RNA–Protein interactions for RNA: ENST00000520464.1

CREBRF-204, Transcript of CREB3 regulatory factor, humanhuman

TSL 2

Gene CREBRF, Length 5,163 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-204ENST00000520464 RYR3Q15413 4870 aa3.98□□□□□ -1.77
CREBRF-204ENST00000520464 DNAH10Q8IVF4 4471 aa3.98□□□□□ -1.77
CREBRF-204ENST00000520464 KRTAP17-1Q9BYP8 105 aa3.98□□□□□ -1.77
CREBRF-204ENST00000520464 KMT2CQ8NEZ4 4911 aaKnown RBP3.96□□□□□ -1.78
CREBRF-204ENST00000520464 DNAH1Q9P2D7 4330 aa3.95□□□□□ -1.78
CREBRF-204ENST00000520464 DNAH3Q8TD57 4116 aa3.95□□□□□ -1.78
CREBRF-204ENST00000520464 KRTAP3-3Q9BYR6 98 aa3.92□□□□□ -1.78
CREBRF-204ENST00000520464 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
CREBRF-204ENST00000520464 DNAH2Q9P225 4427 aa3.91□□□□□ -1.78
CREBRF-204ENST00000520464 KRTAP3-2Q9BYR7 98 aa3.9□□□□□ -1.79
CREBRF-204ENST00000520464 VPS13DQ5THJ4 4388 aa3.9□□□□□ -1.79
CREBRF-204ENST00000520464 RYR2Q92736 4967 aa3.89□□□□□ -1.79
CREBRF-204ENST00000520464 KRTAP4-5Q9BYR2 181 aa3.88□□□□□ -1.79
CREBRF-204ENST00000520464 DNAH17Q9UFH2 4485 aa3.87□□□□□ -1.79
CREBRF-204ENST00000520464 SVEP1Q4LDE5 3571 aa3.87□□□□□ -1.79
CREBRF-204ENST00000520464 DNAH6Q9C0G6 4158 aa3.85□□□□□ -1.79
CREBRF-204ENST00000520464 PLECQ15149 4684 aaKnown RBP3.84□□□□□ -1.79
CREBRF-204ENST00000520464 HERC2O95714 4834 aa3.84□□□□□ -1.8
CREBRF-204ENST00000520464 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
CREBRF-204ENST00000520464 SACSQ9NZJ4 4579 aa3.81□□□□□ -1.8
CREBRF-204ENST00000520464 DNAH7Q8WXX0 4024 aa3.81□□□□□ -1.8
CREBRF-204ENST00000520464 DNAH5Q8TE73 4624 aa3.81□□□□□ -1.8
CREBRF-204ENST00000520464 LCE2DQ5TA82 110 aaPredicted RBP3.79□□□□□ -1.8
CREBRF-204ENST00000520464 LYSTQ99698 3801 aa3.78□□□□□ -1.8
CREBRF-204ENST00000520464 DYNC1H1Q14204 4646 aaKnown RBP3.77□□□□□ -1.81
CREBRF-204ENST00000520464 HYDINQ4G0P3 5121 aa3.74□□□□□ -1.81
CREBRF-204ENST00000520464 COL7A1Q02388 2944 aa3.74□□□□□ -1.81
CREBRF-204ENST00000520464 PCLOQ9Y6V0 5065 aa3.72□□□□□ -1.81
CREBRF-204ENST00000520464 DNAH8Q96JB1 4490 aa3.71□□□□□ -1.82
CREBRF-204ENST00000520464 KRTAP10-12P60413 245 aa3.7□□□□□ -1.82
CREBRF-204ENST00000520464 HECTD4Q9Y4D8 3996 aa3.69□□□□□ -1.82
CREBRF-204ENST00000520464 FAT2Q9NYQ8 4349 aa3.68□□□□□ -1.82
CREBRF-204ENST00000520464 STARD9Q9P2P6 4700 aa3.64□□□□□ -1.83
CREBRF-204ENST00000520464 SRRM2Q9UQ35 2752 aaKnown RBP3.64□□□□□ -1.83
CREBRF-204ENST00000520464 LRP1BQ9NZR2 4599 aa3.64□□□□□ -1.83
CREBRF-204ENST00000520464 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
CREBRF-204ENST00000520464 MT1HP80294 61 aa3.6□□□□□ -1.83
CREBRF-204ENST00000520464 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.83
CREBRF-204ENST00000520464 RYR1P21817 5038 aa3.58□□□□□ -1.84
CREBRF-204ENST00000520464 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
CREBRF-204ENST00000520464 CSMD3Q7Z407 3707 aa3.57□□□□□ -1.84
CREBRF-204ENST00000520464 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
CREBRF-204ENST00000520464 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
CREBRF-204ENST00000520464 HSPG2P98160 4391 aa3.54□□□□□ -1.84
CREBRF-204ENST00000520464 MT2AP02795 61 aa3.53□□□□□ -1.84
CREBRF-204ENST00000520464 KMT2AQ03164 3969 aa3.52□□□□□ -1.85
CREBRF-204ENST00000520464 HERC1Q15751 4861 aa3.52□□□□□ -1.85
CREBRF-204ENST00000520464 ABCA13Q86UQ4 5058 aa3.51□□□□□ -1.85
CREBRF-204ENST00000520464 KIAA1109Q2LD37 5005 aa3.51□□□□□ -1.85
CREBRF-204ENST00000520464 FRAS1Q86XX4 4008 aa3.51□□□□□ -1.85
CREBRF-204ENST00000520464 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
CREBRF-204ENST00000520464 APOBP04114 4563 aaKnown RBP3.48□□□□□ -1.85
CREBRF-204ENST00000520464 PKD1P98161 4303 aa3.44□□□□□ -1.86
CREBRF-204ENST00000520464 FAT1Q14517 4588 aa3.44□□□□□ -1.86
CREBRF-204ENST00000520464 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
CREBRF-204ENST00000520464 VPS13BQ7Z7G8 4022 aa3.43□□□□□ -1.86
CREBRF-204ENST00000520464 PKHD1P08F94 4074 aa3.43□□□□□ -1.86
CREBRF-204ENST00000520464 MT1FP04733 61 aa3.42□□□□□ -1.86
CREBRF-204ENST00000520464 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
CREBRF-204ENST00000520464 FAT3Q8TDW7 4589 aa3.4□□□□□ -1.86
CREBRF-204ENST00000520464 MYCBP2O75592 4640 aa3.39□□□□□ -1.87
CREBRF-204ENST00000520464 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
CREBRF-204ENST00000520464 KRTAP19-1Q8IUB9 90 aa3.3□□□□□ -1.88
CREBRF-204ENST00000520464 PKHD1L1Q86WI1 4243 aa3.29□□□□□ -1.88
CREBRF-204ENST00000520464 HMCN2Q8NDA2 5059 aa3.27□□□□□ -1.89
CREBRF-204ENST00000520464 LRP1Q07954 4544 aaKnown RBP3.27□□□□□ -1.89
CREBRF-204ENST00000520464 UBR4Q5T4S7 5183 aa3.27□□□□□ -1.89
CREBRF-204ENST00000520464 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
CREBRF-204ENST00000520464 LCE2CQ5TA81 110 aa3.26□□□□□ -1.89
CREBRF-204ENST00000520464 KRTAP9-8Q9BYQ0 159 aa3.25□□□□□ -1.89
CREBRF-204ENST00000520464 KRTAP9-6A0A140TA67 174 aa3.22□□□□□ -1.89
CREBRF-204ENST00000520464 MT1BP07438 61 aa3.2□□□□□ -1.9
CREBRF-204ENST00000520464 MUC17Q685J3 4493 aa3.2□□□□□ -1.9
CREBRF-204ENST00000520464 KRTAP19-5Q3LI72 72 aa3.19□□□□□ -1.9
CREBRF-204ENST00000520464 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
CREBRF-204ENST00000520464 KRTAP9-2Q9BYQ4 174 aa3.19□□□□□ -1.9
CREBRF-204ENST00000520464 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
CREBRF-204ENST00000520464 MT1XP80297 61 aa3.18□□□□□ -1.9
CREBRF-204ENST00000520464 KRTAP19-2Q3LHN2 52 aa3.17□□□□□ -1.9
CREBRF-204ENST00000520464 CRCT1Q9UGL9 99 aa3.16□□□□□ -1.9
CREBRF-204ENST00000520464 LCE2BO14633 110 aa3.15□□□□□ -1.91
CREBRF-204ENST00000520464 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
CREBRF-204ENST00000520464 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
CREBRF-204ENST00000520464 TNXBP22105 4242 aa3.13□□□□□ -1.91
CREBRF-204ENST00000520464 LCE2AQ5TA79 106 aaPredicted RBP3.13□□□□□ -1.91
CREBRF-204ENST00000520464 RNF213Q63HN8 5207 aa3.1□□□□□ -1.91
CREBRF-204ENST00000520464 FAT4Q6V0I7 4981 aa3.07□□□□□ -1.92
CREBRF-204ENST00000520464 MT1GP13640 62 aa3.04□□□□□ -1.92
CREBRF-204ENST00000520464 FLGP20930 4061 aaPredicted RBP3.01□□□□□ -1.93
CREBRF-204ENST00000520464 KRTAP19-6Q3LI70 58 aa3□□□□□ -1.93
CREBRF-204ENST00000520464 SPRR2EP22531 72 aa2.99□□□□□ -1.93
CREBRF-204ENST00000520464 SPRR2BP35325 72 aa2.99□□□□□ -1.93
CREBRF-204ENST00000520464 SPRR2AP35326 72 aa2.99□□□□□ -1.93
CREBRF-204ENST00000520464 LRP2P98164 4655 aa2.95□□□□□ -1.94
CREBRF-204ENST00000520464 SPRR2DP22532 72 aa2.91□□□□□ -1.94
CREBRF-204ENST00000520464 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
CREBRF-204ENST00000520464 MT1LQ93083 61 aa2.9□□□□□ -1.95
CREBRF-204ENST00000520464 MUC2Q02817 5179 aa2.89□□□□□ -1.95
CREBRF-204ENST00000520464 MT1EP04732 61 aa2.89□□□□□ -1.95
CREBRF-204ENST00000520464 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms