RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
TRAM1-203ENST00000520700 MT2AP02795 61 aa8.28□□□□□ -1.08
TRAM1-203ENST00000520700 SPANXA2-OT1Q8N9U9 137 aa8.24□□□□□ -1.09
TRAM1-203ENST00000520700 ANAPC13Q9BS18 74 aa8.23□□□□□ -1.09
TRAM1-203ENST00000520700 NDUFC1O43677 76 aa8.21□□□□□ -1.1
TRAM1-203ENST00000520700 MT1FP04733 61 aa8.21□□□□□ -1.1
TRAM1-203ENST00000520700 ACYP2P14621 99 aa8.19□□□□□ -1.1
TRAM1-203ENST00000520700 KRTAP10-10P60014 251 aa8.17□□□□□ -1.1
TRAM1-203ENST00000520700 KRTAP9-2Q9BYQ4 174 aa8.17□□□□□ -1.1
TRAM1-203ENST00000520700 H7BZZ5 65 aa8.11□□□□□ -1.11
TRAM1-203ENST00000520700 KRTAP9-3Q9BYQ3 159 aa8.11□□□□□ -1.11
TRAM1-203ENST00000520700 H0YAA0 97 aa8.09□□□□□ -1.11
TRAM1-203ENST00000520700 CYSTM1Q9H1C7 97 aa8.09□□□□□ -1.11
TRAM1-203ENST00000520700 CCDC179H3BU77 68 aa8.05□□□□□ -1.12
TRAM1-203ENST00000520700 SPTSSBQ8NFR3 76 aa8.01□□□□□ -1.13
TRAM1-203ENST00000520700 CHKB-CPT1BH3BT56 60 aa7.98□□□□□ -1.13
TRAM1-203ENST00000520700 USH2AO75445 5202 aa7.96□□□□□ -1.13
TRAM1-203ENST00000520700 LCE2BO14633 110 aa7.94□□□□□ -1.14
TRAM1-203ENST00000520700 CRIPTQ9P021 101 aa7.94□□□□□ -1.14
TRAM1-203ENST00000520700 ADM2Q7Z4H4 148 aa7.92□□□□□ -1.14
TRAM1-203ENST00000520700 COA5Q86WW8 74 aa7.92□□□□□ -1.14
TRAM1-203ENST00000520700 FSIP2Q5CZC0 6907 aa7.89□□□□□ -1.15
TRAM1-203ENST00000520700 KRTAP19-1Q8IUB9 90 aa7.89□□□□□ -1.15
TRAM1-203ENST00000520700 SPRR2GQ9BYE4 73 aa7.89□□□□□ -1.15
TRAM1-203ENST00000520700 ATP5EP56381 51 aaPredicted RBP7.87□□□□□ -1.15
TRAM1-203ENST00000520700 TMEM258P61165 79 aa7.81□□□□□ -1.16
TRAM1-203ENST00000520700 CRCT1Q9UGL9 99 aa7.81□□□□□ -1.16
TRAM1-203ENST00000520700 P0C880 135 aa7.8□□□□□ -1.16
TRAM1-203ENST00000520700 SSPOA2VEC9 5147 aa7.8□□□□□ -1.16
TRAM1-203ENST00000520700 KRTAP19-8Q3LI54 63 aa7.77□□□□□ -1.17
TRAM1-203ENST00000520700 KRTAP9-6A0A140TA67 174 aa7.75□□□□□ -1.17
TRAM1-203ENST00000520700 R4GN34 69 aa7.69□□□□□ -1.18
TRAM1-203ENST00000520700 Q5VV11 94 aa7.68□□□□□ -1.18
TRAM1-203ENST00000520700 MT1BP07438 61 aa7.67□□□□□ -1.18
TRAM1-203ENST00000520700 M0QZ58 72 aa7.63□□□□□ -1.19
TRAM1-203ENST00000520700 PCP4P48539 62 aa7.63□□□□□ -1.19
TRAM1-203ENST00000520700 SEC61GP60059 68 aa7.63□□□□□ -1.19
TRAM1-203ENST00000520700 KRTAP19-6Q3LI70 58 aa7.63□□□□□ -1.19
TRAM1-203ENST00000520700 SERP1Q9Y6X1 66 aa7.61□□□□□ -1.19
TRAM1-203ENST00000520700 FCGBPQ9Y6R7 5405 aaPredicted RBP7.53□□□□□ -1.2
TRAM1-203ENST00000520700 A0A1B0GU69 56 aa7.51□□□□□ -1.21
TRAM1-203ENST00000520700 LINC01558Q9Y6Z2 57 aa7.5□□□□□ -1.21
TRAM1-203ENST00000520700 A0A1B0GU33 70 aa7.47□□□□□ -1.21
TRAM1-203ENST00000520700 KRTAP13-4Q3LI77 160 aa7.46□□□□□ -1.22
TRAM1-203ENST00000520700 PLAC4Q8WY50 150 aa7.46□□□□□ -1.22
TRAM1-203ENST00000520700 A6NN06 94 aa7.45□□□□□ -1.22
TRAM1-203ENST00000520700 LINC01554Q52M75 96 aa7.45□□□□□ -1.22
TRAM1-203ENST00000520700 PRR15LQ9BU68 103 aa7.43□□□□□ -1.22
TRAM1-203ENST00000520700 KRTAP10-5P60370 271 aa7.42□□□□□ -1.22
TRAM1-203ENST00000520700 RPS28P62857 69 aaKnown RBP7.37□□□□□ -1.23
TRAM1-203ENST00000520700 SPATA8Q6RVD6 105 aa7.33□□□□□ -1.24
TRAM1-203ENST00000520700 V9GYY9 64 aa7.33□□□□□ -1.24
TRAM1-203ENST00000520700 Q1T7F1 81 aa7.31□□□□□ -1.24
TRAM1-203ENST00000520700 SMIM26A0A096LP01 95 aa7.3□□□□□ -1.24
TRAM1-203ENST00000520700 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
TRAM1-203ENST00000520700 MT1XP80297 61 aa7.29□□□□□ -1.24
TRAM1-203ENST00000520700 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.24□□□□□ -1.25
TRAM1-203ENST00000520700 A0A0D9SG42 100 aa7.23□□□□□ -1.25
TRAM1-203ENST00000520700 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
TRAM1-203ENST00000520700 UQCR11O14957 56 aa7.21□□□□□ -1.26
TRAM1-203ENST00000520700 KRTAP4-6Q9BYQ5 205 aa7.21□□□□□ -1.26
TRAM1-203ENST00000520700 MACF1Q9UPN3 7388 aaKnown RBP7.2□□□□□ -1.26
TRAM1-203ENST00000520700 KRTAP12-1P59990 96 aa7.18□□□□□ -1.26
TRAM1-203ENST00000520700 A8MU10 97 aa7.14□□□□□ -1.27
TRAM1-203ENST00000520700 PSPHP1O15172 72 aa7.13□□□□□ -1.27
TRAM1-203ENST00000520700 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
TRAM1-203ENST00000520700 CAMK2N1Q7Z7J9 78 aa7.12□□□□□ -1.27
TRAM1-203ENST00000520700 KRTAP12-2P59991 146 aa7.1□□□□□ -1.27
TRAM1-203ENST00000520700 MIR22HGQ0VDD5 57 aa7.06□□□□□ -1.28
TRAM1-203ENST00000520700 SYNE2Q8WXH0 6885 aaKnown RBP7.04□□□□□ -1.28
TRAM1-203ENST00000520700 KRTAP9-7A8MTY7 169 aa7.01□□□□□ -1.29
TRAM1-203ENST00000520700 KRTAP6-3Q3LI67 103 aa6.97□□□□□ -1.29
TRAM1-203ENST00000520700 KRTAP10-12P60413 245 aa6.96□□□□□ -1.3
TRAM1-203ENST00000520700 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
TRAM1-203ENST00000520700 A6NED7 52 aa6.93□□□□□ -1.3
TRAM1-203ENST00000520700 KMT2DO14686 5537 aa6.87□□□□□ -1.31
TRAM1-203ENST00000520700 K7ERS5 55 aa6.85□□□□□ -1.31
TRAM1-203ENST00000520700 KRTAP5-9P26371 169 aa6.84□□□□□ -1.31
TRAM1-203ENST00000520700 C10orf95Q9H7T3 257 aa6.82□□□□□ -1.32
TRAM1-203ENST00000520700 KRTAP4-8A0A0G2JLE6 195 aa6.81□□□□□ -1.32
TRAM1-203ENST00000520700 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
TRAM1-203ENST00000520700 KRTAP8-1Q8IUC2 63 aa6.79□□□□□ -1.32
TRAM1-203ENST00000520700 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
TRAM1-203ENST00000520700 TNP1P09430 55 aa6.72□□□□□ -1.33
TRAM1-203ENST00000520700 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
TRAM1-203ENST00000520700 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
TRAM1-203ENST00000520700 NEBP20929 6669 aa6.63□□□□□ -1.35
TRAM1-203ENST00000520700 MDN1Q9NU22 5596 aa6.59□□□□□ -1.35
TRAM1-203ENST00000520700 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
TRAM1-203ENST00000520700 KRTAP19-7Q3SYF9 63 aa6.53□□□□□ -1.36
TRAM1-203ENST00000520700 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
TRAM1-203ENST00000520700 LCE1AQ5T7P2 110 aa6.48□□□□□ -1.37
TRAM1-203ENST00000520700 ROMO1P60602 79 aa6.47□□□□□ -1.37
TRAM1-203ENST00000520700 SPRR2EP22531 72 aa6.45□□□□□ -1.38
TRAM1-203ENST00000520700 SPRR2BP35325 72 aa6.45□□□□□ -1.38
TRAM1-203ENST00000520700 SPRR2AP35326 72 aa6.45□□□□□ -1.38
TRAM1-203ENST00000520700 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
TRAM1-203ENST00000520700 MT1EP04732 61 aa6.44□□□□□ -1.38
TRAM1-203ENST00000520700 KRTAP19-5Q3LI72 72 aa6.44□□□□□ -1.38
TRAM1-203ENST00000520700 BRK1Q8WUW1 75 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 234.4 ms