RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 COX6B2Q6YFQ2 88 aa3.52□□□□□ -1.85
CDH12-203ENST00000517378 DYNC1H1Q14204 4646 aaKnown RBP3.52□□□□□ -1.85
CDH12-203ENST00000517378 A0A1B0GU33 70 aa3.52□□□□□ -1.85
CDH12-203ENST00000517378 H1FX-AS1Q4G0G2 97 aa3.52□□□□□ -1.85
CDH12-203ENST00000517378 KIAA1109Q2LD37 5005 aa3.49□□□□□ -1.85
CDH12-203ENST00000517378 CSAG1Q6PB30 78 aa3.48□□□□□ -1.85
CDH12-203ENST00000517378 FLG2Q5D862 2391 aaPredicted RBP3.48□□□□□ -1.85
CDH12-203ENST00000517378 RYR1P21817 5038 aa3.47□□□□□ -1.85
CDH12-203ENST00000517378 KRTAP10-8P60410 259 aa3.46□□□□□ -1.86
CDH12-203ENST00000517378 MYCBP2O75592 4640 aa3.45□□□□□ -1.86
CDH12-203ENST00000517378 RPL37P61927 97 aaKnown RBP3.45□□□□□ -1.86
CDH12-203ENST00000517378 LORP23490 312 aaPredicted RBP3.44□□□□□ -1.86
CDH12-203ENST00000517378 TNXBP22105 4242 aa3.43□□□□□ -1.86
CDH12-203ENST00000517378 KRTAP10-6P60371 365 aaPredicted RBP3.42□□□□□ -1.86
CDH12-203ENST00000517378 HSPG2P98160 4391 aa3.42□□□□□ -1.86
CDH12-203ENST00000517378 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
CDH12-203ENST00000517378 XP32Q5T750 250 aa3.41□□□□□ -1.86
CDH12-203ENST00000517378 FAT3Q8TDW7 4589 aa3.4□□□□□ -1.86
CDH12-203ENST00000517378 K7ERS5 55 aa3.4□□□□□ -1.86
CDH12-203ENST00000517378 LRP1Q07954 4544 aaKnown RBP3.4□□□□□ -1.87
CDH12-203ENST00000517378 Q5VSD8 79 aa3.39□□□□□ -1.87
CDH12-203ENST00000517378 S4R3F8 94 aa3.38□□□□□ -1.87
CDH12-203ENST00000517378 KRTAP13-4Q3LI77 160 aa3.37□□□□□ -1.87
CDH12-203ENST00000517378 ABCA13Q86UQ4 5058 aa3.37□□□□□ -1.87
CDH12-203ENST00000517378 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
CDH12-203ENST00000517378 ROMO1P60602 79 aa3.35□□□□□ -1.87
CDH12-203ENST00000517378 HERC1Q15751 4861 aa3.35□□□□□ -1.87
CDH12-203ENST00000517378 MT1HL1P0DM35 61 aa3.34□□□□□ -1.87
CDH12-203ENST00000517378 KRTAP23-1A1A580 65 aa3.33□□□□□ -1.88
CDH12-203ENST00000517378 KRTAP17-1Q9BYP8 105 aa3.33□□□□□ -1.88
CDH12-203ENST00000517378 HERC2O95714 4834 aa3.32□□□□□ -1.88
CDH12-203ENST00000517378 P0C880 135 aa3.32□□□□□ -1.88
CDH12-203ENST00000517378 BIRC6Q9NR09 4857 aa3.31□□□□□ -1.88
CDH12-203ENST00000517378 TPRXLQ17RH7 258 aa3.3□□□□□ -1.88
CDH12-203ENST00000517378 A0A0D9SG42 100 aa3.29□□□□□ -1.88
CDH12-203ENST00000517378 SEC61BP60468 96 aaKnown RBP3.28□□□□□ -1.88
CDH12-203ENST00000517378 DMBT1Q9UGM3 2413 aaPredicted RBP3.27□□□□□ -1.89
CDH12-203ENST00000517378 KRTAP12-2P59991 146 aa3.26□□□□□ -1.89
CDH12-203ENST00000517378 CRIPTQ9P021 101 aa3.26□□□□□ -1.89
CDH12-203ENST00000517378 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
CDH12-203ENST00000517378 M0QZ58 72 aa3.25□□□□□ -1.89
CDH12-203ENST00000517378 KRTAP4-5Q9BYR2 181 aa3.23□□□□□ -1.89
CDH12-203ENST00000517378 MUC2Q02817 5179 aa3.21□□□□□ -1.9
CDH12-203ENST00000517378 LPAP08519 4548 aa3.2□□□□□ -1.9
CDH12-203ENST00000517378 UBR4Q5T4S7 5183 aa3.19□□□□□ -1.9
CDH12-203ENST00000517378 RNF213Q63HN8 5207 aa3.18□□□□□ -1.9
CDH12-203ENST00000517378 SPINT4Q6UDR6 99 aa3.18□□□□□ -1.9
CDH12-203ENST00000517378 C10orf95Q9H7T3 257 aa3.18□□□□□ -1.9
CDH12-203ENST00000517378 LRP2P98164 4655 aa3.17□□□□□ -1.9
CDH12-203ENST00000517378 KRTAP15-1Q3LI76 137 aa3.13□□□□□ -1.91
CDH12-203ENST00000517378 R4GN34 69 aa3.12□□□□□ -1.91
CDH12-203ENST00000517378 KRTAP19-2Q3LHN2 52 aa3.11□□□□□ -1.91
CDH12-203ENST00000517378 KRTAP4-1Q9BYQ7 146 aa3.1□□□□□ -1.91
CDH12-203ENST00000517378 MUC17Q685J3 4493 aa3.09□□□□□ -1.91
CDH12-203ENST00000517378 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
CDH12-203ENST00000517378 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
CDH12-203ENST00000517378 FAT4Q6V0I7 4981 aa3.02□□□□□ -1.93
CDH12-203ENST00000517378 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
CDH12-203ENST00000517378 PLAC4Q8WY50 150 aa2.96□□□□□ -1.94
CDH12-203ENST00000517378 CAMK2N1Q7Z7J9 78 aa2.95□□□□□ -1.94
CDH12-203ENST00000517378 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
CDH12-203ENST00000517378 LOC100996750A0A140TA64 210 aa2.92□□□□□ -1.94
CDH12-203ENST00000517378 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
CDH12-203ENST00000517378 TNP1P09430 55 aa2.87□□□□□ -1.95
CDH12-203ENST00000517378 SPRR2GQ9BYE4 73 aa2.87□□□□□ -1.95
CDH12-203ENST00000517378 FSIP2Q5CZC0 6907 aa2.84□□□□□ -1.95
CDH12-203ENST00000517378 KRTAP19-1Q8IUB9 90 aa2.83□□□□□ -1.96
CDH12-203ENST00000517378 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
CDH12-203ENST00000517378 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
CDH12-203ENST00000517378 MT1HP80294 61 aa2.79□□□□□ -1.96
CDH12-203ENST00000517378 MT2AP02795 61 aa2.75□□□□□ -1.97
CDH12-203ENST00000517378 MT1FP04733 61 aa2.75□□□□□ -1.97
CDH12-203ENST00000517378 KRTAP19-8Q3LI54 63 aa2.74□□□□□ -1.97
CDH12-203ENST00000517378 KRTAP9-8Q9BYQ0 159 aa2.74□□□□□ -1.97
CDH12-203ENST00000517378 KRTAP19-4Q3LI73 84 aa2.74□□□□□ -1.97
CDH12-203ENST00000517378 M0R2T5 61 aa2.73□□□□□ -1.97
CDH12-203ENST00000517378 USH2AO75445 5202 aa2.72□□□□□ -1.97
CDH12-203ENST00000517378 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
CDH12-203ENST00000517378 KRTAP10-10P60014 251 aa2.71□□□□□ -1.98
CDH12-203ENST00000517378 KRTAP8-1Q8IUC2 63 aa2.69□□□□□ -1.98
CDH12-203ENST00000517378 MT1BP07438 61 aa2.68□□□□□ -1.98
CDH12-203ENST00000517378 KRTAP10-5P60370 271 aa2.68□□□□□ -1.98
CDH12-203ENST00000517378 MT1XP80297 61 aa2.67□□□□□ -1.98
CDH12-203ENST00000517378 KRTAP9-3Q9BYQ3 159 aa2.63□□□□□ -1.99
CDH12-203ENST00000517378 KRTAP4-8Q9BYQ9 185 aa2.62□□□□□ -1.99
CDH12-203ENST00000517378 KRTAP10-12P60413 245 aa2.61□□□□□ -1.99
CDH12-203ENST00000517378 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
CDH12-203ENST00000517378 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.57□□□□□ -2
CDH12-203ENST00000517378 KRTAP10-7P60409 375 aaPredicted RBP2.57□□□□□ -2
CDH12-203ENST00000517378 KRTAP9-2Q9BYQ4 174 aa2.57□□□□□ -2
CDH12-203ENST00000517378 KRTAP9-6A0A140TA67 174 aa2.55□□□□□ -2
CDH12-203ENST00000517378 PRO2289Q9P1D8 64 aa2.55□□□□□ -2
CDH12-203ENST00000517378 KRTAP9-4Q9BYQ2 154 aa2.53□□□□□ -2
CDH12-203ENST00000517378 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
CDH12-203ENST00000517378 INE1O15225 51 aa2.49□□□□□ -2.01
CDH12-203ENST00000517378 LCE3BQ5TA77 95 aa2.48□□□□□ -2.01
CDH12-203ENST00000517378 LCE5AQ5TCM9 118 aa2.48□□□□□ -2.01
CDH12-203ENST00000517378 KRTAP9-7A8MTY7 169 aa2.48□□□□□ -2.01
CDH12-203ENST00000517378 KMT2DO14686 5537 aa2.48□□□□□ -2.01
CDH12-203ENST00000517378 KRTAP19-5Q3LI72 72 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms