RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 IMUPQ9GZP8 106 aa3.21□□□□□ -1.9
CD44-214ENST00000525211 TP53AIP1Q9HCN2 124 aa3.21□□□□□ -1.9
CD44-214ENST00000525211 TRAV22A0A0B4J277 110 aa3.2□□□□□ -1.9
CD44-214ENST00000525211 KLKP1Q107X0 134 aa3.2□□□□□ -1.9
CD44-214ENST00000525211 COX6B2Q6YFQ2 88 aa3.2□□□□□ -1.9
CD44-214ENST00000525211 CYP4F30PQ9H0H9 118 aa3.2□□□□□ -1.9
CD44-214ENST00000525211 LINC00208Q96KT6 92 aa3.18□□□□□ -1.9
CD44-214ENST00000525211 A0A0U1RQV1 116 aa3.17□□□□□ -1.9
CD44-214ENST00000525211 FAM236DA0A1B0GTK5 79 aa3.17□□□□□ -1.9
CD44-214ENST00000525211 FAM236CP0DP71 79 aa3.17□□□□□ -1.9
CD44-214ENST00000525211 KRTAP10-6P60371 365 aaPredicted RBP3.17□□□□□ -1.9
CD44-214ENST00000525211 RBM12B-AS1Q9P1G2 102 aa3.17□□□□□ -1.9
CD44-214ENST00000525211 SCGB1A1P11684 91 aa3.16□□□□□ -1.9
CD44-214ENST00000525211 C1orf64Q8NEQ6 169 aa3.16□□□□□ -1.9
CD44-214ENST00000525211 TRAV7A0A075B6U4 112 aa3.15□□□□□ -1.91
CD44-214ENST00000525211 LOC101927531A0A1B0GV80 90 aa3.15□□□□□ -1.91
CD44-214ENST00000525211 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
CD44-214ENST00000525211 KRTAP9-8Q9BYQ0 159 aa3.14□□□□□ -1.91
CD44-214ENST00000525211 H1FX-AS1Q4G0G2 97 aa3.13□□□□□ -1.91
CD44-214ENST00000525211 C5orf47Q569G3 176 aa3.13□□□□□ -1.91
CD44-214ENST00000525211 M0R2T5 61 aa3.12□□□□□ -1.91
CD44-214ENST00000525211 ATOX1O00244 68 aa3.12□□□□□ -1.91
CD44-214ENST00000525211 CYSTM1Q9H1C7 97 aa3.12□□□□□ -1.91
CD44-214ENST00000525211 SNURFQ9Y675 71 aa3.12□□□□□ -1.91
CD44-214ENST00000525211 MT2AP02795 61 aa3.11□□□□□ -1.91
CD44-214ENST00000525211 MP68P56378 58 aa3.11□□□□□ -1.91
CD44-214ENST00000525211 MT1FP04733 61 aa3.1□□□□□ -1.91
CD44-214ENST00000525211 SERP2Q8N6R1 65 aa3.1□□□□□ -1.91
CD44-214ENST00000525211 H3BPC8 53 aa3.09□□□□□ -1.91
CD44-214ENST00000525211 LCA10Q71F78 164 aa3.09□□□□□ -1.91
CD44-214ENST00000525211 C20orf197Q8N268 126 aa3.09□□□□□ -1.91
CD44-214ENST00000525211 SMIM20Q8N5G0 67 aa3.08□□□□□ -1.92
CD44-214ENST00000525211 COX7CP15954 63 aa3.06□□□□□ -1.92
CD44-214ENST00000525211 S4R3F8 94 aa3.06□□□□□ -1.92
CD44-214ENST00000525211 CCDC179H3BU77 68 aa3.04□□□□□ -1.92
CD44-214ENST00000525211 KRTAP5-3Q6L8H2 238 aa3.04□□□□□ -1.92
CD44-214ENST00000525211 DMAC1Q96GE9 116 aa3.04□□□□□ -1.92
CD44-214ENST00000525211 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
CD44-214ENST00000525211 ANAPC13Q9BS18 74 aa3.03□□□□□ -1.92
CD44-214ENST00000525211 H7BZZ5 65 aa3.01□□□□□ -1.93
CD44-214ENST00000525211 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
CD44-214ENST00000525211 A8MUN3 132 aa2.99□□□□□ -1.93
CD44-214ENST00000525211 CSAG1Q6PB30 78 aa2.99□□□□□ -1.93
CD44-214ENST00000525211 USH2AO75445 5202 aa2.97□□□□□ -1.93
CD44-214ENST00000525211 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
CD44-214ENST00000525211 SPANXA2-OT1Q8N9U9 137 aa2.97□□□□□ -1.93
CD44-214ENST00000525211 NDUFC1O43677 76 aa2.96□□□□□ -1.94
CD44-214ENST00000525211 MT3P25713 68 aa2.96□□□□□ -1.94
CD44-214ENST00000525211 ACYP2P14621 99 aa2.95□□□□□ -1.94
CD44-214ENST00000525211 FCGBPQ9Y6R7 5405 aaPredicted RBP2.94□□□□□ -1.94
CD44-214ENST00000525211 P0C880 135 aa2.94□□□□□ -1.94
CD44-214ENST00000525211 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
CD44-214ENST00000525211 ADM2Q7Z4H4 148 aa2.93□□□□□ -1.94
CD44-214ENST00000525211 COA5Q86WW8 74 aa2.93□□□□□ -1.94
CD44-214ENST00000525211 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
CD44-214ENST00000525211 NDUFAF8A1L188 74 aa2.92□□□□□ -1.94
CD44-214ENST00000525211 H0YAA0 97 aa2.9□□□□□ -1.95
CD44-214ENST00000525211 MT1BP07438 61 aa2.9□□□□□ -1.95
CD44-214ENST00000525211 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
CD44-214ENST00000525211 CHKB-CPT1BH3BT56 60 aa2.88□□□□□ -1.95
CD44-214ENST00000525211 KRTAP19-8Q3LI54 63 aa2.87□□□□□ -1.95
CD44-214ENST00000525211 NEBP20929 6669 aa2.85□□□□□ -1.95
CD44-214ENST00000525211 KRTAP13-4Q3LI77 160 aa2.85□□□□□ -1.95
CD44-214ENST00000525211 TMEM258P61165 79 aa2.83□□□□□ -1.96
CD44-214ENST00000525211 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
CD44-214ENST00000525211 SPTSSBQ8NFR3 76 aa2.82□□□□□ -1.96
CD44-214ENST00000525211 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
CD44-214ENST00000525211 M0QZ58 72 aa2.8□□□□□ -1.96
CD44-214ENST00000525211 CRIPTQ9P021 101 aa2.8□□□□□ -1.96
CD44-214ENST00000525211 ATP5EP56381 51 aaPredicted RBP2.79□□□□□ -1.96
CD44-214ENST00000525211 Q5VV11 94 aa2.79□□□□□ -1.96
CD44-214ENST00000525211 R4GN34 69 aa2.78□□□□□ -1.96
CD44-214ENST00000525211 MUC12Q9UKN1 5478 aa2.78□□□□□ -1.96
CD44-214ENST00000525211 LINC01554Q52M75 96 aa2.77□□□□□ -1.97
CD44-214ENST00000525211 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
CD44-214ENST00000525211 SPATA8Q6RVD6 105 aa2.76□□□□□ -1.97
CD44-214ENST00000525211 SERP1Q9Y6X1 66 aa2.76□□□□□ -1.97
CD44-214ENST00000525211 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
CD44-214ENST00000525211 LINC01558Q9Y6Z2 57 aa2.75□□□□□ -1.97
CD44-214ENST00000525211 KRTAP10-5P60370 271 aa2.74□□□□□ -1.97
CD44-214ENST00000525211 MT1XP80297 61 aa2.74□□□□□ -1.97
CD44-214ENST00000525211 A0A1B0GU33 70 aa2.72□□□□□ -1.97
CD44-214ENST00000525211 A0A1B0GU69 56 aa2.72□□□□□ -1.97
CD44-214ENST00000525211 A0A0D9SG42 100 aa2.71□□□□□ -1.98
CD44-214ENST00000525211 A8MU10 97 aa2.71□□□□□ -1.98
CD44-214ENST00000525211 A6NN06 94 aa2.7□□□□□ -1.98
CD44-214ENST00000525211 SEC61GP60059 68 aa2.7□□□□□ -1.98
CD44-214ENST00000525211 KMT2DO14686 5537 aa2.7□□□□□ -1.98
CD44-214ENST00000525211 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
CD44-214ENST00000525211 KRTAP12-1P59990 96 aa2.68□□□□□ -1.98
CD44-214ENST00000525211 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
CD44-214ENST00000525211 PRR15LQ9BU68 103 aa2.68□□□□□ -1.98
CD44-214ENST00000525211 PSPHP1O15172 72 aa2.67□□□□□ -1.98
CD44-214ENST00000525211 KRTAP12-2P59991 146 aa2.67□□□□□ -1.98
CD44-214ENST00000525211 Q1T7F1 81 aa2.66□□□□□ -1.98
CD44-214ENST00000525211 SMIM26A0A096LP01 95 aa2.65□□□□□ -1.99
CD44-214ENST00000525211 KRTAP10-12P60413 245 aa2.65□□□□□ -1.99
CD44-214ENST00000525211 RPS28P62857 69 aaKnown RBP2.65□□□□□ -1.99
CD44-214ENST00000525211 KRTAP10-7P60409 375 aaPredicted RBP2.64□□□□□ -1.99
CD44-214ENST00000525211 SPINT4Q6UDR6 99 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms