RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	CSAG1	Q6PB30	78 aa		12.14	□□□□□ -0.47
GSDMD-208	ENST00000528475	TNXB	P22105	4242 aa		12.11	□□□□□ -0.47
GSDMD-208	ENST00000528475	HSPG2	P98160	4391 aa		12.11	□□□□□ -0.47
GSDMD-208	ENST00000528475	KRTAP17-1	Q9BYP8	105 aa		12.04	□□□□□ -0.48
GSDMD-208	ENST00000528475	RYR1	P21817	5038 aa		12.04	□□□□□ -0.48
GSDMD-208	ENST00000528475	XP32	Q5T750	250 aa		12.04	□□□□□ -0.48
GSDMD-208	ENST00000528475	KRTAP3-3	Q9BYR6	98 aa		12.04	□□□□□ -0.48
GSDMD-208	ENST00000528475	LRP1	Q07954	4544 aa	Known RBP	11.97	□□□□□ -0.49
GSDMD-208	ENST00000528475		K7ERS5	55 aa		11.96	□□□□□ -0.49
GSDMD-208	ENST00000528475	KRTAP10-6	P60371	365 aa	Predicted RBP	11.96	□□□□□ -0.5
GSDMD-208	ENST00000528475		S4R3F8	94 aa		11.91	□□□□□ -0.5
GSDMD-208	ENST00000528475	KRTAP25-1	Q3LHN0	102 aa		11.88	□□□□□ -0.51
GSDMD-208	ENST00000528475	KIAA1109	Q2LD37	5005 aa		11.88	□□□□□ -0.51
GSDMD-208	ENST00000528475	KRTAP3-2	Q9BYR7	98 aa		11.88	□□□□□ -0.51
GSDMD-208	ENST00000528475	EPPK1	P58107	5090 aa	Known RBP	11.84	□□□□□ -0.51
GSDMD-208	ENST00000528475	MT1HL1	P0DM35	61 aa		11.8	□□□□□ -0.52
GSDMD-208	ENST00000528475	KRTAP13-4	Q3LI77	160 aa		11.79	□□□□□ -0.52
GSDMD-208	ENST00000528475	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.74	□□□□□ -0.53
GSDMD-208	ENST00000528475	ROMO1	P60602	79 aa		11.71	□□□□□ -0.54
GSDMD-208	ENST00000528475		P0C880	135 aa		11.66	□□□□□ -0.54
GSDMD-208	ENST00000528475		A0A0D9SG42	100 aa		11.63	□□□□□ -0.55
GSDMD-208	ENST00000528475	TPRXL	Q17RH7	258 aa		11.62	□□□□□ -0.55
GSDMD-208	ENST00000528475	KRTAP4-5	Q9BYR2	181 aa		11.62	□□□□□ -0.55
GSDMD-208	ENST00000528475	MYCBP2	O75592	4640 aa		11.61	□□□□□ -0.55
GSDMD-208	ENST00000528475	CRIPT	Q9P021	101 aa		11.53	□□□□□ -0.56
GSDMD-208	ENST00000528475	KRTAP12-2	P59991	146 aa		11.42	□□□□□ -0.58
GSDMD-208	ENST00000528475		M0QZ58	72 aa		11.39	□□□□□ -0.59
GSDMD-208	ENST00000528475	KRTAP12-1	P59990	96 aa		11.37	□□□□□ -0.59
GSDMD-208	ENST00000528475	LPA	P08519	4548 aa		11.32	□□□□□ -0.6
GSDMD-208	ENST00000528475	LRP2	P98164	4655 aa		11.31	□□□□□ -0.6
GSDMD-208	ENST00000528475	BIRC6	Q9NR09	4857 aa		11.27	□□□□□ -0.61
GSDMD-208	ENST00000528475		J3QL48	77 aa		11.26	□□□□□ -0.61
GSDMD-208	ENST00000528475	SPINT4	Q6UDR6	99 aa		11.26	□□□□□ -0.61
GSDMD-208	ENST00000528475	ABCA13	Q86UQ4	5058 aa		11.25	□□□□□ -0.61
GSDMD-208	ENST00000528475	HERC2	O95714	4834 aa		11.22	□□□□□ -0.61
GSDMD-208	ENST00000528475	C10orf95	Q9H7T3	257 aa		11.18	□□□□□ -0.62
GSDMD-208	ENST00000528475	SEC61B	P60468	96 aa	Known RBP	11.15	□□□□□ -0.62
GSDMD-208	ENST00000528475		R4GN34	69 aa		11.02	□□□□□ -0.65
GSDMD-208	ENST00000528475	MUC17	Q685J3	4493 aa		10.97	□□□□□ -0.65
GSDMD-208	ENST00000528475	KRTAP4-1	Q9BYQ7	146 aa		10.95	□□□□□ -0.66
GSDMD-208	ENST00000528475	LOR	P23490	312 aa	Predicted RBP	10.85	□□□□□ -0.67
GSDMD-208	ENST00000528475	KRTAP19-2	Q3LHN2	52 aa		10.85	□□□□□ -0.67
GSDMD-208	ENST00000528475	KRTAP15-1	Q3LI76	137 aa		10.85	□□□□□ -0.67
GSDMD-208	ENST00000528475	PCLO	Q9Y6V0	5065 aa		10.72	□□□□□ -0.69
GSDMD-208	ENST00000528475	HERC1	Q15751	4861 aa		10.56	□□□□□ -0.72
GSDMD-208	ENST00000528475		A0A0A0MQY5	61 aa		10.56	□□□□□ -0.72
GSDMD-208	ENST00000528475	HMCN2	Q8NDA2	5059 aa		10.51	□□□□□ -0.73
GSDMD-208	ENST00000528475	NDUFAF8	A1L188	74 aa		10.48	□□□□□ -0.73
GSDMD-208	ENST00000528475	CAMK2N1	Q7Z7J9	78 aa		10.45	□□□□□ -0.74
GSDMD-208	ENST00000528475	FLG	P20930	4061 aa	Predicted RBP	10.42	□□□□□ -0.74
GSDMD-208	ENST00000528475	PP632	Q6XCG6	107 aa		10.42	□□□□□ -0.74
GSDMD-208	ENST00000528475	PLAC4	Q8WY50	150 aa		10.35	□□□□□ -0.75
GSDMD-208	ENST00000528475	MUC2	Q02817	5179 aa		10.26	□□□□□ -0.77
GSDMD-208	ENST00000528475	LCE2C	Q5TA81	110 aa		10.14	□□□□□ -0.79
GSDMD-208	ENST00000528475	KRTAP23-1	A1A580	65 aa		10.14	□□□□□ -0.79
GSDMD-208	ENST00000528475	TNP1	P09430	55 aa		10.13	□□□□□ -0.79
GSDMD-208	ENST00000528475	SPRR2G	Q9BYE4	73 aa		10.05	□□□□□ -0.8
GSDMD-208	ENST00000528475	RNF213	Q63HN8	5207 aa		9.99	□□□□□ -0.81
GSDMD-208	ENST00000528475	UBR4	Q5T4S7	5183 aa		9.98	□□□□□ -0.81
GSDMD-208	ENST00000528475	KRTAP19-1	Q8IUB9	90 aa		9.94	□□□□□ -0.82
GSDMD-208	ENST00000528475	LUZP6	Q538Z0	58 aa		9.93	□□□□□ -0.82
GSDMD-208	ENST00000528475	MT1H	P80294	61 aa		9.88	□□□□□ -0.83
GSDMD-208	ENST00000528475		M0R2T5	61 aa		9.83	□□□□□ -0.84
GSDMD-208	ENST00000528475	FAT4	Q6V0I7	4981 aa		9.81	□□□□□ -0.84
GSDMD-208	ENST00000528475	SPRR5	A0A1B0GTR4	108 aa		9.74	□□□□□ -0.85
GSDMD-208	ENST00000528475	MT2A	P02795	61 aa		9.71	□□□□□ -0.85
GSDMD-208	ENST00000528475	MT1F	P04733	61 aa		9.7	□□□□□ -0.86
GSDMD-208	ENST00000528475	KRTAP10-10	P60014	251 aa		9.66	□□□□□ -0.86
GSDMD-208	ENST00000528475	KRTAP9-8	Q9BYQ0	159 aa		9.65	□□□□□ -0.86
GSDMD-208	ENST00000528475	KRTAP19-8	Q3LI54	63 aa		9.62	□□□□□ -0.87
GSDMD-208	ENST00000528475	LCE3A	Q5TA76	89 aa		9.55	□□□□□ -0.88
GSDMD-208	ENST00000528475	MT1B	P07438	61 aa		9.43	□□□□□ -0.9
GSDMD-208	ENST00000528475	KRTAP8-1	Q8IUC2	63 aa		9.4	□□□□□ -0.9
GSDMD-208	ENST00000528475	KRTAP10-5	P60370	271 aa		9.38	□□□□□ -0.91
GSDMD-208	ENST00000528475	MT1X	P80297	61 aa		9.36	□□□□□ -0.91
GSDMD-208	ENST00000528475	KRTAP9-3	Q9BYQ3	159 aa		9.25	□□□□□ -0.93
GSDMD-208	ENST00000528475	LCE2A	Q5TA79	106 aa	Predicted RBP	9.24	□□□□□ -0.93
GSDMD-208	ENST00000528475	KRTAP10-12	P60413	245 aa		9.19	□□□□□ -0.94
GSDMD-208	ENST00000528475	KRTAP12-3	P60328	96 aa		9.12	□□□□□ -0.95
GSDMD-208	ENST00000528475	KRTAP10-7	P60409	375 aa	Predicted RBP	9.06	□□□□□ -0.96
GSDMD-208	ENST00000528475	PRO2289	Q9P1D8	64 aa		9.04	□□□□□ -0.96
GSDMD-208	ENST00000528475	LCE2B	O14633	110 aa		8.91	□□□□□ -0.98
GSDMD-208	ENST00000528475	KRTAP19-5	Q3LI72	72 aa		8.7	□□□□□ -1.02
GSDMD-208	ENST00000528475	LCE3C	Q5T5A8	94 aa		8.6	□□□□□ -1.03
GSDMD-208	ENST00000528475	INE1	O15225	51 aa		8.58	□□□□□ -1.04
GSDMD-208	ENST00000528475	USH2A	O75445	5202 aa		8.53	□□□□□ -1.04
GSDMD-208	ENST00000528475	KRTAP4-8	A0A0G2JLE6	195 aa		8.45	□□□□□ -1.06
GSDMD-208	ENST00000528475	KRTAP4-8	Q9BYQ9	185 aa		8.45	□□□□□ -1.06
GSDMD-208	ENST00000528475	KRTAP19-7	Q3SYF9	63 aa		8.35	□□□□□ -1.07
GSDMD-208	ENST00000528475	KRTAP19-4	Q3LI73	84 aa		8.31	□□□□□ -1.08
GSDMD-208	ENST00000528475	LCE2D	Q5TA82	110 aa	Predicted RBP	8.26	□□□□□ -1.09
GSDMD-208	ENST00000528475	KRTAP19-6	Q3LI70	58 aa		8.25	□□□□□ -1.09
GSDMD-208	ENST00000528475	KRTAP9-6	A8MVA2	160 aa		8.25	□□□□□ -1.09
GSDMD-208	ENST00000528475	SSPO	A2VEC9	5147 aa		8.23	□□□□□ -1.09
GSDMD-208	ENST00000528475	KMT2D	O14686	5537 aa		8.23	□□□□□ -1.09
GSDMD-208	ENST00000528475	MT1E	P04732	61 aa		8.11	□□□□□ -1.11
GSDMD-208	ENST00000528475	MT1L	Q93083	61 aa		8.11	□□□□□ -1.11
GSDMD-208	ENST00000528475	KRTAP4-7	Q9BYR0	210 aa		8.07	□□□□□ -1.12
GSDMD-208	ENST00000528475	KRTAP2-3	P0C7H8	128 aa		8.06	□□□□□ -1.12
GSDMD-208	ENST00000528475	KRTAP2-4	Q9BYR9	128 aa		8.06	□□□□□ -1.12

Retrieved 100 of 20,778 RNA–protein pairs in 231 ms