RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 LCA10Q71F78 164 aa10.65□□□□□ -0.71
PACSIN3-205ENST00000528462 ACYP2P14621 99 aa10.63□□□□□ -0.71
PACSIN3-205ENST00000528462 KRTAP10-6P60371 365 aaPredicted RBP10.59□□□□□ -0.71
PACSIN3-205ENST00000528462 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
PACSIN3-205ENST00000528462 LORP23490 312 aaPredicted RBP10.56□□□□□ -0.72
PACSIN3-205ENST00000528462 CSAG1Q6PB30 78 aa10.55□□□□□ -0.72
PACSIN3-205ENST00000528462 ATP5EP56381 51 aaPredicted RBP10.45□□□□□ -0.74
PACSIN3-205ENST00000528462 KRTAP9-8Q9BYQ0 159 aa10.45□□□□□ -0.74
PACSIN3-205ENST00000528462 TMEM258P61165 79 aa10.43□□□□□ -0.74
PACSIN3-205ENST00000528462 CHKB-CPT1BH3BT56 60 aa10.4□□□□□ -0.74
PACSIN3-205ENST00000528462 COA5Q86WW8 74 aa10.39□□□□□ -0.75
PACSIN3-205ENST00000528462 SPTSSBQ8NFR3 76 aa10.36□□□□□ -0.75
PACSIN3-205ENST00000528462 MT2AP02795 61 aa10.35□□□□□ -0.75
PACSIN3-205ENST00000528462 H0YAA0 97 aa10.31□□□□□ -0.76
PACSIN3-205ENST00000528462 MT1FP04733 61 aa10.26□□□□□ -0.77
PACSIN3-205ENST00000528462 KRTAP10-10P60014 251 aa10.23□□□□□ -0.77
PACSIN3-205ENST00000528462 ADM2Q7Z4H4 148 aa10.14□□□□□ -0.79
PACSIN3-205ENST00000528462 KRTAP9-3Q9BYQ3 159 aa10.1□□□□□ -0.79
PACSIN3-205ENST00000528462 SERP1Q9Y6X1 66 aa10.1□□□□□ -0.79
PACSIN3-205ENST00000528462 LCE2DQ5TA82 110 aaPredicted RBP10.09□□□□□ -0.79
PACSIN3-205ENST00000528462 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
PACSIN3-205ENST00000528462 CRIPTQ9P021 101 aa10.05□□□□□ -0.8
PACSIN3-205ENST00000528462 RPS28P62857 69 aaKnown RBP10.03□□□□□ -0.8
PACSIN3-205ENST00000528462 P0C880 135 aa10.02□□□□□ -0.81
PACSIN3-205ENST00000528462 SPRR2GQ9BYE4 73 aa9.95□□□□□ -0.82
PACSIN3-205ENST00000528462 SEC61GP60059 68 aa9.93□□□□□ -0.82
PACSIN3-205ENST00000528462 KRTAP19-1Q8IUB9 90 aa9.93□□□□□ -0.82
PACSIN3-205ENST00000528462 KRTAP9-2Q9BYQ4 174 aa9.92□□□□□ -0.82
PACSIN3-205ENST00000528462 LCE2BO14633 110 aa9.88□□□□□ -0.83
PACSIN3-205ENST00000528462 LINC01558Q9Y6Z2 57 aa9.84□□□□□ -0.83
PACSIN3-205ENST00000528462 R4GN34 69 aa9.84□□□□□ -0.83
PACSIN3-205ENST00000528462 A0A1B0GU69 56 aa9.84□□□□□ -0.83
PACSIN3-205ENST00000528462 M0QZ58 72 aa9.79□□□□□ -0.84
PACSIN3-205ENST00000528462 SMIM26A0A096LP01 95 aa9.76□□□□□ -0.85
PACSIN3-205ENST00000528462 KRTAP19-8Q3LI54 63 aa9.75□□□□□ -0.85
PACSIN3-205ENST00000528462 PRR15LQ9BU68 103 aa9.75□□□□□ -0.85
PACSIN3-205ENST00000528462 USH2AO75445 5202 aa9.75□□□□□ -0.85
PACSIN3-205ENST00000528462 V9GYY9 64 aa9.73□□□□□ -0.85
PACSIN3-205ENST00000528462 Q1T7F1 81 aa9.71□□□□□ -0.85
PACSIN3-205ENST00000528462 A0A1B0GU33 70 aa9.71□□□□□ -0.86
PACSIN3-205ENST00000528462 Q5VV11 94 aa9.68□□□□□ -0.86
PACSIN3-205ENST00000528462 FSIP2Q5CZC0 6907 aa9.65□□□□□ -0.86
PACSIN3-205ENST00000528462 KRTAP13-4Q3LI77 160 aa9.65□□□□□ -0.86
PACSIN3-205ENST00000528462 MT1BP07438 61 aa9.63□□□□□ -0.87
PACSIN3-205ENST00000528462 LINC01554Q52M75 96 aa9.57□□□□□ -0.88
PACSIN3-205ENST00000528462 SPATA8Q6RVD6 105 aa9.53□□□□□ -0.88
PACSIN3-205ENST00000528462 A6NN06 94 aa9.52□□□□□ -0.89
PACSIN3-205ENST00000528462 SSPOA2VEC9 5147 aa9.51□□□□□ -0.89
PACSIN3-205ENST00000528462 PSPHP1O15172 72 aa9.5□□□□□ -0.89
PACSIN3-205ENST00000528462 CRCT1Q9UGL9 99 aa9.5□□□□□ -0.89
PACSIN3-205ENST00000528462 SVIPQ8NHG7 77 aa9.49□□□□□ -0.89
PACSIN3-205ENST00000528462 UQCR11O14957 56 aa9.47□□□□□ -0.89
PACSIN3-205ENST00000528462 PLAC4Q8WY50 150 aa9.45□□□□□ -0.9
PACSIN3-205ENST00000528462 KRTAP19-6Q3LI70 58 aa9.44□□□□□ -0.9
PACSIN3-205ENST00000528462 A0A0D9SG42 100 aa9.38□□□□□ -0.91
PACSIN3-205ENST00000528462 KRTAP9-6A0A140TA67 174 aa9.33□□□□□ -0.92
PACSIN3-205ENST00000528462 A8MU10 97 aa9.32□□□□□ -0.92
PACSIN3-205ENST00000528462 MIR22HGQ0VDD5 57 aa9.29□□□□□ -0.92
PACSIN3-205ENST00000528462 KRTAP12-1P59990 96 aa9.28□□□□□ -0.92
PACSIN3-205ENST00000528462 KRTAP10-5P60370 271 aa9.27□□□□□ -0.93
PACSIN3-205ENST00000528462 FCGBPQ9Y6R7 5405 aaPredicted RBP9.24□□□□□ -0.93
PACSIN3-205ENST00000528462 A6NED7 52 aa9.24□□□□□ -0.93
PACSIN3-205ENST00000528462 KRTAP12-2P59991 146 aa9.2□□□□□ -0.94
PACSIN3-205ENST00000528462 MT1XP80297 61 aa9.2□□□□□ -0.94
PACSIN3-205ENST00000528462 SPINT4Q6UDR6 99 aa9.2□□□□□ -0.94
PACSIN3-205ENST00000528462 PRO2289Q9P1D8 64 aa9.2□□□□□ -0.94
PACSIN3-205ENST00000528462 CAMK2N1Q7Z7J9 78 aa9.14□□□□□ -0.95
PACSIN3-205ENST00000528462 CDC42SE1Q9NRR8 79 aa9.03□□□□□ -0.96
PACSIN3-205ENST00000528462 K7ERS5 55 aa8.99□□□□□ -0.97
PACSIN3-205ENST00000528462 BRK1Q8WUW1 75 aa8.95□□□□□ -0.98
PACSIN3-205ENST00000528462 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.8□□□□□ -1
PACSIN3-205ENST00000528462 PRO0628Q9UI54 55 aa8.8□□□□□ -1
PACSIN3-205ENST00000528462 C10orf95Q9H7T3 257 aa8.79□□□□□ -1
PACSIN3-205ENST00000528462 MACF1Q9UPN3 7388 aaKnown RBP8.79□□□□□ -1
PACSIN3-205ENST00000528462 KRTAP10-7P60409 375 aaPredicted RBP8.78□□□□□ -1
PACSIN3-205ENST00000528462 KRTAP10-12P60413 245 aa8.77□□□□□ -1.01
PACSIN3-205ENST00000528462 TNP1P09430 55 aa8.65□□□□□ -1.03
PACSIN3-205ENST00000528462 KMT2DO14686 5537 aa8.63□□□□□ -1.03
PACSIN3-205ENST00000528462 SYNE2Q8WXH0 6885 aaKnown RBP8.59□□□□□ -1.03
PACSIN3-205ENST00000528462 KRTAP4-8A0A0G2JLE6 195 aa8.56□□□□□ -1.04
PACSIN3-205ENST00000528462 KRTAP4-8Q9BYQ9 185 aa8.56□□□□□ -1.04
PACSIN3-205ENST00000528462 KRTAP25-1Q3LHN0 102 aa8.53□□□□□ -1.04
PACSIN3-205ENST00000528462 ROMO1P60602 79 aa8.52□□□□□ -1.04
PACSIN3-205ENST00000528462 KRTAP6-3Q3LI67 103 aa8.49□□□□□ -1.05
PACSIN3-205ENST00000528462 KRTAP9-7A8MTY7 169 aa8.48□□□□□ -1.05
PACSIN3-205ENST00000528462 PMAIP1Q13794 54 aa8.48□□□□□ -1.05
PACSIN3-205ENST00000528462 KRTAP8-1Q8IUC2 63 aa8.48□□□□□ -1.05
PACSIN3-205ENST00000528462 KRTAP5-9P26371 169 aa8.43□□□□□ -1.06
PACSIN3-205ENST00000528462 LCE3AQ5TA76 89 aa8.34□□□□□ -1.07
PACSIN3-205ENST00000528462 KRTAP23-1A1A580 65 aa8.3□□□□□ -1.08
PACSIN3-205ENST00000528462 SPRR2FQ96RM1 72 aa8.27□□□□□ -1.09
PACSIN3-205ENST00000528462 KRTAP19-7Q3SYF9 63 aa8.22□□□□□ -1.09
PACSIN3-205ENST00000528462 MUC12Q9UKN1 5478 aa8.2□□□□□ -1.1
PACSIN3-205ENST00000528462 KRTAP19-5Q3LI72 72 aa8.17□□□□□ -1.1
PACSIN3-205ENST00000528462 KTN1-AS1Q86SY8 53 aa8.14□□□□□ -1.11
PACSIN3-205ENST00000528462 PP632Q6XCG6 107 aa8.14□□□□□ -1.11
PACSIN3-205ENST00000528462 MDN1Q9NU22 5596 aa8.13□□□□□ -1.11
PACSIN3-205ENST00000528462 MT1EP04732 61 aa8.11□□□□□ -1.11
PACSIN3-205ENST00000528462 KRTAP12-3P60328 96 aa8.05□□□□□ -1.12
PACSIN3-205ENST00000528462 LCE1AQ5T7P2 110 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms