-207ENST00000529307 A0A0D9SG42 100 aa8.29□□□□□ -1.08
CAPRIN1-207ENST00000529307 LUZP6Q538Z0 58 aa8.29□□□□□ -1.08
CAPRIN1-207ENST00000529307 KRTAP13-4Q3LI77 160 aa8.29□□□□□ -1.08
CAPRIN1-207ENST00000529307 KRTAP10-6P60371 365 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-207ENST00000529307 MUC2Q02817 5179 aa8.28□□□□□ -1.08
CAPRIN1-207ENST00000529307 S4R3F8 94 aa8.24□□□□□ -1.09
CAPRIN1-207ENST00000529307 KRTAP19-2Q3LHN2 52 aa8.16□□□□□ -1.1
CAPRIN1-207ENST00000529307 KRTAP3-2Q9BYR7 98 aa8.15□□□□□ -1.1
CAPRIN1-207ENST00000529307 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
CAPRIN1-207ENST00000529307 KRTAP12-2P59991 146 aa8.1□□□□□ -1.11
CAPRIN1-207ENST00000529307 RNF213Q63HN8 5207 aa8.05□□□□□ -1.12
CAPRIN1-207ENST00000529307 FLGP20930 4061 aaPredicted RBP8.03□□□□□ -1.12
CAPRIN1-207ENST00000529307 KRTAP12-1P59990 96 aa8.01□□□□□ -1.13
CAPRIN1-207ENST00000529307 PLAC4Q8WY50 150 aa7.93□□□□□ -1.14
CAPRIN1-207ENST00000529307 FAT4Q6V0I7 4981 aa7.92□□□□□ -1.14
CAPRIN1-207ENST00000529307 LCE2CQ5TA81 110 aa7.9□□□□□ -1.15
CAPRIN1-207ENST00000529307 M0QZ58 72 aa7.78□□□□□ -1.16
CAPRIN1-207ENST00000529307 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
CAPRIN1-207ENST00000529307 MT1HP80294 61 aa7.69□□□□□ -1.18
CAPRIN1-207ENST00000529307 R4GN34 69 aa7.61□□□□□ -1.19
CAPRIN1-207ENST00000529307 M0R2T5 61 aa7.58□□□□□ -1.2
CAPRIN1-207ENST00000529307 PP632Q6XCG6 107 aa7.52□□□□□ -1.21
CAPRIN1-207ENST00000529307 CAMK2N1Q7Z7J9 78 aa7.45□□□□□ -1.22
CAPRIN1-207ENST00000529307 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
CAPRIN1-207ENST00000529307 MT2AP02795 61 aa7.43□□□□□ -1.22
CAPRIN1-207ENST00000529307 MT1FP04733 61 aa7.41□□□□□ -1.22
CAPRIN1-207ENST00000529307 KRTAP10-10P60014 251 aa7.34□□□□□ -1.23
CAPRIN1-207ENST00000529307 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.23
CAPRIN1-207ENST00000529307 SPRR2GQ9BYE4 73 aa7.32□□□□□ -1.24
CAPRIN1-207ENST00000529307 PRO2289Q9P1D8 64 aa7.31□□□□□ -1.24
CAPRIN1-207ENST00000529307 SPRR5A0A1B0GTR4 108 aa7.29□□□□□ -1.24
CAPRIN1-207ENST00000529307 LCE2AQ5TA79 106 aaPredicted RBP7.28□□□□□ -1.24
CAPRIN1-207ENST00000529307 KRTAP9-3Q9BYQ3 159 aa7.17□□□□□ -1.26
CAPRIN1-207ENST00000529307 KRTAP19-8Q3LI54 63 aa7.1□□□□□ -1.27
CAPRIN1-207ENST00000529307 KRTAP23-1A1A580 65 aa7.09□□□□□ -1.27
CAPRIN1-207ENST00000529307 INE1O15225 51 aa7.07□□□□□ -1.28
CAPRIN1-207ENST00000529307 MT1BP07438 61 aa7.04□□□□□ -1.28
CAPRIN1-207ENST00000529307 LCE2BO14633 110 aa6.97□□□□□ -1.29
CAPRIN1-207ENST00000529307 TNP1P09430 55 aa6.96□□□□□ -1.3
CAPRIN1-207ENST00000529307 LCE2DQ5TA82 110 aaPredicted RBP6.9□□□□□ -1.31
CAPRIN1-207ENST00000529307 USH2AO75445 5202 aa6.88□□□□□ -1.31
CAPRIN1-207ENST00000529307 MT1XP80297 61 aa6.85□□□□□ -1.31
CAPRIN1-207ENST00000529307 KRTAP10-5P60370 271 aa6.85□□□□□ -1.31
CAPRIN1-207ENST00000529307 SSPOA2VEC9 5147 aa6.63□□□□□ -1.35
CAPRIN1-207ENST00000529307 KRTAP10-7P60409 375 aaPredicted RBP6.61□□□□□ -1.35
CAPRIN1-207ENST00000529307 LCE3AQ5TA76 89 aa6.57□□□□□ -1.36
CAPRIN1-207ENST00000529307 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
CAPRIN1-207ENST00000529307 KRTAP10-12P60413 245 aa6.5□□□□□ -1.37
CAPRIN1-207ENST00000529307 KMT2DO14686 5537 aa6.45□□□□□ -1.38
CAPRIN1-207ENST00000529307 KRTAP19-6Q3LI70 58 aa6.43□□□□□ -1.38
CAPRIN1-207ENST00000529307 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
CAPRIN1-207ENST00000529307 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
CAPRIN1-207ENST00000529307 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
CAPRIN1-207ENST00000529307 FCGBPQ9Y6R7 5405 aaPredicted RBP6.29□□□□□ -1.4
CAPRIN1-207ENST00000529307 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
CAPRIN1-207ENST00000529307 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
CAPRIN1-207ENST00000529307 KRTAP9-2Q9BYQ4 174 aa6.2□□□□□ -1.42
CAPRIN1-207ENST00000529307 KRTAP19-7Q3SYF9 63 aa6.12□□□□□ -1.43
CAPRIN1-207ENST00000529307 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
CAPRIN1-207ENST00000529307 MT1EP04732 61 aa5.98□□□□□ -1.45
CAPRIN1-207ENST00000529307 MACF1Q9UPN3 7388 aaKnown RBP5.97□□□□□ -1.45
CAPRIN1-207ENST00000529307 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
CAPRIN1-207ENST00000529307 MT1LQ93083 61 aa5.88□□□□□ -1.47
CAPRIN1-207ENST00000529307 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms