RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 KRTAP9-3Q9BYQ3 159 aa6.88□□□□□ -1.31
SCARNA21-201ENST00000517026 H3BPC8 53 aa6.85□□□□□ -1.31
SCARNA21-201ENST00000517026 CSAG1Q6PB30 78 aa6.84□□□□□ -1.31
SCARNA21-201ENST00000517026 KRTAP3-3Q9BYR6 98 aa6.83□□□□□ -1.32
SCARNA21-201ENST00000517026 TRAV7A0A075B6U4 112 aa6.81□□□□□ -1.32
SCARNA21-201ENST00000517026 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
SCARNA21-201ENST00000517026 LCE2BO14633 110 aa6.8□□□□□ -1.32
SCARNA21-201ENST00000517026 SMIM20Q8N5G0 67 aa6.8□□□□□ -1.32
SCARNA21-201ENST00000517026 SYNE2Q8WXH0 6885 aaKnown RBP6.79□□□□□ -1.32
SCARNA21-201ENST00000517026 A8MUN3 132 aa6.77□□□□□ -1.33
SCARNA21-201ENST00000517026 MACF1Q9UPN3 7388 aaKnown RBP6.74□□□□□ -1.33
SCARNA21-201ENST00000517026 NDUFC1O43677 76 aa6.71□□□□□ -1.34
SCARNA21-201ENST00000517026 DMAC1Q96GE9 116 aa6.69□□□□□ -1.34
SCARNA21-201ENST00000517026 SNURFQ9Y675 71 aa6.69□□□□□ -1.34
SCARNA21-201ENST00000517026 SERP2Q8N6R1 65 aa6.67□□□□□ -1.34
SCARNA21-201ENST00000517026 C20orf197Q8N268 126 aa6.64□□□□□ -1.35
SCARNA21-201ENST00000517026 KRTAP19-6Q3LI70 58 aa6.59□□□□□ -1.35
SCARNA21-201ENST00000517026 H0YAA0 97 aa6.57□□□□□ -1.36
SCARNA21-201ENST00000517026 ACYP2P14621 99 aa6.57□□□□□ -1.36
SCARNA21-201ENST00000517026 ADM2Q7Z4H4 148 aa6.56□□□□□ -1.36
SCARNA21-201ENST00000517026 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
SCARNA21-201ENST00000517026 SPRR2GQ9BYE4 73 aa6.55□□□□□ -1.36
SCARNA21-201ENST00000517026 COX7CP15954 63 aa6.53□□□□□ -1.36
SCARNA21-201ENST00000517026 SPANXA2-OT1Q8N9U9 137 aa6.51□□□□□ -1.37
SCARNA21-201ENST00000517026 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
SCARNA21-201ENST00000517026 KRTAP19-8Q3LI54 63 aa6.48□□□□□ -1.37
SCARNA21-201ENST00000517026 MT1BP07438 61 aa6.47□□□□□ -1.37
SCARNA21-201ENST00000517026 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.38
SCARNA21-201ENST00000517026 P0C880 135 aa6.46□□□□□ -1.38
SCARNA21-201ENST00000517026 Q5VV11 94 aa6.45□□□□□ -1.38
SCARNA21-201ENST00000517026 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
SCARNA21-201ENST00000517026 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
SCARNA21-201ENST00000517026 NEBP20929 6669 aa6.44□□□□□ -1.38
SCARNA21-201ENST00000517026 ANAPC13Q9BS18 74 aa6.43□□□□□ -1.38
SCARNA21-201ENST00000517026 SPTSSBQ8NFR3 76 aa6.42□□□□□ -1.38
SCARNA21-201ENST00000517026 H7BZZ5 65 aa6.39□□□□□ -1.39
SCARNA21-201ENST00000517026 MUC12Q9UKN1 5478 aa6.38□□□□□ -1.39
SCARNA21-201ENST00000517026 COA5Q86WW8 74 aa6.35□□□□□ -1.39
SCARNA21-201ENST00000517026 R4GN34 69 aa6.34□□□□□ -1.39
SCARNA21-201ENST00000517026 CCDC179H3BU77 68 aa6.33□□□□□ -1.4
SCARNA21-201ENST00000517026 M0QZ58 72 aa6.33□□□□□ -1.4
SCARNA21-201ENST00000517026 A6NN06 94 aa6.29□□□□□ -1.4
SCARNA21-201ENST00000517026 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
SCARNA21-201ENST00000517026 LINC01554Q52M75 96 aa6.24□□□□□ -1.41
SCARNA21-201ENST00000517026 KRTAP20-1Q3LI63 56 aa6.23□□□□□ -1.41
SCARNA21-201ENST00000517026 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
SCARNA21-201ENST00000517026 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
SCARNA21-201ENST00000517026 KMT2DO14686 5537 aa6.15□□□□□ -1.43
SCARNA21-201ENST00000517026 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
SCARNA21-201ENST00000517026 MT1XP80297 61 aa6.13□□□□□ -1.43
SCARNA21-201ENST00000517026 SEC61GP60059 68 aa6.12□□□□□ -1.43
SCARNA21-201ENST00000517026 SERP1Q9Y6X1 66 aa6.11□□□□□ -1.43
SCARNA21-201ENST00000517026 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
SCARNA21-201ENST00000517026 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
SCARNA21-201ENST00000517026 PRO2289Q9P1D8 64 aa6.07□□□□□ -1.44
SCARNA21-201ENST00000517026 TMEM258P61165 79 aa6.05□□□□□ -1.44
SCARNA21-201ENST00000517026 A0A1B0GU33 70 aa6.02□□□□□ -1.45
SCARNA21-201ENST00000517026 A0A1B0GU69 56 aa6□□□□□ -1.45
SCARNA21-201ENST00000517026 SPATA8Q6RVD6 105 aa6□□□□□ -1.45
SCARNA21-201ENST00000517026 A0A0D9SG42 100 aa5.98□□□□□ -1.45
SCARNA21-201ENST00000517026 KRTAP2-3P0C7H8 128 aa5.97□□□□□ -1.45
SCARNA21-201ENST00000517026 KRTAP2-4Q9BYR9 128 aa5.97□□□□□ -1.45
SCARNA21-201ENST00000517026 LINC01558Q9Y6Z2 57 aa5.9□□□□□ -1.46
SCARNA21-201ENST00000517026 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
SCARNA21-201ENST00000517026 CAMK2N1Q7Z7J9 78 aa5.88□□□□□ -1.47
SCARNA21-201ENST00000517026 PRR15LQ9BU68 103 aa5.87□□□□□ -1.47
SCARNA21-201ENST00000517026 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
SCARNA21-201ENST00000517026 SPINT4Q6UDR6 99 aa5.86□□□□□ -1.47
SCARNA21-201ENST00000517026 A8MU10 97 aa5.84□□□□□ -1.47
SCARNA21-201ENST00000517026 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
SCARNA21-201ENST00000517026 SMIM26A0A096LP01 95 aa5.82□□□□□ -1.48
SCARNA21-201ENST00000517026 KRTAP4-8A0A0G2JLE6 195 aa5.81□□□□□ -1.48
SCARNA21-201ENST00000517026 KRTAP4-8Q9BYQ9 185 aa5.81□□□□□ -1.48
SCARNA21-201ENST00000517026 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
SCARNA21-201ENST00000517026 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
SCARNA21-201ENST00000517026 PCP4P48539 62 aa5.76□□□□□ -1.49
SCARNA21-201ENST00000517026 KRTAP2-2Q9BYT5 123 aa5.75□□□□□ -1.49
SCARNA21-201ENST00000517026 KRTAP2-1Q9BYU5 128 aa5.75□□□□□ -1.49
SCARNA21-201ENST00000517026 SPRR2EP22531 72 aa5.73□□□□□ -1.49
SCARNA21-201ENST00000517026 SPRR2BP35325 72 aa5.73□□□□□ -1.49
SCARNA21-201ENST00000517026 SPRR2AP35326 72 aa5.73□□□□□ -1.49
SCARNA21-201ENST00000517026 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
SCARNA21-201ENST00000517026 UQCR11O14957 56 aa5.69□□□□□ -1.5
SCARNA21-201ENST00000517026 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
SCARNA21-201ENST00000517026 PSPHP1O15172 72 aa5.66□□□□□ -1.5
SCARNA21-201ENST00000517026 Q1T7F1 81 aa5.66□□□□□ -1.5
SCARNA21-201ENST00000517026 V9GYY9 64 aa5.65□□□□□ -1.5
SCARNA21-201ENST00000517026 MIR22HGQ0VDD5 57 aa5.6□□□□□ -1.51
SCARNA21-201ENST00000517026 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
SCARNA21-201ENST00000517026 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
SCARNA21-201ENST00000517026 SPRR2DP22532 72 aa5.54□□□□□ -1.52
SCARNA21-201ENST00000517026 GPR98Q8WXG9 6306 aa5.52□□□□□ -1.53
SCARNA21-201ENST00000517026 TNP1P09430 55 aa5.47□□□□□ -1.53
SCARNA21-201ENST00000517026 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
SCARNA21-201ENST00000517026 A6NED7 52 aa5.45□□□□□ -1.54
SCARNA21-201ENST00000517026 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
SCARNA21-201ENST00000517026 K7ERS5 55 aa5.41□□□□□ -1.54
SCARNA21-201ENST00000517026 MT1EP04732 61 aa5.41□□□□□ -1.54
SCARNA21-201ENST00000517026 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
SCARNA21-201ENST00000517026 LCE3AQ5TA76 89 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms