RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 A0A087WWC5 75 aa0.64□□□□□ -2.31
CTNNA1-233ENST00000522052 TMEM218A2RU14 115 aa0.64□□□□□ -2.31
CTNNA1-233ENST00000522052 S100A3P33764 101 aa0.64□□□□□ -2.31
CTNNA1-233ENST00000522052 H3BQF6 201 aa0.63□□□□□ -2.31
CTNNA1-233ENST00000522052 RPS29P62273 56 aaKnown RBP0.63□□□□□ -2.31
CTNNA1-233ENST00000522052 HMGN3Q15651 99 aa0.63□□□□□ -2.31
CTNNA1-233ENST00000522052 LINC01590Q5TEZ4 76 aa0.63□□□□□ -2.31
CTNNA1-233ENST00000522052 CLPSL2Q6UWE3 100 aa0.63□□□□□ -2.31
CTNNA1-233ENST00000522052 MGPP08493 103 aa0.62□□□□□ -2.31
CTNNA1-233ENST00000522052 COX6CP09669 75 aa0.62□□□□□ -2.31
CTNNA1-233ENST00000522052 MT1GP13640 62 aa0.62□□□□□ -2.31
CTNNA1-233ENST00000522052 KRTDAPP60985 99 aa0.62□□□□□ -2.31
CTNNA1-233ENST00000522052 Q6JHZ5 121 aa0.62□□□□□ -2.31
CTNNA1-233ENST00000522052 PRO1854Q9UHT4 67 aa0.62□□□□□ -2.31
CTNNA1-233ENST00000522052 TRAV30A0A087WSZ9 112 aa0.61□□□□□ -2.31
CTNNA1-233ENST00000522052 IGLC1P0CG04 106 aa0.61□□□□□ -2.31
CTNNA1-233ENST00000522052 TRAPPC2P0DI81 140 aa0.61□□□□□ -2.31
CTNNA1-233ENST00000522052 TRAPPC2BP0DI82 140 aa0.61□□□□□ -2.31
CTNNA1-233ENST00000522052 SNRPGP62308 76 aaKnown RBP0.61□□□□□ -2.31
CTNNA1-233ENST00000522052 MT1MQ8N339 61 aa0.61□□□□□ -2.31
CTNNA1-233ENST00000522052 ABRACLQ9P1F3 81 aa0.61□□□□□ -2.31
CTNNA1-233ENST00000522052 ARL2-SNX15V9GYD0 113 aa0.61□□□□□ -2.31
CTNNA1-233ENST00000522052 CRYM-AS1A6NIL9 109 aa0.6□□□□□ -2.31
CTNNA1-233ENST00000522052 H0YAA0 97 aa0.6□□□□□ -2.31
CTNNA1-233ENST00000522052 BCE1O60756 84 aa0.6□□□□□ -2.31
CTNNA1-233ENST00000522052 MT1EP04732 61 aa0.6□□□□□ -2.31
CTNNA1-233ENST00000522052 Q5BKY6 102 aa0.6□□□□□ -2.31
CTNNA1-233ENST00000522052 KRTAP19-7Q3SYF9 63 aa0.59□□□□□ -2.31
CTNNA1-233ENST00000522052 SPCS1Q9Y6A9 102 aa0.59□□□□□ -2.31
CTNNA1-233ENST00000522052 hADV29S1A0JD25 119 aa0.58□□□□□ -2.32
CTNNA1-233ENST00000522052 SPRR4Q96PI1 79 aa0.58□□□□□ -2.32
CTNNA1-233ENST00000522052 SFTA2Q6UW10 78 aa0.57□□□□□ -2.32
CTNNA1-233ENST00000522052 S100A10P60903 97 aa0.56□□□□□ -2.32
CTNNA1-233ENST00000522052 SEC11AP67812 179 aa0.56□□□□□ -2.32
CTNNA1-233ENST00000522052 ACBD7Q8N6N7 88 aa0.56□□□□□ -2.32
CTNNA1-233ENST00000522052 M0R3E3 92 aa0.55□□□□□ -2.32
CTNNA1-233ENST00000522052 PKIAP61925 76 aa0.54□□□□□ -2.32
CTNNA1-233ENST00000522052 ARHGAP5-AS1Q96IT6 56 aa0.54□□□□□ -2.32
CTNNA1-233ENST00000522052 TP53AIP1Q9HCN2 124 aa0.54□□□□□ -2.32
CTNNA1-233ENST00000522052 GNGT2O14610 69 aa0.53□□□□□ -2.32
CTNNA1-233ENST00000522052 C6orf201Q7Z4U5 140 aa0.53□□□□□ -2.32
CTNNA1-233ENST00000522052 CMC2Q9NRP2 79 aa0.53□□□□□ -2.32
CTNNA1-233ENST00000522052 KRTAP6-2Q3LI66 62 aa0.52□□□□□ -2.33
CTNNA1-233ENST00000522052 S100A13Q99584 98 aa0.52□□□□□ -2.33
CTNNA1-233ENST00000522052 PRLHP81277 87 aa0.51□□□□□ -2.33
CTNNA1-233ENST00000522052 C10orf113Q5VZT2 155 aa0.51□□□□□ -2.33
CTNNA1-233ENST00000522052 Q8IZM0 81 aa0.51□□□□□ -2.33
CTNNA1-233ENST00000522052 MT-ATP8P03928 68 aa0.5□□□□□ -2.33
CTNNA1-233ENST00000522052 AP4S1Q9Y587 144 aa0.5□□□□□ -2.33
CTNNA1-233ENST00000522052 SNRPGP15A8MWD9 76 aa0.49□□□□□ -2.33
CTNNA1-233ENST00000522052 NDUFC1O43677 76 aa0.49□□□□□ -2.33
CTNNA1-233ENST00000522052 MPC2O95563 127 aa0.49□□□□□ -2.33
CTNNA1-233ENST00000522052 MT1LQ93083 61 aa0.49□□□□□ -2.33
CTNNA1-233ENST00000522052 TRBV25-1A0A075B6N4 114 aa0.47□□□□□ -2.33
CTNNA1-233ENST00000522052 M0R143 59 aa0.47□□□□□ -2.33
CTNNA1-233ENST00000522052 PMCHL2Q9BQD1 86 aa0.47□□□□□ -2.33
CTNNA1-233ENST00000522052 PRO1933Q9H354 126 aa0.47□□□□□ -2.33
CTNNA1-233ENST00000522052 TRBV6-1A0A0K0K1D8 114 aa0.46□□□□□ -2.34
CTNNA1-233ENST00000522052 C6orf48Q9UBA6 75 aa0.46□□□□□ -2.34
CTNNA1-233ENST00000522052 CACFD1Q9UGQ2 172 aa0.46□□□□□ -2.34
CTNNA1-233ENST00000522052 A0A0G2JND7 137 aa0.45□□□□□ -2.34
CTNNA1-233ENST00000522052 SMIM11AP58511 58 aa0.45□□□□□ -2.34
CTNNA1-233ENST00000522052 KRTAP6-1Q3LI64 71 aa0.45□□□□□ -2.34
CTNNA1-233ENST00000522052 LINC00959A0A1B0GUT2 108 aa0.44□□□□□ -2.34
CTNNA1-233ENST00000522052 ATOX1O00244 68 aa0.44□□□□□ -2.34
CTNNA1-233ENST00000522052 CFDP00746 253 aaPredicted RBP0.44□□□□□ -2.34
CTNNA1-233ENST00000522052 S100A8P05109 93 aa0.44□□□□□ -2.34
CTNNA1-233ENST00000522052 TRGV9Q99603 122 aa0.44□□□□□ -2.34
CTNNA1-233ENST00000522052 NDUFA1O15239 70 aa0.43□□□□□ -2.34
CTNNA1-233ENST00000522052 KRTAP19-5Q3LI72 72 aa0.43□□□□□ -2.34
CTNNA1-233ENST00000522052 H7BZZ5 65 aa0.42□□□□□ -2.34
CTNNA1-233ENST00000522052 IGLC2P0DOY2 106 aa0.41□□□□□ -2.34
CTNNA1-233ENST00000522052 PMCHL1Q16048 86 aa0.41□□□□□ -2.34
CTNNA1-233ENST00000522052 H1FX-AS1Q4G0G2 97 aa0.41□□□□□ -2.34
CTNNA1-233ENST00000522052 VAMP8Q9BV40 100 aa0.41□□□□□ -2.34
CTNNA1-233ENST00000522052 CRIPTQ9P021 101 aa0.41□□□□□ -2.34
CTNNA1-233ENST00000522052 TRAV21A0A0B4J279 112 aa0.4□□□□□ -2.35
CTNNA1-233ENST00000522052 TRBV7-4A0A0J9YYF1 115 aa0.4□□□□□ -2.35
CTNNA1-233ENST00000522052 C7orf77A4D0Y5 90 aa0.4□□□□□ -2.35
CTNNA1-233ENST00000522052 MT1AP04731 61 aa0.4□□□□□ -2.35
CTNNA1-233ENST00000522052 NMSQ5H8A3 153 aa0.4□□□□□ -2.35
CTNNA1-233ENST00000522052 SERP2Q8N6R1 65 aa0.4□□□□□ -2.35
CTNNA1-233ENST00000522052 A0A087WVE0 104 aa0.39□□□□□ -2.35
CTNNA1-233ENST00000522052 COL5A1-AS1Q5SY13 56 aa0.38□□□□□ -2.35
CTNNA1-233ENST00000522052 WFDC13Q8IUB5 93 aa0.38□□□□□ -2.35
CTNNA1-233ENST00000522052 CEBPZOSA8MTT3 80 aa0.37□□□□□ -2.35
CTNNA1-233ENST00000522052 SNHG12Q9BXW3 62 aa0.36□□□□□ -2.35
CTNNA1-233ENST00000522052 H3BVH4 76 aa0.35□□□□□ -2.35
CTNNA1-233ENST00000522052 TRBV7-7A0A0K0K1E9 115 aa0.34□□□□□ -2.36
CTNNA1-233ENST00000522052 SYS1-DBNDD2H3BUS1 97 aa0.34□□□□□ -2.36
CTNNA1-233ENST00000522052 M0QY20 66 aa0.34□□□□□ -2.36
CTNNA1-233ENST00000522052 ARMS2P0C7Q2 107 aa0.34□□□□□ -2.36
CTNNA1-233ENST00000522052 SPRR1AP35321 89 aa0.34□□□□□ -2.36
CTNNA1-233ENST00000522052 FAUP35544 74 aaKnown RBP0.33□□□□□ -2.36
CTNNA1-233ENST00000522052 ALKAL2Q6UX46 152 aa0.33□□□□□ -2.36
CTNNA1-233ENST00000522052 FXYD6Q9H0Q3 95 aa0.31□□□□□ -2.36
CTNNA1-233ENST00000522052 SPRR1BP22528 89 aa0.3□□□□□ -2.36
CTNNA1-233ENST00000522052 CRIP1P50238 77 aa0.3□□□□□ -2.36
CTNNA1-233ENST00000522052 DEFB107AQ8IZN7 70 aa0.3□□□□□ -2.36
CTNNA1-233ENST00000522052 NMES1Q9C002 83 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms