RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 CSAG1Q6PB30 78 aa7.8□□□□□ -1.16
SMCO4-204ENST00000527149 KRTAP9-3Q9BYQ3 159 aa7.8□□□□□ -1.16
SMCO4-204ENST00000527149 C20orf197Q8N268 126 aa7.78□□□□□ -1.16
SMCO4-204ENST00000527149 USH2AO75445 5202 aa7.74□□□□□ -1.17
SMCO4-204ENST00000527149 COX7CP15954 63 aa7.72□□□□□ -1.17
SMCO4-204ENST00000527149 NDUFC1O43677 76 aa7.7□□□□□ -1.18
SMCO4-204ENST00000527149 LCE2BO14633 110 aa7.69□□□□□ -1.18
SMCO4-204ENST00000527149 FSIP2Q5CZC0 6907 aa7.69□□□□□ -1.18
SMCO4-204ENST00000527149 SPANXA2-OT1Q8N9U9 137 aa7.66□□□□□ -1.18
SMCO4-204ENST00000527149 SSPOA2VEC9 5147 aa7.65□□□□□ -1.19
SMCO4-204ENST00000527149 CYSTM1Q9H1C7 97 aa7.63□□□□□ -1.19
SMCO4-204ENST00000527149 ANAPC13Q9BS18 74 aa7.62□□□□□ -1.19
SMCO4-204ENST00000527149 H0YAA0 97 aa7.61□□□□□ -1.19
SMCO4-204ENST00000527149 ACYP2P14621 99 aa7.61□□□□□ -1.19
SMCO4-204ENST00000527149 CRCT1Q9UGL9 99 aa7.59□□□□□ -1.19
SMCO4-204ENST00000527149 KRTAP9-6A0A140TA67 174 aa7.58□□□□□ -1.2
SMCO4-204ENST00000527149 H7BZZ5 65 aa7.57□□□□□ -1.2
SMCO4-204ENST00000527149 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
SMCO4-204ENST00000527149 SPRR2GQ9BYE4 73 aa7.52□□□□□ -1.21
SMCO4-204ENST00000527149 CCDC179H3BU77 68 aa7.5□□□□□ -1.21
SMCO4-204ENST00000527149 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
SMCO4-204ENST00000527149 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
SMCO4-204ENST00000527149 CHKB-CPT1BH3BT56 60 aa7.45□□□□□ -1.22
SMCO4-204ENST00000527149 CRIPTQ9P021 101 aa7.45□□□□□ -1.22
SMCO4-204ENST00000527149 P0C880 135 aa7.43□□□□□ -1.22
SMCO4-204ENST00000527149 KRTAP19-8Q3LI54 63 aa7.43□□□□□ -1.22
SMCO4-204ENST00000527149 COA5Q86WW8 74 aa7.43□□□□□ -1.22
SMCO4-204ENST00000527149 SPTSSBQ8NFR3 76 aa7.42□□□□□ -1.22
SMCO4-204ENST00000527149 MT1BP07438 61 aa7.39□□□□□ -1.23
SMCO4-204ENST00000527149 KRTAP19-6Q3LI70 58 aa7.35□□□□□ -1.23
SMCO4-204ENST00000527149 FCGBPQ9Y6R7 5405 aaPredicted RBP7.34□□□□□ -1.23
SMCO4-204ENST00000527149 Q5VV11 94 aa7.32□□□□□ -1.24
SMCO4-204ENST00000527149 ATP5EP56381 51 aaPredicted RBP7.26□□□□□ -1.25
SMCO4-204ENST00000527149 R4GN34 69 aa7.25□□□□□ -1.25
SMCO4-204ENST00000527149 M0QZ58 72 aa7.23□□□□□ -1.25
SMCO4-204ENST00000527149 TMEM258P61165 79 aa7.22□□□□□ -1.25
SMCO4-204ENST00000527149 KRTAP10-5P60370 271 aa7.12□□□□□ -1.27
SMCO4-204ENST00000527149 KRTAP13-4Q3LI77 160 aa7.12□□□□□ -1.27
SMCO4-204ENST00000527149 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
SMCO4-204ENST00000527149 LINC01554Q52M75 96 aa7.08□□□□□ -1.28
SMCO4-204ENST00000527149 A6NN06 94 aa7.07□□□□□ -1.28
SMCO4-204ENST00000527149 SEC61GP60059 68 aa7.06□□□□□ -1.28
SMCO4-204ENST00000527149 SERP1Q9Y6X1 66 aa7.05□□□□□ -1.28
SMCO4-204ENST00000527149 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
SMCO4-204ENST00000527149 MT1XP80297 61 aa7.01□□□□□ -1.29
SMCO4-204ENST00000527149 A0A1B0GU69 56 aa6.99□□□□□ -1.29
SMCO4-204ENST00000527149 MACF1Q9UPN3 7388 aaKnown RBP6.97□□□□□ -1.29
SMCO4-204ENST00000527149 A0A1B0GU33 70 aa6.97□□□□□ -1.29
SMCO4-204ENST00000527149 PCP4P48539 62 aa6.97□□□□□ -1.29
SMCO4-204ENST00000527149 LINC01558Q9Y6Z2 57 aa6.94□□□□□ -1.3
SMCO4-204ENST00000527149 SPATA8Q6RVD6 105 aa6.92□□□□□ -1.3
SMCO4-204ENST00000527149 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.3
SMCO4-204ENST00000527149 KRTAP9-7A8MTY7 169 aa6.86□□□□□ -1.31
SMCO4-204ENST00000527149 PRR15LQ9BU68 103 aa6.85□□□□□ -1.31
SMCO4-204ENST00000527149 A0A0D9SG42 100 aa6.84□□□□□ -1.31
SMCO4-204ENST00000527149 SYNE2Q8WXH0 6885 aaKnown RBP6.8□□□□□ -1.32
SMCO4-204ENST00000527149 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
SMCO4-204ENST00000527149 A8MU10 97 aa6.76□□□□□ -1.33
SMCO4-204ENST00000527149 SMIM26A0A096LP01 95 aa6.75□□□□□ -1.33
SMCO4-204ENST00000527149 KRTAP12-2P59991 146 aa6.75□□□□□ -1.33
SMCO4-204ENST00000527149 Q1T7F1 81 aa6.73□□□□□ -1.33
SMCO4-204ENST00000527149 KMT2DO14686 5537 aa6.72□□□□□ -1.33
SMCO4-204ENST00000527149 KRTAP6-3Q3LI67 103 aa6.72□□□□□ -1.33
SMCO4-204ENST00000527149 CAMK2N1Q7Z7J9 78 aa6.71□□□□□ -1.34
SMCO4-204ENST00000527149 V9GYY9 64 aa6.7□□□□□ -1.34
SMCO4-204ENST00000527149 RPS28P62857 69 aaKnown RBP6.69□□□□□ -1.34
SMCO4-204ENST00000527149 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
SMCO4-204ENST00000527149 KRTAP10-7P60409 375 aaPredicted RBP6.68□□□□□ -1.34
SMCO4-204ENST00000527149 UQCR11O14957 56 aa6.66□□□□□ -1.34
SMCO4-204ENST00000527149 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
SMCO4-204ENST00000527149 PSPHP1O15172 72 aa6.64□□□□□ -1.35
SMCO4-204ENST00000527149 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
SMCO4-204ENST00000527149 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
SMCO4-204ENST00000527149 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
SMCO4-204ENST00000527149 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
SMCO4-204ENST00000527149 MIR22HGQ0VDD5 57 aa6.55□□□□□ -1.36
SMCO4-204ENST00000527149 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
SMCO4-204ENST00000527149 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
SMCO4-204ENST00000527149 MDN1Q9NU22 5596 aa6.44□□□□□ -1.38
SMCO4-204ENST00000527149 SPRR2FQ96RM1 72 aa6.43□□□□□ -1.38
SMCO4-204ENST00000527149 A6NED7 52 aa6.41□□□□□ -1.38
SMCO4-204ENST00000527149 NEBP20929 6669 aa6.4□□□□□ -1.38
SMCO4-204ENST00000527149 K7ERS5 55 aa6.29□□□□□ -1.4
SMCO4-204ENST00000527149 TNP1P09430 55 aa6.29□□□□□ -1.4
SMCO4-204ENST00000527149 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
SMCO4-204ENST00000527149 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
SMCO4-204ENST00000527149 SPRR2EP22531 72 aa6.25□□□□□ -1.41
SMCO4-204ENST00000527149 SPRR2BP35325 72 aa6.25□□□□□ -1.41
SMCO4-204ENST00000527149 SPRR2AP35326 72 aa6.25□□□□□ -1.41
SMCO4-204ENST00000527149 CDC42SE1Q9NRR8 79 aa6.24□□□□□ -1.41
SMCO4-204ENST00000527149 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
SMCO4-204ENST00000527149 MT1EP04732 61 aa6.18□□□□□ -1.42
SMCO4-204ENST00000527149 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
SMCO4-204ENST00000527149 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
SMCO4-204ENST00000527149 KRTAP19-3Q7Z4W3 81 aa6.04□□□□□ -1.44
SMCO4-204ENST00000527149 SPRR2DP22532 72 aa6.03□□□□□ -1.44
SMCO4-204ENST00000527149 KRTAP20-1Q3LI63 56 aa6.03□□□□□ -1.44
SMCO4-204ENST00000527149 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
SMCO4-204ENST00000527149 ROMO1P60602 79 aa6.01□□□□□ -1.45
SMCO4-204ENST00000527149 MT1LQ93083 61 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms