RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 A0A1B0GW54 56 aa2.49□□□□□ -2.01
NEDD8-203ENST00000524927 KANTRA0A1W2PQU2 76 aa2.49□□□□□ -2.01
NEDD8-203ENST00000524927 H3BMG7 143 aa2.49□□□□□ -2.01
NEDD8-203ENST00000524927 MT1GP13640 62 aa2.49□□□□□ -2.01
NEDD8-203ENST00000524927 COX7BP24311 80 aa2.49□□□□□ -2.01
NEDD8-203ENST00000524927 LINC01545Q5VT33 79 aa2.49□□□□□ -2.01
NEDD8-203ENST00000524927 BRK1Q8WUW1 75 aa2.49□□□□□ -2.01
NEDD8-203ENST00000524927 PLAC4Q8WY50 150 aa2.49□□□□□ -2.01
NEDD8-203ENST00000524927 SEC11CQ9BY50 192 aa2.49□□□□□ -2.01
NEDD8-203ENST00000524927 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
NEDD8-203ENST00000524927 H0YAA0 97 aa2.48□□□□□ -2.01
NEDD8-203ENST00000524927 SRP19P09132 144 aaKnown RBP2.48□□□□□ -2.01
NEDD8-203ENST00000524927 FABP4P15090 132 aa2.48□□□□□ -2.01
NEDD8-203ENST00000524927 ADCYAP1P18509 176 aa2.48□□□□□ -2.01
NEDD8-203ENST00000524927 HIST1H2BOP23527 126 aa2.48□□□□□ -2.01
NEDD8-203ENST00000524927 HIST1H2BBP33778 126 aa2.48□□□□□ -2.01
NEDD8-203ENST00000524927 HIST1H2BDP58876 126 aa2.48□□□□□ -2.01
NEDD8-203ENST00000524927 HIST1H2BCP62807 126 aa2.48□□□□□ -2.01
NEDD8-203ENST00000524927 HIST2H2BEQ16778 126 aa2.48□□□□□ -2.01
NEDD8-203ENST00000524927 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.48□□□□□ -2.01
NEDD8-203ENST00000524927 HIST1H2BHQ93079 126 aa2.48□□□□□ -2.01
NEDD8-203ENST00000524927 HIST1H2BNQ99877 126 aa2.48□□□□□ -2.01
NEDD8-203ENST00000524927 HIST1H2BMQ99879 126 aa2.48□□□□□ -2.01
NEDD8-203ENST00000524927 OSTCQ9NRP0 149 aa2.48□□□□□ -2.01
NEDD8-203ENST00000524927 C11orf86A6NJI1 115 aa2.47□□□□□ -2.01
NEDD8-203ENST00000524927 TAX1BP3O14907 124 aa2.47□□□□□ -2.01
NEDD8-203ENST00000524927 UQCRQO14949 82 aa2.47□□□□□ -2.01
NEDD8-203ENST00000524927 MT1EP04732 61 aa2.47□□□□□ -2.01
NEDD8-203ENST00000524927 C3orf79P0CE67 100 aa2.47□□□□□ -2.01
NEDD8-203ENST00000524927 CSAG1Q6PB30 78 aa2.47□□□□□ -2.01
NEDD8-203ENST00000524927 UQCR10Q9UDW1 63 aa2.47□□□□□ -2.01
NEDD8-203ENST00000524927 LINC01549A6NIU2 74 aa2.46□□□□□ -2.02
NEDD8-203ENST00000524927 SNCGO76070 127 aa2.46□□□□□ -2.02
NEDD8-203ENST00000524927 TRACP01848 142 aa2.46□□□□□ -2.02
NEDD8-203ENST00000524927 SMIM7Q9BQ49 75 aa2.46□□□□□ -2.02
NEDD8-203ENST00000524927 V9GYV3 84 aa2.46□□□□□ -2.02
NEDD8-203ENST00000524927 A0A087WSZ3 146 aa2.45□□□□□ -2.02
NEDD8-203ENST00000524927 F8W1H4 67 aa2.45□□□□□ -2.02
NEDD8-203ENST00000524927 CCDC179H3BU77 68 aa2.45□□□□□ -2.02
NEDD8-203ENST00000524927 KRTAP12-4P60329 112 aa2.45□□□□□ -2.02
NEDD8-203ENST00000524927 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
NEDD8-203ENST00000524927 TRAV13-2A0A0B4J235 113 aa2.44□□□□□ -2.02
NEDD8-203ENST00000524927 A8MUN3 132 aa2.44□□□□□ -2.02
NEDD8-203ENST00000524927 HIST1H2BKO60814 126 aa2.44□□□□□ -2.02
NEDD8-203ENST00000524927 HIST1H2BJP06899 126 aa2.44□□□□□ -2.02
NEDD8-203ENST00000524927 ADIRFQ15847 76 aa2.44□□□□□ -2.02
NEDD8-203ENST00000524927 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
NEDD8-203ENST00000524927 NAA38Q9BRA0 125 aaKnown RBP2.44□□□□□ -2.02
NEDD8-203ENST00000524927 NHP2Q9NX24 153 aaKnown RBP2.44□□□□□ -2.02
NEDD8-203ENST00000524927 SMIM27A0A1W2PRY6 76 aa2.43□□□□□ -2.02
NEDD8-203ENST00000524927 HIST1H4AP62805 103 aaKnown RBP2.43□□□□□ -2.02
NEDD8-203ENST00000524927 TEN1Q86WV5 123 aa2.43□□□□□ -2.02
NEDD8-203ENST00000524927 HIST3H2BBQ8N257 126 aa2.43□□□□□ -2.02
NEDD8-203ENST00000524927 SERP1Q9Y6X1 66 aa2.43□□□□□ -2.02
NEDD8-203ENST00000524927 H3BT86 120 aa2.42□□□□□ -2.02
NEDD8-203ENST00000524927 K7EP34 96 aa2.42□□□□□ -2.02
NEDD8-203ENST00000524927 TMEM256-PLSCR3K7ERE1 68 aa2.42□□□□□ -2.02
NEDD8-203ENST00000524927 NPC2P61916 151 aa2.42□□□□□ -2.02
NEDD8-203ENST00000524927 TMEM170BQ5T4T1 132 aa2.42□□□□□ -2.02
NEDD8-203ENST00000524927 PDE6GP18545 87 aa2.41□□□□□ -2.02
NEDD8-203ENST00000524927 DSCR8Q96T75 97 aa2.41□□□□□ -2.02
NEDD8-203ENST00000524927 HIST1H2BLQ99880 126 aa2.41□□□□□ -2.02
NEDD8-203ENST00000524927 HBDP02042 147 aa2.4□□□□□ -2.03
NEDD8-203ENST00000524927 ATP5EP56381 51 aaPredicted RBP2.4□□□□□ -2.03
NEDD8-203ENST00000524927 MT1MQ8N339 61 aa2.4□□□□□ -2.03
NEDD8-203ENST00000524927 TTTY13Q9BZ97 58 aa2.39□□□□□ -2.03
NEDD8-203ENST00000524927 MYMXA0A1B0GTQ4 84 aa2.38□□□□□ -2.03
NEDD8-203ENST00000524927 COX7CP15954 63 aa2.38□□□□□ -2.03
NEDD8-203ENST00000524927 LINC01554Q52M75 96 aa2.38□□□□□ -2.03
NEDD8-203ENST00000524927 C7orf65Q6ZTY9 151 aa2.38□□□□□ -2.03
NEDD8-203ENST00000524927 MT-ATP8P03928 68 aa2.37□□□□□ -2.03
NEDD8-203ENST00000524927 KRTDAPP60985 99 aa2.37□□□□□ -2.03
NEDD8-203ENST00000524927 PMCHL1Q16048 86 aa2.37□□□□□ -2.03
NEDD8-203ENST00000524927 PMCHL2Q9BQD1 86 aa2.37□□□□□ -2.03
NEDD8-203ENST00000524927 KRTAP12-1P59990 96 aa2.36□□□□□ -2.03
NEDD8-203ENST00000524927 SPCS1Q9Y6A9 102 aa2.36□□□□□ -2.03
NEDD8-203ENST00000524927 IGKV3D-7A0A0C4DH55 119 aa2.35□□□□□ -2.03
NEDD8-203ENST00000524927 ATOX1O00244 68 aa2.35□□□□□ -2.03
NEDD8-203ENST00000524927 LEPROTO15243 131 aa2.35□□□□□ -2.03
NEDD8-203ENST00000524927 S4R3F8 94 aa2.35□□□□□ -2.03
NEDD8-203ENST00000524927 K7ERJ3 54 aa2.34□□□□□ -2.03
NEDD8-203ENST00000524927 PPDPFLQ8WWR9 84 aa2.34□□□□□ -2.03
NEDD8-203ENST00000524927 A0A1W2PPM0 123 aa2.33□□□□□ -2.04
NEDD8-203ENST00000524927 TIMM17BO60830 172 aa2.33□□□□□ -2.04
NEDD8-203ENST00000524927 SPATA45Q537H7 98 aa2.33□□□□□ -2.04
NEDD8-203ENST00000524927 LINC01546A6NGU7 62 aa2.32□□□□□ -2.04
NEDD8-203ENST00000524927 NDUFC1O43677 76 aa2.32□□□□□ -2.04
NEDD8-203ENST00000524927 IGKCP01834 107 aa2.32□□□□□ -2.04
NEDD8-203ENST00000524927 CHCHD1Q96BP2 118 aaKnown RBP2.32□□□□□ -2.04
NEDD8-203ENST00000524927 ACYP1P07311 99 aa2.31□□□□□ -2.04
NEDD8-203ENST00000524927 BVES-AS1Q5T3Y7 98 aa2.31□□□□□ -2.04
NEDD8-203ENST00000524927 BAGE3Q86Y29 109 aa2.31□□□□□ -2.04
NEDD8-203ENST00000524927 H3BUT2 72 aa2.3□□□□□ -2.04
NEDD8-203ENST00000524927 K7EQZ3 153 aa2.29□□□□□ -2.04
NEDD8-203ENST00000524927 SERP2Q8N6R1 65 aa2.29□□□□□ -2.04
NEDD8-203ENST00000524927 C18orf32Q8TCD1 76 aa2.29□□□□□ -2.04
NEDD8-203ENST00000524927 SYS1-DBNDD2H3BUS1 97 aa2.28□□□□□ -2.04
NEDD8-203ENST00000524927 KRTAP13-4Q3LI77 160 aa2.28□□□□□ -2.04
NEDD8-203ENST00000524927 ETDBQ3ZM63 59 aa2.28□□□□□ -2.04
NEDD8-203ENST00000524927 hADV29S1A0JD25 119 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms