RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 TMEM258P61165 79 aa11.99□□□□□ -0.49
LDLRAD3-203ENST00000528989 M0R2T5 61 aa11.98□□□□□ -0.49
LDLRAD3-203ENST00000528989 LCE2AQ5TA79 106 aaPredicted RBP11.98□□□□□ -0.49
LDLRAD3-203ENST00000528989 COA5Q86WW8 74 aa11.9□□□□□ -0.5
LDLRAD3-203ENST00000528989 ATP5EP56381 51 aaPredicted RBP11.88□□□□□ -0.51
LDLRAD3-203ENST00000528989 CHKB-CPT1BH3BT56 60 aa11.85□□□□□ -0.51
LDLRAD3-203ENST00000528989 CSAG1Q6PB30 78 aa11.83□□□□□ -0.52
LDLRAD3-203ENST00000528989 KRTAP10-6P60371 365 aaPredicted RBP11.75□□□□□ -0.53
LDLRAD3-203ENST00000528989 LORP23490 312 aaPredicted RBP11.71□□□□□ -0.53
LDLRAD3-203ENST00000528989 KRTAP9-8Q9BYQ0 159 aa11.66□□□□□ -0.54
LDLRAD3-203ENST00000528989 SPTSSBQ8NFR3 76 aa11.64□□□□□ -0.55
LDLRAD3-203ENST00000528989 SERP1Q9Y6X1 66 aa11.62□□□□□ -0.55
LDLRAD3-203ENST00000528989 MT2AP02795 61 aa11.55□□□□□ -0.56
LDLRAD3-203ENST00000528989 MT1FP04733 61 aa11.51□□□□□ -0.57
LDLRAD3-203ENST00000528989 ADM2Q7Z4H4 148 aa11.51□□□□□ -0.57
LDLRAD3-203ENST00000528989 H0YAA0 97 aa11.47□□□□□ -0.57
LDLRAD3-203ENST00000528989 KRTAP10-10P60014 251 aa11.44□□□□□ -0.58
LDLRAD3-203ENST00000528989 KRTAP3-2Q9BYR7 98 aa11.44□□□□□ -0.58
LDLRAD3-203ENST00000528989 P0C880 135 aa11.41□□□□□ -0.58
LDLRAD3-203ENST00000528989 RPS28P62857 69 aaKnown RBP11.38□□□□□ -0.59
LDLRAD3-203ENST00000528989 SEC61GP60059 68 aa11.26□□□□□ -0.61
LDLRAD3-203ENST00000528989 LINC01558Q9Y6Z2 57 aa11.26□□□□□ -0.61
LDLRAD3-203ENST00000528989 SMIM26A0A096LP01 95 aa11.25□□□□□ -0.61
LDLRAD3-203ENST00000528989 A0A1B0GU69 56 aa11.25□□□□□ -0.61
LDLRAD3-203ENST00000528989 KRTAP9-3Q9BYQ3 159 aa11.24□□□□□ -0.61
LDLRAD3-203ENST00000528989 Q1T7F1 81 aa11.16□□□□□ -0.62
LDLRAD3-203ENST00000528989 KRTAP19-1Q8IUB9 90 aa11.13□□□□□ -0.63
LDLRAD3-203ENST00000528989 PRR15LQ9BU68 103 aa11.1□□□□□ -0.63
LDLRAD3-203ENST00000528989 CRIPTQ9P021 101 aa11.1□□□□□ -0.63
LDLRAD3-203ENST00000528989 R4GN34 69 aa11.1□□□□□ -0.63
LDLRAD3-203ENST00000528989 V9GYY9 64 aa11.08□□□□□ -0.64
LDLRAD3-203ENST00000528989 PSPHP1O15172 72 aa11.08□□□□□ -0.64
LDLRAD3-203ENST00000528989 M0QZ58 72 aa11.07□□□□□ -0.64
LDLRAD3-203ENST00000528989 SPRR2GQ9BYE4 73 aa11.06□□□□□ -0.64
LDLRAD3-203ENST00000528989 A0A1B0GU33 70 aa11.06□□□□□ -0.64
LDLRAD3-203ENST00000528989 KRTAP13-4Q3LI77 160 aa11.05□□□□□ -0.64
LDLRAD3-203ENST00000528989 LCE2BO14633 110 aa11.03□□□□□ -0.64
LDLRAD3-203ENST00000528989 LCE2DQ5TA82 110 aaPredicted RBP10.99□□□□□ -0.65
LDLRAD3-203ENST00000528989 SPATA8Q6RVD6 105 aa10.98□□□□□ -0.65
LDLRAD3-203ENST00000528989 LINC01554Q52M75 96 aa10.93□□□□□ -0.66
LDLRAD3-203ENST00000528989 Q5VV11 94 aa10.93□□□□□ -0.66
LDLRAD3-203ENST00000528989 USH2AO75445 5202 aa10.88□□□□□ -0.67
LDLRAD3-203ENST00000528989 KRTAP9-2Q9BYQ4 174 aa10.87□□□□□ -0.67
LDLRAD3-203ENST00000528989 FSIP2Q5CZC0 6907 aa10.87□□□□□ -0.67
LDLRAD3-203ENST00000528989 KRTAP19-8Q3LI54 63 aa10.83□□□□□ -0.68
LDLRAD3-203ENST00000528989 UQCR11O14957 56 aa10.8□□□□□ -0.68
LDLRAD3-203ENST00000528989 A0A0D9SG42 100 aa10.79□□□□□ -0.68
LDLRAD3-203ENST00000528989 MT1BP07438 61 aa10.78□□□□□ -0.68
LDLRAD3-203ENST00000528989 A8MU10 97 aa10.76□□□□□ -0.69
LDLRAD3-203ENST00000528989 A6NED7 52 aa10.68□□□□□ -0.7
LDLRAD3-203ENST00000528989 MIR22HGQ0VDD5 57 aa10.66□□□□□ -0.7
LDLRAD3-203ENST00000528989 SSPOA2VEC9 5147 aa10.62□□□□□ -0.71
LDLRAD3-203ENST00000528989 PLAC4Q8WY50 150 aa10.59□□□□□ -0.71
LDLRAD3-203ENST00000528989 A6NN06 94 aa10.58□□□□□ -0.72
LDLRAD3-203ENST00000528989 KRTAP12-1P59990 96 aa10.55□□□□□ -0.72
LDLRAD3-203ENST00000528989 SPINT4Q6UDR6 99 aa10.55□□□□□ -0.72
LDLRAD3-203ENST00000528989 KRTAP12-2P59991 146 aa10.54□□□□□ -0.72
LDLRAD3-203ENST00000528989 CRCT1Q9UGL9 99 aa10.4□□□□□ -0.74
LDLRAD3-203ENST00000528989 CDC42SE1Q9NRR8 79 aa10.39□□□□□ -0.75
LDLRAD3-203ENST00000528989 KRTAP19-6Q3LI70 58 aa10.38□□□□□ -0.75
LDLRAD3-203ENST00000528989 MT1XP80297 61 aa10.34□□□□□ -0.75
LDLRAD3-203ENST00000528989 CAMK2N1Q7Z7J9 78 aa10.34□□□□□ -0.75
LDLRAD3-203ENST00000528989 KRTAP10-5P60370 271 aa10.31□□□□□ -0.76
LDLRAD3-203ENST00000528989 BRK1Q8WUW1 75 aa10.25□□□□□ -0.77
LDLRAD3-203ENST00000528989 FCGBPQ9Y6R7 5405 aaPredicted RBP10.23□□□□□ -0.77
LDLRAD3-203ENST00000528989 K7ERS5 55 aa10.19□□□□□ -0.78
LDLRAD3-203ENST00000528989 PRO2289Q9P1D8 64 aa10.18□□□□□ -0.78
LDLRAD3-203ENST00000528989 KRTAP9-6A0A140TA67 174 aa10.16□□□□□ -0.78
LDLRAD3-203ENST00000528989 C10orf95Q9H7T3 257 aa10.04□□□□□ -0.8
LDLRAD3-203ENST00000528989 KRTAP10-7P60409 375 aaPredicted RBP9.93□□□□□ -0.82
LDLRAD3-203ENST00000528989 KMT2DO14686 5537 aa9.84□□□□□ -0.83
LDLRAD3-203ENST00000528989 MACF1Q9UPN3 7388 aaKnown RBP9.81□□□□□ -0.84
LDLRAD3-203ENST00000528989 PRO0628Q9UI54 55 aa9.78□□□□□ -0.84
LDLRAD3-203ENST00000528989 KRTAP10-12P60413 245 aa9.76□□□□□ -0.85
LDLRAD3-203ENST00000528989 ROMO1P60602 79 aa9.75□□□□□ -0.85
LDLRAD3-203ENST00000528989 TNP1P09430 55 aa9.73□□□□□ -0.85
LDLRAD3-203ENST00000528989 KRTAP4-8A0A0G2JLE6 195 aa9.7□□□□□ -0.86
LDLRAD3-203ENST00000528989 KRTAP4-8Q9BYQ9 185 aa9.7□□□□□ -0.86
LDLRAD3-203ENST00000528989 PMAIP1Q13794 54 aa9.67□□□□□ -0.86
LDLRAD3-203ENST00000528989 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.64□□□□□ -0.87
LDLRAD3-203ENST00000528989 SYNE2Q8WXH0 6885 aaKnown RBP9.59□□□□□ -0.87
LDLRAD3-203ENST00000528989 KRTAP25-1Q3LHN0 102 aa9.59□□□□□ -0.87
LDLRAD3-203ENST00000528989 LCE3AQ5TA76 89 aa9.48□□□□□ -0.89
LDLRAD3-203ENST00000528989 KRTAP8-1Q8IUC2 63 aa9.45□□□□□ -0.9
LDLRAD3-203ENST00000528989 KRTAP9-7A8MTY7 169 aa9.25□□□□□ -0.93
LDLRAD3-203ENST00000528989 KRTAP6-3Q3LI67 103 aa9.24□□□□□ -0.93
LDLRAD3-203ENST00000528989 KRTAP19-5Q3LI72 72 aa9.24□□□□□ -0.93
LDLRAD3-203ENST00000528989 KRTAP23-1A1A580 65 aa9.23□□□□□ -0.93
LDLRAD3-203ENST00000528989 KRTAP19-7Q3SYF9 63 aa9.23□□□□□ -0.93
LDLRAD3-203ENST00000528989 SPRR2FQ96RM1 72 aa9.23□□□□□ -0.93
LDLRAD3-203ENST00000528989 KRTAP5-9P26371 169 aa9.22□□□□□ -0.93
LDLRAD3-203ENST00000528989 MUC12Q9UKN1 5478 aa9.19□□□□□ -0.94
LDLRAD3-203ENST00000528989 PRAC1Q96KF2 57 aa9.17□□□□□ -0.94
LDLRAD3-203ENST00000528989 PP632Q6XCG6 107 aa9.13□□□□□ -0.95
LDLRAD3-203ENST00000528989 KRTAP12-3P60328 96 aa9.08□□□□□ -0.96
LDLRAD3-203ENST00000528989 MT1EP04732 61 aa9.07□□□□□ -0.96
LDLRAD3-203ENST00000528989 KTN1-AS1Q86SY8 53 aa9.07□□□□□ -0.96
LDLRAD3-203ENST00000528989 MDN1Q9NU22 5596 aa9.05□□□□□ -0.96
LDLRAD3-203ENST00000528989 LCE1AQ5T7P2 110 aa8.87□□□□□ -0.99
LDLRAD3-203ENST00000528989 SPRR2EP22531 72 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms