RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 RYR3Q15413 4870 aa4.52□□□□□ -1.69
CTNNA1-210ENST00000518825 KRTAP21-3Q3LHN1 58 aa4.51□□□□□ -1.69
CTNNA1-210ENST00000518825 H0YAA0 97 aa4.47□□□□□ -1.69
CTNNA1-210ENST00000518825 CRIPTQ9P021 101 aa4.46□□□□□ -1.7
CTNNA1-210ENST00000518825 LPAP08519 4548 aa4.45□□□□□ -1.7
CTNNA1-210ENST00000518825 RYR1P21817 5038 aa4.45□□□□□ -1.7
CTNNA1-210ENST00000518825 KRTAP17-1Q9BYP8 105 aa4.45□□□□□ -1.7
CTNNA1-210ENST00000518825 ROMO1P60602 79 aa4.44□□□□□ -1.7
CTNNA1-210ENST00000518825 KRTAP10-8P60410 259 aa4.41□□□□□ -1.7
CTNNA1-210ENST00000518825 COX6B2Q6YFQ2 88 aa4.4□□□□□ -1.71
CTNNA1-210ENST00000518825 KIAA1109Q2LD37 5005 aa4.4□□□□□ -1.71
CTNNA1-210ENST00000518825 A0A1B0GU33 70 aa4.38□□□□□ -1.71
CTNNA1-210ENST00000518825 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
CTNNA1-210ENST00000518825 DMBT1Q9UGM3 2413 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-210ENST00000518825 SPINT4Q6UDR6 99 aa4.35□□□□□ -1.71
CTNNA1-210ENST00000518825 LRP2P98164 4655 aa4.35□□□□□ -1.71
CTNNA1-210ENST00000518825 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
CTNNA1-210ENST00000518825 Q5VSD8 79 aa4.34□□□□□ -1.71
CTNNA1-210ENST00000518825 EPPK1P58107 5090 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-210ENST00000518825 XP32Q5T750 250 aa4.34□□□□□ -1.72
CTNNA1-210ENST00000518825 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-210ENST00000518825 RPL37P61927 97 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-210ENST00000518825 ABCA13Q86UQ4 5058 aa4.33□□□□□ -1.72
CTNNA1-210ENST00000518825 SEC61BP60468 96 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-210ENST00000518825 P0C880 135 aa4.32□□□□□ -1.72
CTNNA1-210ENST00000518825 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
CTNNA1-210ENST00000518825 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
CTNNA1-210ENST00000518825 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
CTNNA1-210ENST00000518825 LCE2CQ5TA81 110 aa4.24□□□□□ -1.73
CTNNA1-210ENST00000518825 S4R3F8 94 aa4.23□□□□□ -1.73
CTNNA1-210ENST00000518825 LCE2BO14633 110 aa4.2□□□□□ -1.74
CTNNA1-210ENST00000518825 A0A0D9SG42 100 aa4.19□□□□□ -1.74
CTNNA1-210ENST00000518825 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
CTNNA1-210ENST00000518825 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
CTNNA1-210ENST00000518825 K7ERS5 55 aa4.14□□□□□ -1.75
CTNNA1-210ENST00000518825 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
CTNNA1-210ENST00000518825 KRTAP4-5Q9BYR2 181 aa4.14□□□□□ -1.75
CTNNA1-210ENST00000518825 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
CTNNA1-210ENST00000518825 LCE2AQ5TA79 106 aaPredicted RBP4.12□□□□□ -1.75
CTNNA1-210ENST00000518825 KRTAP12-1P59990 96 aa4.09□□□□□ -1.75
CTNNA1-210ENST00000518825 MUC2Q02817 5179 aa4.08□□□□□ -1.76
CTNNA1-210ENST00000518825 C10orf95Q9H7T3 257 aa4.07□□□□□ -1.76
CTNNA1-210ENST00000518825 HERC2O95714 4834 aa4.05□□□□□ -1.76
CTNNA1-210ENST00000518825 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
CTNNA1-210ENST00000518825 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
CTNNA1-210ENST00000518825 M0QZ58 72 aa4□□□□□ -1.77
CTNNA1-210ENST00000518825 LORP23490 312 aaPredicted RBP4□□□□□ -1.77
CTNNA1-210ENST00000518825 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
CTNNA1-210ENST00000518825 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
CTNNA1-210ENST00000518825 FLGP20930 4061 aaPredicted RBP3.93□□□□□ -1.78
CTNNA1-210ENST00000518825 PCLOQ9Y6V0 5065 aa3.93□□□□□ -1.78
CTNNA1-210ENST00000518825 HERC1Q15751 4861 aa3.92□□□□□ -1.78
CTNNA1-210ENST00000518825 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
CTNNA1-210ENST00000518825 R4GN34 69 aa3.91□□□□□ -1.78
CTNNA1-210ENST00000518825 FAT4Q6V0I7 4981 aa3.87□□□□□ -1.79
CTNNA1-210ENST00000518825 HMCN2Q8NDA2 5059 aa3.86□□□□□ -1.79
CTNNA1-210ENST00000518825 RNF213Q63HN8 5207 aa3.74□□□□□ -1.81
CTNNA1-210ENST00000518825 UBR4Q5T4S7 5183 aa3.73□□□□□ -1.81
CTNNA1-210ENST00000518825 PLAC4Q8WY50 150 aa3.69□□□□□ -1.82
CTNNA1-210ENST00000518825 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
CTNNA1-210ENST00000518825 KRTAP19-1Q8IUB9 90 aa3.63□□□□□ -1.83
CTNNA1-210ENST00000518825 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
CTNNA1-210ENST00000518825 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
CTNNA1-210ENST00000518825 MT1HP80294 61 aa3.59□□□□□ -1.84
CTNNA1-210ENST00000518825 TNP1P09430 55 aa3.56□□□□□ -1.84
CTNNA1-210ENST00000518825 MT1FP04733 61 aa3.55□□□□□ -1.84
CTNNA1-210ENST00000518825 MT2AP02795 61 aa3.53□□□□□ -1.84
CTNNA1-210ENST00000518825 KRTAP9-8Q9BYQ0 159 aa3.53□□□□□ -1.84
CTNNA1-210ENST00000518825 M0R2T5 61 aa3.5□□□□□ -1.85
CTNNA1-210ENST00000518825 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
CTNNA1-210ENST00000518825 KRTAP10-10P60014 251 aa3.47□□□□□ -1.85
CTNNA1-210ENST00000518825 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
CTNNA1-210ENST00000518825 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
CTNNA1-210ENST00000518825 MT1BP07438 61 aa3.43□□□□□ -1.86
CTNNA1-210ENST00000518825 KRTAP10-5P60370 271 aa3.42□□□□□ -1.86
CTNNA1-210ENST00000518825 PRO2289Q9P1D8 64 aa3.42□□□□□ -1.86
CTNNA1-210ENST00000518825 MT1XP80297 61 aa3.41□□□□□ -1.86
CTNNA1-210ENST00000518825 KRTAP9-3Q9BYQ3 159 aa3.37□□□□□ -1.87
CTNNA1-210ENST00000518825 USH2AO75445 5202 aa3.36□□□□□ -1.87
CTNNA1-210ENST00000518825 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
CTNNA1-210ENST00000518825 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
CTNNA1-210ENST00000518825 KMT2DO14686 5537 aa3.3□□□□□ -1.88
CTNNA1-210ENST00000518825 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
CTNNA1-210ENST00000518825 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
CTNNA1-210ENST00000518825 INE1O15225 51 aa3.19□□□□□ -1.9
CTNNA1-210ENST00000518825 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
CTNNA1-210ENST00000518825 KRTAP4-8A0A0G2JLE6 195 aa3.14□□□□□ -1.91
CTNNA1-210ENST00000518825 KRTAP4-8Q9BYQ9 185 aa3.14□□□□□ -1.91
CTNNA1-210ENST00000518825 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
CTNNA1-210ENST00000518825 SSPOA2VEC9 5147 aa3.06□□□□□ -1.92
CTNNA1-210ENST00000518825 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
CTNNA1-210ENST00000518825 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
CTNNA1-210ENST00000518825 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
CTNNA1-210ENST00000518825 LCE4AQ5TA78 99 aa2.98□□□□□ -1.93
CTNNA1-210ENST00000518825 FSIP2Q5CZC0 6907 aa2.98□□□□□ -1.93
CTNNA1-210ENST00000518825 MT1EP04732 61 aa2.94□□□□□ -1.94
CTNNA1-210ENST00000518825 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
CTNNA1-210ENST00000518825 MT1LQ93083 61 aa2.93□□□□□ -1.94
CTNNA1-210ENST00000518825 FCGBPQ9Y6R7 5405 aaPredicted RBP2.9□□□□□ -1.94
CTNNA1-210ENST00000518825 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms