RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 PRAC1Q96KF2 57 aa9.97□□□□□ -0.81
SDC2-202ENST00000518385 ABCA13Q86UQ4 5058 aa9.95□□□□□ -0.82
SDC2-202ENST00000518385 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
SDC2-202ENST00000518385 A8MUU9 505 aa9.92□□□□□ -0.82
SDC2-202ENST00000518385 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
SDC2-202ENST00000518385 ADM2Q7Z4H4 148 aa9.88□□□□□ -0.83
SDC2-202ENST00000518385 C9orf92A6NGG3 77 aa9.85□□□□□ -0.83
SDC2-202ENST00000518385 J3QL48 77 aa9.8□□□□□ -0.84
SDC2-202ENST00000518385 CSAG1Q6PB30 78 aa9.78□□□□□ -0.84
SDC2-202ENST00000518385 A0A1B0GU33 70 aa9.77□□□□□ -0.85
SDC2-202ENST00000518385 H1FX-AS1Q4G0G2 97 aa9.75□□□□□ -0.85
SDC2-202ENST00000518385 H0YAA0 97 aa9.74□□□□□ -0.85
SDC2-202ENST00000518385 K7ERS5 55 aa9.71□□□□□ -0.85
SDC2-202ENST00000518385 COX6B2Q6YFQ2 88 aa9.65□□□□□ -0.86
SDC2-202ENST00000518385 PCLOQ9Y6V0 5065 aa9.65□□□□□ -0.86
SDC2-202ENST00000518385 KRTAP25-1Q3LHN0 102 aa9.64□□□□□ -0.87
SDC2-202ENST00000518385 KRTAP3-1Q9BYR8 98 aa9.64□□□□□ -0.87
SDC2-202ENST00000518385 RPL37P61927 97 aaKnown RBP9.63□□□□□ -0.87
SDC2-202ENST00000518385 XP32Q5T750 250 aa9.58□□□□□ -0.88
SDC2-202ENST00000518385 TPRXLQ17RH7 258 aa9.57□□□□□ -0.88
SDC2-202ENST00000518385 ROMO1P60602 79 aa9.41□□□□□ -0.9
SDC2-202ENST00000518385 LPAP08519 4548 aa9.37□□□□□ -0.91
SDC2-202ENST00000518385 HERC1Q15751 4861 aa9.37□□□□□ -0.91
SDC2-202ENST00000518385 LRP2P98164 4655 aa9.31□□□□□ -0.92
SDC2-202ENST00000518385 KRTAP10-6P60371 365 aaPredicted RBP9.29□□□□□ -0.92
SDC2-202ENST00000518385 H3BS24 57 aa9.28□□□□□ -0.92
SDC2-202ENST00000518385 HMCN2Q8NDA2 5059 aa9.27□□□□□ -0.93
SDC2-202ENST00000518385 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
SDC2-202ENST00000518385 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
SDC2-202ENST00000518385 S4R3F8 94 aa9.25□□□□□ -0.93
SDC2-202ENST00000518385 SEC61BP60468 96 aaKnown RBP9.24□□□□□ -0.93
SDC2-202ENST00000518385 MUC17Q685J3 4493 aa9.12□□□□□ -0.95
SDC2-202ENST00000518385 KRTAP13-4Q3LI77 160 aa9.1□□□□□ -0.95
SDC2-202ENST00000518385 KRTAP4-1Q9BYQ7 146 aa9.06□□□□□ -0.96
SDC2-202ENST00000518385 CRIPTQ9P021 101 aa9.03□□□□□ -0.96
SDC2-202ENST00000518385 A0A0D9SG42 100 aa9.03□□□□□ -0.96
SDC2-202ENST00000518385 M0QZ58 72 aa9.03□□□□□ -0.96
SDC2-202ENST00000518385 P0C880 135 aa8.96□□□□□ -0.97
SDC2-202ENST00000518385 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
SDC2-202ENST00000518385 KRTAP12-1P59990 96 aa8.9□□□□□ -0.99
SDC2-202ENST00000518385 KRTAP12-2P59991 146 aa8.87□□□□□ -0.99
SDC2-202ENST00000518385 UBR4Q5T4S7 5183 aa8.83□□□□□ -1
SDC2-202ENST00000518385 KRTAP19-2Q3LHN2 52 aa8.81□□□□□ -1
SDC2-202ENST00000518385 KRTAP15-1Q3LI76 137 aa8.81□□□□□ -1
SDC2-202ENST00000518385 MUC2Q02817 5179 aa8.8□□□□□ -1
SDC2-202ENST00000518385 RNF213Q63HN8 5207 aa8.78□□□□□ -1
SDC2-202ENST00000518385 C10orf95Q9H7T3 257 aa8.75□□□□□ -1.01
SDC2-202ENST00000518385 LCE2CQ5TA81 110 aa8.65□□□□□ -1.03
SDC2-202ENST00000518385 FLGP20930 4061 aaPredicted RBP8.59□□□□□ -1.03
SDC2-202ENST00000518385 R4GN34 69 aa8.56□□□□□ -1.04
SDC2-202ENST00000518385 NDUFAF8A1L188 74 aa8.54□□□□□ -1.04
SDC2-202ENST00000518385 FAT4Q6V0I7 4981 aa8.49□□□□□ -1.05
SDC2-202ENST00000518385 MT1HP80294 61 aa8.46□□□□□ -1.06
SDC2-202ENST00000518385 PP632Q6XCG6 107 aa8.45□□□□□ -1.06
SDC2-202ENST00000518385 M0R2T5 61 aa8.35□□□□□ -1.07
SDC2-202ENST00000518385 PLAC4Q8WY50 150 aa8.34□□□□□ -1.07
SDC2-202ENST00000518385 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
SDC2-202ENST00000518385 LCE2AQ5TA79 106 aaPredicted RBP8.22□□□□□ -1.09
SDC2-202ENST00000518385 KRTAP23-1A1A580 65 aa8.21□□□□□ -1.1
SDC2-202ENST00000518385 KRTAP9-8Q9BYQ0 159 aa8.15□□□□□ -1.1
SDC2-202ENST00000518385 CAMK2N1Q7Z7J9 78 aa8.14□□□□□ -1.11
SDC2-202ENST00000518385 LUZP6Q538Z0 58 aa8.12□□□□□ -1.11
SDC2-202ENST00000518385 MT2AP02795 61 aa8.1□□□□□ -1.11
SDC2-202ENST00000518385 LCE2BO14633 110 aa8.05□□□□□ -1.12
SDC2-202ENST00000518385 MT1FP04733 61 aa8.05□□□□□ -1.12
SDC2-202ENST00000518385 KRTAP10-10P60014 251 aa8.04□□□□□ -1.12
SDC2-202ENST00000518385 SPRR2GQ9BYE4 73 aa8.01□□□□□ -1.13
SDC2-202ENST00000518385 TNP1P09430 55 aa7.99□□□□□ -1.13
SDC2-202ENST00000518385 A0A0A0MQY5 61 aa7.93□□□□□ -1.14
SDC2-202ENST00000518385 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
SDC2-202ENST00000518385 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
SDC2-202ENST00000518385 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.14
SDC2-202ENST00000518385 KRTAP9-3Q9BYQ3 159 aa7.87□□□□□ -1.15
SDC2-202ENST00000518385 SPRR5A0A1B0GTR4 108 aa7.84□□□□□ -1.15
SDC2-202ENST00000518385 KRTAP19-8Q3LI54 63 aa7.76□□□□□ -1.17
SDC2-202ENST00000518385 MT1BP07438 61 aa7.61□□□□□ -1.19
SDC2-202ENST00000518385 USH2AO75445 5202 aa7.44□□□□□ -1.22
SDC2-202ENST00000518385 KRTAP10-5P60370 271 aa7.38□□□□□ -1.23
SDC2-202ENST00000518385 MT1XP80297 61 aa7.38□□□□□ -1.23
SDC2-202ENST00000518385 PRO2289Q9P1D8 64 aa7.37□□□□□ -1.23
SDC2-202ENST00000518385 KRTAP8-1Q8IUC2 63 aa7.36□□□□□ -1.23
SDC2-202ENST00000518385 LCE3AQ5TA76 89 aa7.33□□□□□ -1.24
SDC2-202ENST00000518385 KRTAP9-2Q9BYQ4 174 aa7.26□□□□□ -1.25
SDC2-202ENST00000518385 INE1O15225 51 aa7.25□□□□□ -1.25
SDC2-202ENST00000518385 KRTAP19-6Q3LI70 58 aa7.22□□□□□ -1.25
SDC2-202ENST00000518385 SSPOA2VEC9 5147 aa7.22□□□□□ -1.25
SDC2-202ENST00000518385 FSIP2Q5CZC0 6907 aa7.18□□□□□ -1.26
SDC2-202ENST00000518385 KRTAP10-12P60413 245 aa7.12□□□□□ -1.27
SDC2-202ENST00000518385 KRTAP4-8Q9BYQ9 185 aa7.1□□□□□ -1.27
SDC2-202ENST00000518385 KRTAP12-3P60328 96 aa7.08□□□□□ -1.28
SDC2-202ENST00000518385 KRTAP10-7P60409 375 aaPredicted RBP7.08□□□□□ -1.28
SDC2-202ENST00000518385 CRCT1Q9UGL9 99 aa6.99□□□□□ -1.29
SDC2-202ENST00000518385 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.99□□□□□ -1.29
SDC2-202ENST00000518385 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
SDC2-202ENST00000518385 KRTAP9-6A0A140TA67 174 aa6.95□□□□□ -1.3
SDC2-202ENST00000518385 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
SDC2-202ENST00000518385 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
SDC2-202ENST00000518385 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
SDC2-202ENST00000518385 KRTAP19-5Q3LI72 72 aa6.74□□□□□ -1.33
SDC2-202ENST00000518385 KMT2DO14686 5537 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms