RNA–Protein interactions for RNA: ENST00000517654.5

FAM49B-202, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49B, Length 1,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-202ENST00000517654 KRTAP3-3Q9BYR6 98 aa8.15□□□□□ -1.1
FAM49B-202ENST00000517654 LCA10Q71F78 164 aa8.14□□□□□ -1.11
FAM49B-202ENST00000517654 S4R3F8 94 aa8.11□□□□□ -1.11
FAM49B-202ENST00000517654 MT1HP80294 61 aa8.09□□□□□ -1.11
FAM49B-202ENST00000517654 SERP1Q9Y6X1 66 aa8.06□□□□□ -1.12
FAM49B-202ENST00000517654 CHKB-CPT1BH3BT56 60 aa8.03□□□□□ -1.12
FAM49B-202ENST00000517654 KRTAP3-2Q9BYR7 98 aa7.98□□□□□ -1.13
FAM49B-202ENST00000517654 RPS28P62857 69 aaKnown RBP7.94□□□□□ -1.14
FAM49B-202ENST00000517654 LCE2AQ5TA79 106 aaPredicted RBP7.94□□□□□ -1.14
FAM49B-202ENST00000517654 CSAG1Q6PB30 78 aa7.92□□□□□ -1.14
FAM49B-202ENST00000517654 M0R2T5 61 aa7.87□□□□□ -1.15
FAM49B-202ENST00000517654 SPTSSBQ8NFR3 76 aa7.85□□□□□ -1.15
FAM49B-202ENST00000517654 SMIM26A0A096LP01 95 aa7.8□□□□□ -1.16
FAM49B-202ENST00000517654 KRTAP10-6P60371 365 aaPredicted RBP7.8□□□□□ -1.16
FAM49B-202ENST00000517654 KRTAP9-8Q9BYQ0 159 aa7.78□□□□□ -1.16
FAM49B-202ENST00000517654 LORP23490 312 aaPredicted RBP7.78□□□□□ -1.16
FAM49B-202ENST00000517654 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
FAM49B-202ENST00000517654 ADM2Q7Z4H4 148 aa7.75□□□□□ -1.17
FAM49B-202ENST00000517654 P0C880 135 aa7.74□□□□□ -1.17
FAM49B-202ENST00000517654 H0YAA0 97 aa7.73□□□□□ -1.17
FAM49B-202ENST00000517654 MT2AP02795 61 aa7.73□□□□□ -1.17
FAM49B-202ENST00000517654 Q1T7F1 81 aa7.73□□□□□ -1.17
FAM49B-202ENST00000517654 MT1FP04733 61 aa7.7□□□□□ -1.18
FAM49B-202ENST00000517654 A0A1B0GU69 56 aa7.66□□□□□ -1.18
FAM49B-202ENST00000517654 PRR15LQ9BU68 103 aa7.66□□□□□ -1.18
FAM49B-202ENST00000517654 PSPHP1O15172 72 aa7.64□□□□□ -1.19
FAM49B-202ENST00000517654 V9GYY9 64 aa7.62□□□□□ -1.19
FAM49B-202ENST00000517654 Q5VV11 94 aa7.6□□□□□ -1.19
FAM49B-202ENST00000517654 SEC61GP60059 68 aa7.59□□□□□ -1.19
FAM49B-202ENST00000517654 KRTAP10-10P60014 251 aa7.58□□□□□ -1.2
FAM49B-202ENST00000517654 KRTAP13-4Q3LI77 160 aa7.56□□□□□ -1.2
FAM49B-202ENST00000517654 A0A1B0GU33 70 aa7.51□□□□□ -1.21
FAM49B-202ENST00000517654 KRTAP9-3Q9BYQ3 159 aa7.5□□□□□ -1.21
FAM49B-202ENST00000517654 KRTAP19-1Q8IUB9 90 aa7.49□□□□□ -1.21
FAM49B-202ENST00000517654 SPATA8Q6RVD6 105 aa7.48□□□□□ -1.21
FAM49B-202ENST00000517654 M0QZ58 72 aa7.45□□□□□ -1.22
FAM49B-202ENST00000517654 SPRR2GQ9BYE4 73 aa7.43□□□□□ -1.22
FAM49B-202ENST00000517654 CRIPTQ9P021 101 aa7.43□□□□□ -1.22
FAM49B-202ENST00000517654 R4GN34 69 aa7.43□□□□□ -1.22
FAM49B-202ENST00000517654 UQCR11O14957 56 aa7.38□□□□□ -1.23
FAM49B-202ENST00000517654 A8MU10 97 aa7.37□□□□□ -1.23
FAM49B-202ENST00000517654 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
FAM49B-202ENST00000517654 A6NED7 52 aa7.35□□□□□ -1.23
FAM49B-202ENST00000517654 LCE2BO14633 110 aa7.35□□□□□ -1.23
FAM49B-202ENST00000517654 LINC01554Q52M75 96 aa7.33□□□□□ -1.24
FAM49B-202ENST00000517654 FSIP2Q5CZC0 6907 aa7.32□□□□□ -1.24
FAM49B-202ENST00000517654 A0A0D9SG42 100 aa7.31□□□□□ -1.24
FAM49B-202ENST00000517654 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
FAM49B-202ENST00000517654 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
FAM49B-202ENST00000517654 MT1BP07438 61 aa7.25□□□□□ -1.25
FAM49B-202ENST00000517654 USH2AO75445 5202 aa7.23□□□□□ -1.25
FAM49B-202ENST00000517654 KRTAP12-1P59990 96 aa7.21□□□□□ -1.26
FAM49B-202ENST00000517654 CDC42SE1Q9NRR8 79 aa7.2□□□□□ -1.26
FAM49B-202ENST00000517654 KRTAP12-2P59991 146 aa7.2□□□□□ -1.26
FAM49B-202ENST00000517654 A6NN06 94 aa7.15□□□□□ -1.27
FAM49B-202ENST00000517654 BRK1Q8WUW1 75 aa7.15□□□□□ -1.27
FAM49B-202ENST00000517654 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
FAM49B-202ENST00000517654 SSPOA2VEC9 5147 aa7.09□□□□□ -1.28
FAM49B-202ENST00000517654 PLAC4Q8WY50 150 aa7.04□□□□□ -1.28
FAM49B-202ENST00000517654 CRCT1Q9UGL9 99 aa7.01□□□□□ -1.29
FAM49B-202ENST00000517654 MT1XP80297 61 aa6.96□□□□□ -1.3
FAM49B-202ENST00000517654 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
FAM49B-202ENST00000517654 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
FAM49B-202ENST00000517654 CAMK2N1Q7Z7J9 78 aa6.92□□□□□ -1.3
FAM49B-202ENST00000517654 K7ERS5 55 aa6.9□□□□□ -1.31
FAM49B-202ENST00000517654 KRTAP19-6Q3LI70 58 aa6.89□□□□□ -1.31
FAM49B-202ENST00000517654 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
FAM49B-202ENST00000517654 PRO0628Q9UI54 55 aa6.85□□□□□ -1.31
FAM49B-202ENST00000517654 FCGBPQ9Y6R7 5405 aaPredicted RBP6.82□□□□□ -1.32
FAM49B-202ENST00000517654 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
FAM49B-202ENST00000517654 PMAIP1Q13794 54 aa6.72□□□□□ -1.33
FAM49B-202ENST00000517654 ROMO1P60602 79 aa6.69□□□□□ -1.34
FAM49B-202ENST00000517654 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
FAM49B-202ENST00000517654 MACF1Q9UPN3 7388 aaKnown RBP6.62□□□□□ -1.35
FAM49B-202ENST00000517654 KRTAP10-12P60413 245 aa6.57□□□□□ -1.36
FAM49B-202ENST00000517654 TNP1P09430 55 aa6.55□□□□□ -1.36
FAM49B-202ENST00000517654 KMT2DO14686 5537 aa6.52□□□□□ -1.36
FAM49B-202ENST00000517654 SYNE2Q8WXH0 6885 aaKnown RBP6.52□□□□□ -1.37
FAM49B-202ENST00000517654 KRTAP25-1Q3LHN0 102 aa6.52□□□□□ -1.37
FAM49B-202ENST00000517654 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.51□□□□□ -1.37
FAM49B-202ENST00000517654 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
FAM49B-202ENST00000517654 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
FAM49B-202ENST00000517654 LCE3AQ5TA76 89 aa6.43□□□□□ -1.38
FAM49B-202ENST00000517654 PRAC1Q96KF2 57 aa6.43□□□□□ -1.38
FAM49B-202ENST00000517654 KTN1-AS1Q86SY8 53 aa6.39□□□□□ -1.39
FAM49B-202ENST00000517654 LOC100996750A0A140TA64 210 aa6.32□□□□□ -1.4
FAM49B-202ENST00000517654 KRTAP4-6Q9BYQ5 205 aa6.32□□□□□ -1.4
FAM49B-202ENST00000517654 KRTAP9-7A8MTY7 169 aa6.29□□□□□ -1.4
FAM49B-202ENST00000517654 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
FAM49B-202ENST00000517654 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
FAM49B-202ENST00000517654 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
FAM49B-202ENST00000517654 KRTAP19-7Q3SYF9 63 aa6.22□□□□□ -1.41
FAM49B-202ENST00000517654 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
FAM49B-202ENST00000517654 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
FAM49B-202ENST00000517654 KRTAP12-3P60328 96 aa6.13□□□□□ -1.43
FAM49B-202ENST00000517654 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
FAM49B-202ENST00000517654 MT1EP04732 61 aa6.1□□□□□ -1.43
FAM49B-202ENST00000517654 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
FAM49B-202ENST00000517654 SPRR2FQ96RM1 72 aa6.09□□□□□ -1.44
FAM49B-202ENST00000517654 SVIPQ8NHG7 77 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms