RNA–Protein interactions for RNA: ENST00000521604.6

TCEA1-208, Transcript of transcription elongation factor A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-208ENST00000521604 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
TCEA1-208ENST00000521604 MYCBP2O75592 4640 aa9.14□□□□□ -0.95
TCEA1-208ENST00000521604 HSPG2P98160 4391 aa9.13□□□□□ -0.95
TCEA1-208ENST00000521604 RPL37P61927 97 aaKnown RBP9.12□□□□□ -0.95
TCEA1-208ENST00000521604 KRTAP10-8P60410 259 aa9.11□□□□□ -0.95
TCEA1-208ENST00000521604 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
TCEA1-208ENST00000521604 A0A1B0GVY2 172 aa9.07□□□□□ -0.96
TCEA1-208ENST00000521604 FAT3Q8TDW7 4589 aa9.06□□□□□ -0.96
TCEA1-208ENST00000521604 P0C880 135 aa9.05□□□□□ -0.96
TCEA1-208ENST00000521604 C10orf95Q9H7T3 257 aa9.04□□□□□ -0.96
TCEA1-208ENST00000521604 TPRXLQ17RH7 258 aa9.03□□□□□ -0.96
TCEA1-208ENST00000521604 S4R3F8 94 aa9.01□□□□□ -0.97
TCEA1-208ENST00000521604 TNXBP22105 4242 aa8.96□□□□□ -0.98
TCEA1-208ENST00000521604 XP32Q5T750 250 aa8.94□□□□□ -0.98
TCEA1-208ENST00000521604 SPINT4Q6UDR6 99 aa8.94□□□□□ -0.98
TCEA1-208ENST00000521604 KRTAP12-2P59991 146 aa8.91□□□□□ -0.98
TCEA1-208ENST00000521604 KMT2CQ8NEZ4 4911 aaKnown RBP8.89□□□□□ -0.99
TCEA1-208ENST00000521604 LPAP08519 4548 aa8.88□□□□□ -0.99
TCEA1-208ENST00000521604 RYR2Q92736 4967 aa8.83□□□□□ -1
TCEA1-208ENST00000521604 Q5VSD8 79 aa8.81□□□□□ -1
TCEA1-208ENST00000521604 KRTAP12-1P59990 96 aa8.77□□□□□ -1.01
TCEA1-208ENST00000521604 KRTAP17-1Q9BYP8 105 aa8.72□□□□□ -1.01
TCEA1-208ENST00000521604 LRP2P98164 4655 aa8.71□□□□□ -1.01
TCEA1-208ENST00000521604 NDUFAF8A1L188 74 aa8.67□□□□□ -1.02
TCEA1-208ENST00000521604 KRTAP15-1Q3LI76 137 aa8.66□□□□□ -1.02
TCEA1-208ENST00000521604 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
TCEA1-208ENST00000521604 RYR3Q15413 4870 aa8.57□□□□□ -1.04
TCEA1-208ENST00000521604 KIAA1109Q2LD37 5005 aa8.56□□□□□ -1.04
TCEA1-208ENST00000521604 M0QZ58 72 aa8.55□□□□□ -1.04
TCEA1-208ENST00000521604 RYR1P21817 5038 aa8.53□□□□□ -1.04
TCEA1-208ENST00000521604 KRTAP21-3Q3LHN1 58 aa8.45□□□□□ -1.06
TCEA1-208ENST00000521604 R4GN34 69 aa8.43□□□□□ -1.06
TCEA1-208ENST00000521604 ABCA13Q86UQ4 5058 aa8.42□□□□□ -1.06
TCEA1-208ENST00000521604 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
TCEA1-208ENST00000521604 EPPK1P58107 5090 aaKnown RBP8.3□□□□□ -1.08
TCEA1-208ENST00000521604 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
TCEA1-208ENST00000521604 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
TCEA1-208ENST00000521604 KRTAP4-1Q9BYQ7 146 aa8.17□□□□□ -1.1
TCEA1-208ENST00000521604 MUC17Q685J3 4493 aa8.14□□□□□ -1.11
TCEA1-208ENST00000521604 MUC2Q02817 5179 aa8.09□□□□□ -1.11
TCEA1-208ENST00000521604 SEC61BP60468 96 aaKnown RBP8.08□□□□□ -1.12
TCEA1-208ENST00000521604 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
TCEA1-208ENST00000521604 KRTAP19-2Q3LHN2 52 aa7.93□□□□□ -1.14
TCEA1-208ENST00000521604 J3QL48 77 aa7.86□□□□□ -1.15
TCEA1-208ENST00000521604 LUZP6Q538Z0 58 aa7.86□□□□□ -1.15
TCEA1-208ENST00000521604 PP632Q6XCG6 107 aa7.86□□□□□ -1.15
TCEA1-208ENST00000521604 HERC2O95714 4834 aa7.76□□□□□ -1.17
TCEA1-208ENST00000521604 PCLOQ9Y6V0 5065 aa7.72□□□□□ -1.17
TCEA1-208ENST00000521604 FLGP20930 4061 aaPredicted RBP7.71□□□□□ -1.18
TCEA1-208ENST00000521604 TNP1P09430 55 aa7.71□□□□□ -1.18
TCEA1-208ENST00000521604 HERC1Q15751 4861 aa7.67□□□□□ -1.18
TCEA1-208ENST00000521604 FAT4Q6V0I7 4981 aa7.63□□□□□ -1.19
TCEA1-208ENST00000521604 A0A0A0MQY5 61 aa7.58□□□□□ -1.2
TCEA1-208ENST00000521604 BIRC6Q9NR09 4857 aa7.51□□□□□ -1.21
TCEA1-208ENST00000521604 SPRR5A0A1B0GTR4 108 aa7.45□□□□□ -1.22
TCEA1-208ENST00000521604 KRTAP23-1A1A580 65 aa7.43□□□□□ -1.22
TCEA1-208ENST00000521604 RNF213Q63HN8 5207 aa7.42□□□□□ -1.22
TCEA1-208ENST00000521604 KRTAP19-1Q8IUB9 90 aa7.38□□□□□ -1.23
TCEA1-208ENST00000521604 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
TCEA1-208ENST00000521604 M0R2T5 61 aa7.36□□□□□ -1.23
TCEA1-208ENST00000521604 LCE3AQ5TA76 89 aa7.36□□□□□ -1.23
TCEA1-208ENST00000521604 SPRR2GQ9BYE4 73 aa7.34□□□□□ -1.23
TCEA1-208ENST00000521604 HMCN2Q8NDA2 5059 aa7.3□□□□□ -1.24
TCEA1-208ENST00000521604 UBR4Q5T4S7 5183 aa7.29□□□□□ -1.24
TCEA1-208ENST00000521604 KRTAP10-10P60014 251 aa7.22□□□□□ -1.25
TCEA1-208ENST00000521604 MT1FP04733 61 aa7.18□□□□□ -1.26
TCEA1-208ENST00000521604 MT1HP80294 61 aa7.16□□□□□ -1.26
TCEA1-208ENST00000521604 MT2AP02795 61 aa7.13□□□□□ -1.27
TCEA1-208ENST00000521604 KRTAP9-8Q9BYQ0 159 aa7.04□□□□□ -1.28
TCEA1-208ENST00000521604 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.28
TCEA1-208ENST00000521604 KRTAP10-5P60370 271 aa7□□□□□ -1.29
TCEA1-208ENST00000521604 MT1XP80297 61 aa6.98□□□□□ -1.29
TCEA1-208ENST00000521604 MT1BP07438 61 aa6.95□□□□□ -1.3
TCEA1-208ENST00000521604 KRTAP12-3P60328 96 aa6.94□□□□□ -1.3
TCEA1-208ENST00000521604 KRTAP19-8Q3LI54 63 aa6.93□□□□□ -1.3
TCEA1-208ENST00000521604 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
TCEA1-208ENST00000521604 KRTAP10-7P60409 375 aaPredicted RBP6.89□□□□□ -1.31
TCEA1-208ENST00000521604 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
TCEA1-208ENST00000521604 INE1O15225 51 aa6.71□□□□□ -1.33
TCEA1-208ENST00000521604 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
TCEA1-208ENST00000521604 KMT2DO14686 5537 aa6.7□□□□□ -1.34
TCEA1-208ENST00000521604 USH2AO75445 5202 aa6.67□□□□□ -1.34
TCEA1-208ENST00000521604 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
TCEA1-208ENST00000521604 LCE3CQ5T5A8 94 aa6.53□□□□□ -1.36
TCEA1-208ENST00000521604 FSIP2Q5CZC0 6907 aa6.51□□□□□ -1.37
TCEA1-208ENST00000521604 KRTAP4-8A0A0G2JLE6 195 aa6.49□□□□□ -1.37
TCEA1-208ENST00000521604 KRTAP4-8Q9BYQ9 185 aa6.49□□□□□ -1.37
TCEA1-208ENST00000521604 LCE2BO14633 110 aa6.47□□□□□ -1.37
TCEA1-208ENST00000521604 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
TCEA1-208ENST00000521604 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
TCEA1-208ENST00000521604 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.42
TCEA1-208ENST00000521604 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
TCEA1-208ENST00000521604 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
TCEA1-208ENST00000521604 KRTAP2-1Q9BYU5 128 aa6.13□□□□□ -1.43
TCEA1-208ENST00000521604 MT1LQ93083 61 aa6.04□□□□□ -1.44
TCEA1-208ENST00000521604 LCE2AQ5TA79 106 aaPredicted RBP6.02□□□□□ -1.45
TCEA1-208ENST00000521604 MT1EP04732 61 aa5.99□□□□□ -1.45
TCEA1-208ENST00000521604 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
TCEA1-208ENST00000521604 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
TCEA1-208ENST00000521604 SSPOA2VEC9 5147 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms