RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 S4R3F8 94 aa10.53□□□□□ -0.72
R3HCC1-208ENST00000522012 KRTAP9-6A0A140TA67 174 aa10.51□□□□□ -0.73
R3HCC1-208ENST00000522012 COA5Q86WW8 74 aa10.51□□□□□ -0.73
R3HCC1-208ENST00000522012 CHKB-CPT1BH3BT56 60 aa10.5□□□□□ -0.73
R3HCC1-208ENST00000522012 LCA10Q71F78 164 aa10.48□□□□□ -0.73
R3HCC1-208ENST00000522012 MT1HP80294 61 aa10.41□□□□□ -0.74
R3HCC1-208ENST00000522012 KRTAP3-3Q9BYR6 98 aa10.4□□□□□ -0.74
R3HCC1-208ENST00000522012 SERP1Q9Y6X1 66 aa10.39□□□□□ -0.75
R3HCC1-208ENST00000522012 M0R2T5 61 aa10.34□□□□□ -0.75
R3HCC1-208ENST00000522012 CSAG1Q6PB30 78 aa10.33□□□□□ -0.76
R3HCC1-208ENST00000522012 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
R3HCC1-208ENST00000522012 FLGP20930 4061 aaPredicted RBP10.28□□□□□ -0.76
R3HCC1-208ENST00000522012 LCE2DQ5TA82 110 aaPredicted RBP10.23□□□□□ -0.77
R3HCC1-208ENST00000522012 RPS28P62857 69 aaKnown RBP10.22□□□□□ -0.77
R3HCC1-208ENST00000522012 CRCT1Q9UGL9 99 aa10.11□□□□□ -0.79
R3HCC1-208ENST00000522012 SMIM26A0A096LP01 95 aa10.07□□□□□ -0.8
R3HCC1-208ENST00000522012 KRTAP10-6P60371 365 aaPredicted RBP10.07□□□□□ -0.8
R3HCC1-208ENST00000522012 ADM2Q7Z4H4 148 aa10.03□□□□□ -0.8
R3HCC1-208ENST00000522012 H0YAA0 97 aa10.02□□□□□ -0.8
R3HCC1-208ENST00000522012 FSIP2Q5CZC0 6907 aa10.02□□□□□ -0.81
R3HCC1-208ENST00000522012 LORP23490 312 aaPredicted RBP10□□□□□ -0.81
R3HCC1-208ENST00000522012 SEC61GP60059 68 aa10□□□□□ -0.81
R3HCC1-208ENST00000522012 LINC01558Q9Y6Z2 57 aa9.99□□□□□ -0.81
R3HCC1-208ENST00000522012 KRTAP9-8Q9BYQ0 159 aa9.97□□□□□ -0.81
R3HCC1-208ENST00000522012 A0A1B0GU69 56 aa9.97□□□□□ -0.81
R3HCC1-208ENST00000522012 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.82
R3HCC1-208ENST00000522012 V9GYY9 64 aa9.95□□□□□ -0.82
R3HCC1-208ENST00000522012 Q1T7F1 81 aa9.94□□□□□ -0.82
R3HCC1-208ENST00000522012 MT2AP02795 61 aa9.92□□□□□ -0.82
R3HCC1-208ENST00000522012 P0C880 135 aa9.92□□□□□ -0.82
R3HCC1-208ENST00000522012 PRR15LQ9BU68 103 aa9.89□□□□□ -0.83
R3HCC1-208ENST00000522012 KRTAP10-10P60014 251 aa9.87□□□□□ -0.83
R3HCC1-208ENST00000522012 MT1FP04733 61 aa9.87□□□□□ -0.83
R3HCC1-208ENST00000522012 PSPHP1O15172 72 aa9.82□□□□□ -0.84
R3HCC1-208ENST00000522012 A0A1B0GU33 70 aa9.75□□□□□ -0.85
R3HCC1-208ENST00000522012 CRIPTQ9P021 101 aa9.72□□□□□ -0.85
R3HCC1-208ENST00000522012 Q5VV11 94 aa9.7□□□□□ -0.86
R3HCC1-208ENST00000522012 R4GN34 69 aa9.7□□□□□ -0.86
R3HCC1-208ENST00000522012 M0QZ58 72 aa9.67□□□□□ -0.86
R3HCC1-208ENST00000522012 KRTAP9-3Q9BYQ3 159 aa9.62□□□□□ -0.87
R3HCC1-208ENST00000522012 KRTAP13-4Q3LI77 160 aa9.61□□□□□ -0.87
R3HCC1-208ENST00000522012 SPATA8Q6RVD6 105 aa9.61□□□□□ -0.87
R3HCC1-208ENST00000522012 UQCR11O14957 56 aa9.59□□□□□ -0.87
R3HCC1-208ENST00000522012 KRTAP19-1Q8IUB9 90 aa9.57□□□□□ -0.88
R3HCC1-208ENST00000522012 SPRR2GQ9BYE4 73 aa9.56□□□□□ -0.88
R3HCC1-208ENST00000522012 LINC01554Q52M75 96 aa9.53□□□□□ -0.88
R3HCC1-208ENST00000522012 A6NED7 52 aa9.52□□□□□ -0.88
R3HCC1-208ENST00000522012 MIR22HGQ0VDD5 57 aa9.47□□□□□ -0.89
R3HCC1-208ENST00000522012 A0A0D9SG42 100 aa9.46□□□□□ -0.89
R3HCC1-208ENST00000522012 A8MU10 97 aa9.42□□□□□ -0.9
R3HCC1-208ENST00000522012 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.42□□□□□ -0.9
R3HCC1-208ENST00000522012 KRTAP9-7A8MTY7 169 aa9.41□□□□□ -0.9
R3HCC1-208ENST00000522012 LCE2BO14633 110 aa9.41□□□□□ -0.9
R3HCC1-208ENST00000522012 KRTAP19-8Q3LI54 63 aa9.36□□□□□ -0.91
R3HCC1-208ENST00000522012 USH2AO75445 5202 aa9.3□□□□□ -0.92
R3HCC1-208ENST00000522012 SSPOA2VEC9 5147 aa9.3□□□□□ -0.92
R3HCC1-208ENST00000522012 CDC42SE1Q9NRR8 79 aa9.28□□□□□ -0.92
R3HCC1-208ENST00000522012 A6NN06 94 aa9.27□□□□□ -0.93
R3HCC1-208ENST00000522012 MT1BP07438 61 aa9.26□□□□□ -0.93
R3HCC1-208ENST00000522012 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
R3HCC1-208ENST00000522012 PLAC4Q8WY50 150 aa9.25□□□□□ -0.93
R3HCC1-208ENST00000522012 KRTAP12-1P59990 96 aa9.23□□□□□ -0.93
R3HCC1-208ENST00000522012 KRTAP12-2P59991 146 aa9.21□□□□□ -0.94
R3HCC1-208ENST00000522012 BRK1Q8WUW1 75 aa9.21□□□□□ -0.94
R3HCC1-208ENST00000522012 FCGBPQ9Y6R7 5405 aaPredicted RBP9.14□□□□□ -0.95
R3HCC1-208ENST00000522012 K7ERS5 55 aa9.11□□□□□ -0.95
R3HCC1-208ENST00000522012 CAMK2N1Q7Z7J9 78 aa9.07□□□□□ -0.96
R3HCC1-208ENST00000522012 SVIPQ8NHG7 77 aa9.01□□□□□ -0.97
R3HCC1-208ENST00000522012 MACF1Q9UPN3 7388 aaKnown RBP8.93□□□□□ -0.98
R3HCC1-208ENST00000522012 MT1XP80297 61 aa8.9□□□□□ -0.98
R3HCC1-208ENST00000522012 KRTAP19-6Q3LI70 58 aa8.9□□□□□ -0.99
R3HCC1-208ENST00000522012 KRTAP10-5P60370 271 aa8.88□□□□□ -0.99
R3HCC1-208ENST00000522012 PRO2289Q9P1D8 64 aa8.87□□□□□ -0.99
R3HCC1-208ENST00000522012 SYNE2Q8WXH0 6885 aaKnown RBP8.83□□□□□ -1
R3HCC1-208ENST00000522012 PRO0628Q9UI54 55 aa8.82□□□□□ -1
R3HCC1-208ENST00000522012 C10orf95Q9H7T3 257 aa8.76□□□□□ -1.01
R3HCC1-208ENST00000522012 PMAIP1Q13794 54 aa8.7□□□□□ -1.02
R3HCC1-208ENST00000522012 KRTAP6-3Q3LI67 103 aa8.7□□□□□ -1.02
R3HCC1-208ENST00000522012 ROMO1P60602 79 aa8.67□□□□□ -1.02
R3HCC1-208ENST00000522012 TNP1P09430 55 aa8.56□□□□□ -1.04
R3HCC1-208ENST00000522012 KRTAP10-7P60409 375 aaPredicted RBP8.54□□□□□ -1.04
R3HCC1-208ENST00000522012 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
R3HCC1-208ENST00000522012 KRTAP10-12P60413 245 aa8.44□□□□□ -1.06
R3HCC1-208ENST00000522012 NEBP20929 6669 aa8.33□□□□□ -1.08
R3HCC1-208ENST00000522012 MUC12Q9UKN1 5478 aa8.3□□□□□ -1.08
R3HCC1-208ENST00000522012 KRTAP4-8A0A0G2JLE6 195 aa8.29□□□□□ -1.08
R3HCC1-208ENST00000522012 KRTAP4-8Q9BYQ9 185 aa8.29□□□□□ -1.08
R3HCC1-208ENST00000522012 LCE3AQ5TA76 89 aa8.24□□□□□ -1.09
R3HCC1-208ENST00000522012 KRTAP20-1Q3LI63 56 aa8.24□□□□□ -1.09
R3HCC1-208ENST00000522012 KTN1-AS1Q86SY8 53 aa8.2□□□□□ -1.1
R3HCC1-208ENST00000522012 PRAC1Q96KF2 57 aa8.18□□□□□ -1.1
R3HCC1-208ENST00000522012 KRTAP23-1A1A580 65 aa8.16□□□□□ -1.1
R3HCC1-208ENST00000522012 KRTAP5-9P26371 169 aa8.14□□□□□ -1.11
R3HCC1-208ENST00000522012 KRTAP8-1Q8IUC2 63 aa8.14□□□□□ -1.11
R3HCC1-208ENST00000522012 KMT2DO14686 5537 aa8.13□□□□□ -1.11
R3HCC1-208ENST00000522012 PP632Q6XCG6 107 aa8.12□□□□□ -1.11
R3HCC1-208ENST00000522012 MDN1Q9NU22 5596 aa8□□□□□ -1.13
R3HCC1-208ENST00000522012 KRTAP19-5Q3LI72 72 aa8□□□□□ -1.13
R3HCC1-208ENST00000522012 KRTAP19-7Q3SYF9 63 aa7.93□□□□□ -1.14
R3HCC1-208ENST00000522012 KRTAP2-3P0C7H8 128 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms