RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 SEC61GP60059 68 aa13.62□□□□□ -0.23
COL13A1-212ENST00000520133 PCLOQ9Y6V0 5065 aa13.61□□□□□ -0.23
COL13A1-212ENST00000520133 H1FX-AS1Q4G0G2 97 aa13.6□□□□□ -0.23
COL13A1-212ENST00000520133 PRO0628Q9UI54 55 aa13.59□□□□□ -0.23
COL13A1-212ENST00000520133 S4R3F8 94 aa13.57□□□□□ -0.24
COL13A1-212ENST00000520133 LCA10Q71F78 164 aa13.55□□□□□ -0.24
COL13A1-212ENST00000520133 KRTAP3-3Q9BYR6 98 aa13.48□□□□□ -0.25
COL13A1-212ENST00000520133 MUC17Q685J3 4493 aa13.44□□□□□ -0.26
COL13A1-212ENST00000520133 CDC42SE1Q9NRR8 79 aa13.44□□□□□ -0.26
COL13A1-212ENST00000520133 HERC1Q15751 4861 aa13.43□□□□□ -0.26
COL13A1-212ENST00000520133 UQCR11O14957 56 aa13.41□□□□□ -0.26
COL13A1-212ENST00000520133 KRTAP4-1Q9BYQ7 146 aa13.4□□□□□ -0.26
COL13A1-212ENST00000520133 A8MU10 97 aa13.35□□□□□ -0.27
COL13A1-212ENST00000520133 HMCN2Q8NDA2 5059 aa13.34□□□□□ -0.27
COL13A1-212ENST00000520133 MIR22HGQ0VDD5 57 aa13.27□□□□□ -0.29
COL13A1-212ENST00000520133 SPATA8Q6RVD6 105 aa13.26□□□□□ -0.29
COL13A1-212ENST00000520133 CSAG1Q6PB30 78 aa13.25□□□□□ -0.29
COL13A1-212ENST00000520133 A0A1B0GU33 70 aa13.23□□□□□ -0.29
COL13A1-212ENST00000520133 SVIPQ8NHG7 77 aa13.15□□□□□ -0.3
COL13A1-212ENST00000520133 KRTAP10-6P60371 365 aaPredicted RBP13.11□□□□□ -0.31
COL13A1-212ENST00000520133 KRTAP19-2Q3LHN2 52 aa13.09□□□□□ -0.31
COL13A1-212ENST00000520133 KRTAP3-2Q9BYR7 98 aa13.09□□□□□ -0.31
COL13A1-212ENST00000520133 H0YAA0 97 aa13.04□□□□□ -0.32
COL13A1-212ENST00000520133 ADM2Q7Z4H4 148 aa13.02□□□□□ -0.33
COL13A1-212ENST00000520133 PMAIP1Q13794 54 aa13□□□□□ -0.33
COL13A1-212ENST00000520133 P0C880 135 aa12.97□□□□□ -0.33
COL13A1-212ENST00000520133 MUC2Q02817 5179 aa12.96□□□□□ -0.33
COL13A1-212ENST00000520133 A6NN06 94 aa12.83□□□□□ -0.35
COL13A1-212ENST00000520133 FLGP20930 4061 aaPredicted RBP12.82□□□□□ -0.36
COL13A1-212ENST00000520133 KRTAP13-4Q3LI77 160 aa12.79□□□□□ -0.36
COL13A1-212ENST00000520133 M0QZ58 72 aa12.71□□□□□ -0.38
COL13A1-212ENST00000520133 UBR4Q5T4S7 5183 aa12.66□□□□□ -0.38
COL13A1-212ENST00000520133 K7ERS5 55 aa12.65□□□□□ -0.38
COL13A1-212ENST00000520133 LCE2CQ5TA81 110 aa12.65□□□□□ -0.38
COL13A1-212ENST00000520133 RNF213Q63HN8 5207 aa12.65□□□□□ -0.38
COL13A1-212ENST00000520133 A0A0D9SG42 100 aa12.64□□□□□ -0.39
COL13A1-212ENST00000520133 R4GN34 69 aa12.55□□□□□ -0.4
COL13A1-212ENST00000520133 KTN1-AS1Q86SY8 53 aa12.54□□□□□ -0.4
COL13A1-212ENST00000520133 FAT4Q6V0I7 4981 aa12.45□□□□□ -0.42
COL13A1-212ENST00000520133 LORP23490 312 aaPredicted RBP12.43□□□□□ -0.42
COL13A1-212ENST00000520133 MT1HP80294 61 aa12.41□□□□□ -0.42
COL13A1-212ENST00000520133 M0R2T5 61 aa12.39□□□□□ -0.43
COL13A1-212ENST00000520133 LINC01554Q52M75 96 aa12.34□□□□□ -0.43
COL13A1-212ENST00000520133 KRTAP12-1P59990 96 aa12.34□□□□□ -0.43
COL13A1-212ENST00000520133 SPINT4Q6UDR6 99 aa12.34□□□□□ -0.43
COL13A1-212ENST00000520133 KRTAP12-2P59991 146 aa12.33□□□□□ -0.44
COL13A1-212ENST00000520133 CRIPTQ9P021 101 aa12.31□□□□□ -0.44
COL13A1-212ENST00000520133 ROMO1P60602 79 aa12.14□□□□□ -0.47
COL13A1-212ENST00000520133 PRAC1Q96KF2 57 aa12.11□□□□□ -0.47
COL13A1-212ENST00000520133 MT2AP02795 61 aa11.99□□□□□ -0.49
COL13A1-212ENST00000520133 KRTAP9-8Q9BYQ0 159 aa11.98□□□□□ -0.49
COL13A1-212ENST00000520133 KRTAP10-10P60014 251 aa11.95□□□□□ -0.5
COL13A1-212ENST00000520133 SPRR2GQ9BYE4 73 aa11.93□□□□□ -0.5
COL13A1-212ENST00000520133 MT1FP04733 61 aa11.93□□□□□ -0.5
COL13A1-212ENST00000520133 KRTAP19-1Q8IUB9 90 aa11.84□□□□□ -0.51
COL13A1-212ENST00000520133 CAMK2N1Q7Z7J9 78 aa11.81□□□□□ -0.52
COL13A1-212ENST00000520133 KRTAP25-1Q3LHN0 102 aa11.76□□□□□ -0.53
COL13A1-212ENST00000520133 PLAC4Q8WY50 150 aa11.67□□□□□ -0.54
COL13A1-212ENST00000520133 LCE2AQ5TA79 106 aaPredicted RBP11.66□□□□□ -0.54
COL13A1-212ENST00000520133 C10orf95Q9H7T3 257 aa11.66□□□□□ -0.54
COL13A1-212ENST00000520133 KRTAP19-8Q3LI54 63 aa11.56□□□□□ -0.56
COL13A1-212ENST00000520133 KRTAP9-3Q9BYQ3 159 aa11.53□□□□□ -0.56
COL13A1-212ENST00000520133 MT1BP07438 61 aa11.36□□□□□ -0.59
COL13A1-212ENST00000520133 TNP1P09430 55 aa11.29□□□□□ -0.6
COL13A1-212ENST00000520133 LCE2BO14633 110 aa11.16□□□□□ -0.62
COL13A1-212ENST00000520133 PP632Q6XCG6 107 aa11.14□□□□□ -0.63
COL13A1-212ENST00000520133 MT1XP80297 61 aa11.07□□□□□ -0.64
COL13A1-212ENST00000520133 KRTAP10-5P60370 271 aa11.07□□□□□ -0.64
COL13A1-212ENST00000520133 KRTAP23-1A1A580 65 aa11.02□□□□□ -0.64
COL13A1-212ENST00000520133 PRO2289Q9P1D8 64 aa10.99□□□□□ -0.65
COL13A1-212ENST00000520133 USH2AO75445 5202 aa10.78□□□□□ -0.68
COL13A1-212ENST00000520133 LCE3AQ5TA76 89 aa10.7□□□□□ -0.7
COL13A1-212ENST00000520133 KRTAP10-7P60409 375 aaPredicted RBP10.65□□□□□ -0.7
COL13A1-212ENST00000520133 KRTAP10-12P60413 245 aa10.65□□□□□ -0.7
COL13A1-212ENST00000520133 KRTAP8-1Q8IUC2 63 aa10.51□□□□□ -0.73
COL13A1-212ENST00000520133 KRTAP15-1Q3LI76 137 aa10.47□□□□□ -0.73
COL13A1-212ENST00000520133 LCE2DQ5TA82 110 aaPredicted RBP10.47□□□□□ -0.73
COL13A1-212ENST00000520133 SSPOA2VEC9 5147 aa10.43□□□□□ -0.74
COL13A1-212ENST00000520133 KRTAP19-6Q3LI70 58 aa10.4□□□□□ -0.74
COL13A1-212ENST00000520133 KRTAP12-3P60328 96 aa10.28□□□□□ -0.76
COL13A1-212ENST00000520133 FSIP2Q5CZC0 6907 aa10.21□□□□□ -0.77
COL13A1-212ENST00000520133 KRTAP4-8A0A0G2JLE6 195 aa10.15□□□□□ -0.78
COL13A1-212ENST00000520133 KRTAP4-8Q9BYQ9 185 aa10.15□□□□□ -0.78
COL13A1-212ENST00000520133 KMT2DO14686 5537 aa10.1□□□□□ -0.79
COL13A1-212ENST00000520133 KRTAP19-5Q3LI72 72 aa10.1□□□□□ -0.79
COL13A1-212ENST00000520133 SPRR5A0A1B0GTR4 108 aa9.96□□□□□ -0.82
COL13A1-212ENST00000520133 KRTAP9-2Q9BYQ4 174 aa9.88□□□□□ -0.83
COL13A1-212ENST00000520133 FCGBPQ9Y6R7 5405 aaPredicted RBP9.87□□□□□ -0.83
COL13A1-212ENST00000520133 KRTAP19-7Q3SYF9 63 aa9.87□□□□□ -0.83
COL13A1-212ENST00000520133 LUZP6Q538Z0 58 aa9.87□□□□□ -0.83
COL13A1-212ENST00000520133 NDUFAF8A1L188 74 aa9.83□□□□□ -0.84
COL13A1-212ENST00000520133 MT1EP04732 61 aa9.68□□□□□ -0.86
COL13A1-212ENST00000520133 LCE3CQ5T5A8 94 aa9.63□□□□□ -0.87
COL13A1-212ENST00000520133 KRTAP19-4Q3LI73 84 aa9.6□□□□□ -0.87
COL13A1-212ENST00000520133 CRCT1Q9UGL9 99 aa9.6□□□□□ -0.87
COL13A1-212ENST00000520133 MT1LQ93083 61 aa9.54□□□□□ -0.88
COL13A1-212ENST00000520133 MACF1Q9UPN3 7388 aaKnown RBP9.41□□□□□ -0.9
COL13A1-212ENST00000520133 SPRR2FQ96RM1 72 aa9.31□□□□□ -0.92
COL13A1-212ENST00000520133 KRTAP4-7Q9BYR0 210 aa9.28□□□□□ -0.92
COL13A1-212ENST00000520133 KRTAP19-3Q7Z4W3 81 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 736.8 ms