RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 UQCR11O14957 56 aa13.42□□□□□ -0.26
COL13A1-213ENST00000520267 SPATA8Q6RVD6 105 aa13.42□□□□□ -0.26
COL13A1-213ENST00000520267 MIR22HGQ0VDD5 57 aa13.38□□□□□ -0.27
COL13A1-213ENST00000520267 KRTAP4-5Q9BYR2 181 aa13.2□□□□□ -0.3
COL13A1-213ENST00000520267 PRAC1Q96KF2 57 aa13.19□□□□□ -0.3
COL13A1-213ENST00000520267 ADM2Q7Z4H4 148 aa13.13□□□□□ -0.31
COL13A1-213ENST00000520267 TPRXLQ17RH7 258 aa13.11□□□□□ -0.31
COL13A1-213ENST00000520267 KRTAP3-3Q9BYR6 98 aa13.11□□□□□ -0.31
COL13A1-213ENST00000520267 A0A1B0GU33 70 aa13.09□□□□□ -0.31
COL13A1-213ENST00000520267 H0YAA0 97 aa13.09□□□□□ -0.31
COL13A1-213ENST00000520267 H1FX-AS1Q4G0G2 97 aa13.07□□□□□ -0.32
COL13A1-213ENST00000520267 LRP2P98164 4655 aa13.04□□□□□ -0.32
COL13A1-213ENST00000520267 ABCA13Q86UQ4 5058 aa13.03□□□□□ -0.32
COL13A1-213ENST00000520267 LPAP08519 4548 aa13.02□□□□□ -0.32
COL13A1-213ENST00000520267 LINC01554Q52M75 96 aa13.01□□□□□ -0.33
COL13A1-213ENST00000520267 S4R3F8 94 aa13.01□□□□□ -0.33
COL13A1-213ENST00000520267 KRTAP10-6P60371 365 aaPredicted RBP12.88□□□□□ -0.35
COL13A1-213ENST00000520267 KRTAP3-2Q9BYR7 98 aa12.83□□□□□ -0.36
COL13A1-213ENST00000520267 CSAG1Q6PB30 78 aa12.76□□□□□ -0.37
COL13A1-213ENST00000520267 BIRC6Q9NR09 4857 aa12.74□□□□□ -0.37
COL13A1-213ENST00000520267 J3QL48 77 aa12.72□□□□□ -0.37
COL13A1-213ENST00000520267 HERC2O95714 4834 aa12.69□□□□□ -0.38
COL13A1-213ENST00000520267 KRTAP13-4Q3LI77 160 aa12.69□□□□□ -0.38
COL13A1-213ENST00000520267 P0C880 135 aa12.68□□□□□ -0.38
COL13A1-213ENST00000520267 SEC61BP60468 96 aaKnown RBP12.63□□□□□ -0.39
COL13A1-213ENST00000520267 MUC17Q685J3 4493 aa12.56□□□□□ -0.4
COL13A1-213ENST00000520267 H3BS24 57 aa12.53□□□□□ -0.4
COL13A1-213ENST00000520267 A0A0D9SG42 100 aa12.53□□□□□ -0.4
COL13A1-213ENST00000520267 K7ERS5 55 aa12.52□□□□□ -0.41
COL13A1-213ENST00000520267 KRTAP4-1Q9BYQ7 146 aa12.52□□□□□ -0.41
COL13A1-213ENST00000520267 KRTAP25-1Q3LHN0 102 aa12.38□□□□□ -0.43
COL13A1-213ENST00000520267 KRTAP19-2Q3LHN2 52 aa12.26□□□□□ -0.45
COL13A1-213ENST00000520267 M0QZ58 72 aa12.24□□□□□ -0.45
COL13A1-213ENST00000520267 KRTAP12-2P59991 146 aa12.24□□□□□ -0.45
COL13A1-213ENST00000520267 ROMO1P60602 79 aa12.22□□□□□ -0.45
COL13A1-213ENST00000520267 PCLOQ9Y6V0 5065 aa12.2□□□□□ -0.46
COL13A1-213ENST00000520267 KRTAP12-1P59990 96 aa12.18□□□□□ -0.46
COL13A1-213ENST00000520267 SPINT4Q6UDR6 99 aa12.14□□□□□ -0.47
COL13A1-213ENST00000520267 CRIPTQ9P021 101 aa12.14□□□□□ -0.47
COL13A1-213ENST00000520267 HERC1Q15751 4861 aa12.07□□□□□ -0.48
COL13A1-213ENST00000520267 R4GN34 69 aa12.04□□□□□ -0.48
COL13A1-213ENST00000520267 MUC2Q02817 5179 aa12.04□□□□□ -0.48
COL13A1-213ENST00000520267 LORP23490 312 aaPredicted RBP12.03□□□□□ -0.48
COL13A1-213ENST00000520267 HMCN2Q8NDA2 5059 aa11.98□□□□□ -0.49
COL13A1-213ENST00000520267 FLGP20930 4061 aaPredicted RBP11.88□□□□□ -0.51
COL13A1-213ENST00000520267 C10orf95Q9H7T3 257 aa11.79□□□□□ -0.52
COL13A1-213ENST00000520267 LCE2CQ5TA81 110 aa11.66□□□□□ -0.54
COL13A1-213ENST00000520267 FAT4Q6V0I7 4981 aa11.5□□□□□ -0.57
COL13A1-213ENST00000520267 RNF213Q63HN8 5207 aa11.46□□□□□ -0.57
COL13A1-213ENST00000520267 KRTAP15-1Q3LI76 137 aa11.45□□□□□ -0.58
COL13A1-213ENST00000520267 UBR4Q5T4S7 5183 aa11.42□□□□□ -0.58
COL13A1-213ENST00000520267 CAMK2N1Q7Z7J9 78 aa11.37□□□□□ -0.59
COL13A1-213ENST00000520267 MT1HP80294 61 aa11.35□□□□□ -0.59
COL13A1-213ENST00000520267 M0R2T5 61 aa11.32□□□□□ -0.6
COL13A1-213ENST00000520267 NDUFAF8A1L188 74 aa11.3□□□□□ -0.6
COL13A1-213ENST00000520267 SPRR2GQ9BYE4 73 aa11.18□□□□□ -0.62
COL13A1-213ENST00000520267 KRTAP19-1Q8IUB9 90 aa11.16□□□□□ -0.62
COL13A1-213ENST00000520267 MT2AP02795 61 aa11.09□□□□□ -0.63
COL13A1-213ENST00000520267 MT1FP04733 61 aa11.08□□□□□ -0.64
COL13A1-213ENST00000520267 KRTAP9-8Q9BYQ0 159 aa11.06□□□□□ -0.64
COL13A1-213ENST00000520267 KRTAP10-10P60014 251 aa11.03□□□□□ -0.64
COL13A1-213ENST00000520267 PLAC4Q8WY50 150 aa10.97□□□□□ -0.65
COL13A1-213ENST00000520267 PP632Q6XCG6 107 aa10.93□□□□□ -0.66
COL13A1-213ENST00000520267 TNP1P09430 55 aa10.91□□□□□ -0.66
COL13A1-213ENST00000520267 KRTAP19-8Q3LI54 63 aa10.75□□□□□ -0.69
COL13A1-213ENST00000520267 KRTAP23-1A1A580 65 aa10.69□□□□□ -0.7
COL13A1-213ENST00000520267 MT1BP07438 61 aa10.64□□□□□ -0.71
COL13A1-213ENST00000520267 KRTAP9-3Q9BYQ3 159 aa10.61□□□□□ -0.71
COL13A1-213ENST00000520267 KRTAP10-5P60370 271 aa10.48□□□□□ -0.73
COL13A1-213ENST00000520267 MT1XP80297 61 aa10.47□□□□□ -0.73
COL13A1-213ENST00000520267 LCE3AQ5TA76 89 aa10.42□□□□□ -0.74
COL13A1-213ENST00000520267 LCE2AQ5TA79 106 aaPredicted RBP10.39□□□□□ -0.75
COL13A1-213ENST00000520267 LUZP6Q538Z0 58 aa10.33□□□□□ -0.76
COL13A1-213ENST00000520267 A0A0A0MQY5 61 aa10.27□□□□□ -0.76
COL13A1-213ENST00000520267 LCE2BO14633 110 aa10.24□□□□□ -0.77
COL13A1-213ENST00000520267 KRTAP10-7P60409 375 aaPredicted RBP10.15□□□□□ -0.78
COL13A1-213ENST00000520267 KRTAP8-1Q8IUC2 63 aa10.14□□□□□ -0.79
COL13A1-213ENST00000520267 KRTAP10-12P60413 245 aa10.13□□□□□ -0.79
COL13A1-213ENST00000520267 PRO2289Q9P1D8 64 aa10.1□□□□□ -0.79
COL13A1-213ENST00000520267 SPRR5A0A1B0GTR4 108 aa10.08□□□□□ -0.8
COL13A1-213ENST00000520267 USH2AO75445 5202 aa9.96□□□□□ -0.82
COL13A1-213ENST00000520267 KRTAP12-3P60328 96 aa9.92□□□□□ -0.82
COL13A1-213ENST00000520267 KRTAP19-5Q3LI72 72 aa9.66□□□□□ -0.86
COL13A1-213ENST00000520267 KMT2DO14686 5537 aa9.63□□□□□ -0.87
COL13A1-213ENST00000520267 KRTAP4-8A0A0G2JLE6 195 aa9.61□□□□□ -0.87
COL13A1-213ENST00000520267 KRTAP4-8Q9BYQ9 185 aa9.61□□□□□ -0.87
COL13A1-213ENST00000520267 SSPOA2VEC9 5147 aa9.46□□□□□ -0.89
COL13A1-213ENST00000520267 KRTAP19-7Q3SYF9 63 aa9.34□□□□□ -0.91
COL13A1-213ENST00000520267 LCE3CQ5T5A8 94 aa9.33□□□□□ -0.92
COL13A1-213ENST00000520267 KRTAP19-6Q3LI70 58 aa9.3□□□□□ -0.92
COL13A1-213ENST00000520267 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
COL13A1-213ENST00000520267 FSIP2Q5CZC0 6907 aa9.21□□□□□ -0.94
COL13A1-213ENST00000520267 INE1O15225 51 aa9.12□□□□□ -0.95
COL13A1-213ENST00000520267 MT1EP04732 61 aa9.09□□□□□ -0.95
COL13A1-213ENST00000520267 MT1LQ93083 61 aa9.03□□□□□ -0.96
COL13A1-213ENST00000520267 KRTAP4-7Q9BYR0 210 aa9.03□□□□□ -0.96
COL13A1-213ENST00000520267 KRTAP9-6A8MVA2 160 aa8.98□□□□□ -0.97
COL13A1-213ENST00000520267 KRTAP19-4Q3LI73 84 aa8.91□□□□□ -0.98
COL13A1-213ENST00000520267 FCGBPQ9Y6R7 5405 aaPredicted RBP8.86□□□□□ -0.99
COL13A1-213ENST00000520267 KRTAP9-2Q9BYQ4 174 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms