RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 LOC101927531A0A1B0GV80 90 aa5.78□□□□□ -1.48
HPS4-218ENST00000519774 CYP4F30PQ9H0H9 118 aa5.77□□□□□ -1.49
HPS4-218ENST00000519774 ATOX1O00244 68 aa5.76□□□□□ -1.49
HPS4-218ENST00000519774 MT-ATP8P03928 68 aa5.76□□□□□ -1.49
HPS4-218ENST00000519774 OCR1Q9BZK8 76 aa5.75□□□□□ -1.49
HPS4-218ENST00000519774 SCGB1A1P11684 91 aa5.74□□□□□ -1.49
HPS4-218ENST00000519774 C1orf64Q8NEQ6 169 aa5.74□□□□□ -1.49
HPS4-218ENST00000519774 KRTAP9-8Q9BYQ0 159 aa5.74□□□□□ -1.49
HPS4-218ENST00000519774 LINC00208Q96KT6 92 aa5.72□□□□□ -1.49
HPS4-218ENST00000519774 IMUPQ9GZP8 106 aa5.72□□□□□ -1.49
HPS4-218ENST00000519774 MT2AP02795 61 aa5.71□□□□□ -1.5
HPS4-218ENST00000519774 MP68P56378 58 aa5.71□□□□□ -1.5
HPS4-218ENST00000519774 FAM236AA0A1B0GUQ0 79 aa5.67□□□□□ -1.5
HPS4-218ENST00000519774 FAM236BA0A1B0GV22 79 aa5.67□□□□□ -1.5
HPS4-218ENST00000519774 MT1FP04733 61 aa5.67□□□□□ -1.5
HPS4-218ENST00000519774 C5orf47Q569G3 176 aa5.67□□□□□ -1.5
HPS4-218ENST00000519774 S4R3F8 94 aa5.67□□□□□ -1.5
HPS4-218ENST00000519774 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
HPS4-218ENST00000519774 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
HPS4-218ENST00000519774 KLKP1Q107X0 134 aa5.64□□□□□ -1.51
HPS4-218ENST00000519774 H3BPC8 53 aa5.63□□□□□ -1.51
HPS4-218ENST00000519774 LCA10Q71F78 164 aa5.62□□□□□ -1.51
HPS4-218ENST00000519774 SMIM20Q8N5G0 67 aa5.6□□□□□ -1.51
HPS4-218ENST00000519774 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
HPS4-218ENST00000519774 CSAG1Q6PB30 78 aa5.58□□□□□ -1.52
HPS4-218ENST00000519774 A8MUN3 132 aa5.56□□□□□ -1.52
HPS4-218ENST00000519774 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
HPS4-218ENST00000519774 NDUFC1O43677 76 aa5.5□□□□□ -1.53
HPS4-218ENST00000519774 FSIP2Q5CZC0 6907 aa5.49□□□□□ -1.53
HPS4-218ENST00000519774 SNURFQ9Y675 71 aa5.49□□□□□ -1.53
HPS4-218ENST00000519774 SERP2Q8N6R1 65 aa5.48□□□□□ -1.53
HPS4-218ENST00000519774 DMAC1Q96GE9 116 aa5.48□□□□□ -1.53
HPS4-218ENST00000519774 C20orf197Q8N268 126 aa5.46□□□□□ -1.54
HPS4-218ENST00000519774 ACYP2P14621 99 aa5.39□□□□□ -1.55
HPS4-218ENST00000519774 USH2AO75445 5202 aa5.38□□□□□ -1.55
HPS4-218ENST00000519774 COX7CP15954 63 aa5.37□□□□□ -1.55
HPS4-218ENST00000519774 H0YAA0 97 aa5.36□□□□□ -1.55
HPS4-218ENST00000519774 ADM2Q7Z4H4 148 aa5.35□□□□□ -1.55
HPS4-218ENST00000519774 SPANXA2-OT1Q8N9U9 137 aa5.34□□□□□ -1.55
HPS4-218ENST00000519774 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
HPS4-218ENST00000519774 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
HPS4-218ENST00000519774 ANAPC13Q9BS18 74 aa5.31□□□□□ -1.56
HPS4-218ENST00000519774 CRIPTQ9P021 101 aa5.31□□□□□ -1.56
HPS4-218ENST00000519774 SPTSSBQ8NFR3 76 aa5.29□□□□□ -1.56
HPS4-218ENST00000519774 SSPOA2VEC9 5147 aa5.27□□□□□ -1.57
HPS4-218ENST00000519774 Q5VV11 94 aa5.27□□□□□ -1.57
HPS4-218ENST00000519774 CYSTM1Q9H1C7 97 aa5.27□□□□□ -1.57
HPS4-218ENST00000519774 P0C880 135 aa5.26□□□□□ -1.57
HPS4-218ENST00000519774 KRTAP19-8Q3LI54 63 aa5.26□□□□□ -1.57
HPS4-218ENST00000519774 KRTAP19-6Q3LI70 58 aa5.26□□□□□ -1.57
HPS4-218ENST00000519774 MT1BP07438 61 aa5.25□□□□□ -1.57
HPS4-218ENST00000519774 H7BZZ5 65 aa5.24□□□□□ -1.57
HPS4-218ENST00000519774 COA5Q86WW8 74 aa5.22□□□□□ -1.57
HPS4-218ENST00000519774 CCDC179H3BU77 68 aa5.2□□□□□ -1.58
HPS4-218ENST00000519774 R4GN34 69 aa5.2□□□□□ -1.58
HPS4-218ENST00000519774 M0QZ58 72 aa5.19□□□□□ -1.58
HPS4-218ENST00000519774 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
HPS4-218ENST00000519774 A6NN06 94 aa5.12□□□□□ -1.59
HPS4-218ENST00000519774 LINC01554Q52M75 96 aa5.12□□□□□ -1.59
HPS4-218ENST00000519774 PCP4P48539 62 aa5.08□□□□□ -1.6
HPS4-218ENST00000519774 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
HPS4-218ENST00000519774 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
HPS4-218ENST00000519774 ATP5EP56381 51 aaPredicted RBP5.05□□□□□ -1.6
HPS4-218ENST00000519774 SEC61GP60059 68 aa5.04□□□□□ -1.6
HPS4-218ENST00000519774 SERP1Q9Y6X1 66 aa5.03□□□□□ -1.6
HPS4-218ENST00000519774 TMEM258P61165 79 aa5□□□□□ -1.61
HPS4-218ENST00000519774 KRTAP13-4Q3LI77 160 aa4.99□□□□□ -1.61
HPS4-218ENST00000519774 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
HPS4-218ENST00000519774 MT1XP80297 61 aa4.97□□□□□ -1.61
HPS4-218ENST00000519774 A0A1B0GU69 56 aa4.94□□□□□ -1.62
HPS4-218ENST00000519774 A0A1B0GU33 70 aa4.93□□□□□ -1.62
HPS4-218ENST00000519774 A0A0A0MQY5 61 aa4.92□□□□□ -1.62
HPS4-218ENST00000519774 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
HPS4-218ENST00000519774 MACF1Q9UPN3 7388 aaKnown RBP4.92□□□□□ -1.62
HPS4-218ENST00000519774 SPATA8Q6RVD6 105 aa4.91□□□□□ -1.62
HPS4-218ENST00000519774 A0A0D9SG42 100 aa4.9□□□□□ -1.63
HPS4-218ENST00000519774 KRTAP6-3Q3LI67 103 aa4.86□□□□□ -1.63
HPS4-218ENST00000519774 PRR15LQ9BU68 103 aa4.86□□□□□ -1.63
HPS4-218ENST00000519774 LINC01558Q9Y6Z2 57 aa4.84□□□□□ -1.63
HPS4-218ENST00000519774 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
HPS4-218ENST00000519774 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
HPS4-218ENST00000519774 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
HPS4-218ENST00000519774 SPINT4Q6UDR6 99 aa4.81□□□□□ -1.64
HPS4-218ENST00000519774 SMIM26A0A096LP01 95 aa4.79□□□□□ -1.64
HPS4-218ENST00000519774 KRTAP12-2P59991 146 aa4.79□□□□□ -1.64
HPS4-218ENST00000519774 A8MU10 97 aa4.77□□□□□ -1.65
HPS4-218ENST00000519774 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
HPS4-218ENST00000519774 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
HPS4-218ENST00000519774 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
HPS4-218ENST00000519774 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
HPS4-218ENST00000519774 KRTAP10-12P60413 245 aa4.71□□□□□ -1.66
HPS4-218ENST00000519774 UQCR11O14957 56 aa4.69□□□□□ -1.66
HPS4-218ENST00000519774 V9GYY9 64 aa4.68□□□□□ -1.66
HPS4-218ENST00000519774 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
HPS4-218ENST00000519774 PSPHP1O15172 72 aa4.66□□□□□ -1.66
HPS4-218ENST00000519774 Q1T7F1 81 aa4.65□□□□□ -1.67
HPS4-218ENST00000519774 KMT2DO14686 5537 aa4.65□□□□□ -1.67
HPS4-218ENST00000519774 MIR22HGQ0VDD5 57 aa4.61□□□□□ -1.67
HPS4-218ENST00000519774 NEBP20929 6669 aa4.6□□□□□ -1.67
HPS4-218ENST00000519774 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms