RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 LYSTQ99698 3801 aa1.7□□□□□ -2.14
HMGCR-213ENST00000515776 ZFYVE26Q68DK2 2539 aa1.7□□□□□ -2.14
HMGCR-213ENST00000515776 GCN1Q92616 2671 aaKnown RBP1.7□□□□□ -2.14
HMGCR-213ENST00000515776 Q5VSD8 79 aa1.7□□□□□ -2.14
HMGCR-213ENST00000515776 COL7A1Q02388 2944 aa1.69□□□□□ -2.14
HMGCR-213ENST00000515776 PDZD2O15018 2839 aa1.69□□□□□ -2.14
HMGCR-213ENST00000515776 CSMD2Q7Z408 3487 aa1.68□□□□□ -2.14
HMGCR-213ENST00000515776 C9orf92A6NGG3 77 aa1.68□□□□□ -2.14
HMGCR-213ENST00000515776 MUC3AQ02505 3323 aa1.68□□□□□ -2.14
HMGCR-213ENST00000515776 DMBT1Q9UGM3 2413 aaPredicted RBP1.68□□□□□ -2.14
HMGCR-213ENST00000515776 UNC79Q9P2D8 2635 aa1.68□□□□□ -2.14
HMGCR-213ENST00000515776 MTORP42345 2549 aa1.67□□□□□ -2.14
HMGCR-213ENST00000515776 RPS29P62273 56 aaKnown RBP1.67□□□□□ -2.14
HMGCR-213ENST00000515776 DOPEY1Q5JWR5 2465 aa1.67□□□□□ -2.14
HMGCR-213ENST00000515776 TGP01266 2768 aa1.67□□□□□ -2.14
HMGCR-213ENST00000515776 CMYA5Q8N3K9 4069 aa1.66□□□□□ -2.14
HMGCR-213ENST00000515776 DNAH2Q9P225 4427 aa1.66□□□□□ -2.14
HMGCR-213ENST00000515776 SMR3AQ99954 134 aa1.66□□□□□ -2.14
HMGCR-213ENST00000515776 ITPR3Q14573 2671 aa1.66□□□□□ -2.14
HMGCR-213ENST00000515776 DNAH6Q9C0G6 4158 aa1.66□□□□□ -2.14
HMGCR-213ENST00000515776 CHD8Q9HCK8 2581 aa1.65□□□□□ -2.14
HMGCR-213ENST00000515776 TTC28Q96AY4 2481 aa1.65□□□□□ -2.14
HMGCR-213ENST00000515776 HIVEP1P15822 2718 aa1.65□□□□□ -2.15
HMGCR-213ENST00000515776 MXRA5Q9NR99 2828 aa1.64□□□□□ -2.15
HMGCR-213ENST00000515776 CENPEQ02224 2701 aa1.64□□□□□ -2.15
HMGCR-213ENST00000515776 PRKDCP78527 4128 aaKnown RBP1.64□□□□□ -2.15
HMGCR-213ENST00000515776 DNAH3Q8TD57 4116 aa1.64□□□□□ -2.15
HMGCR-213ENST00000515776 MYO9AB2RTY4 2548 aa1.64□□□□□ -2.15
HMGCR-213ENST00000515776 DNAH7Q8WXX0 4024 aa1.64□□□□□ -2.15
HMGCR-213ENST00000515776 FBN3Q75N90 2809 aa1.64□□□□□ -2.15
HMGCR-213ENST00000515776 PKD1L2Q7Z442 2459 aa1.64□□□□□ -2.15
HMGCR-213ENST00000515776 HELZ2Q9BYK8 2649 aaKnown RBP1.64□□□□□ -2.15
HMGCR-213ENST00000515776 NBEAL1Q6ZS30 2694 aa1.63□□□□□ -2.15
HMGCR-213ENST00000515776 ANKRD11Q6UB99 2663 aaPredicted RBP1.63□□□□□ -2.15
HMGCR-213ENST00000515776 HUWE1Q7Z6Z7 4374 aaKnown RBP1.62□□□□□ -2.15
HMGCR-213ENST00000515776 FBN2P35556 2912 aa1.62□□□□□ -2.15
HMGCR-213ENST00000515776 CFAP46Q8IYW2 2715 aa1.62□□□□□ -2.15
HMGCR-213ENST00000515776 CEP295Q9C0D2 2601 aa1.62□□□□□ -2.15
HMGCR-213ENST00000515776 PIEZO1Q92508 2521 aa1.62□□□□□ -2.15
HMGCR-213ENST00000515776 SETD2Q9BYW2 2564 aaPredicted RBP1.61□□□□□ -2.15
HMGCR-213ENST00000515776 APOBP04114 4563 aaKnown RBP1.61□□□□□ -2.15
HMGCR-213ENST00000515776 SACSQ9NZJ4 4579 aa1.6□□□□□ -2.15
HMGCR-213ENST00000515776 PKD1L1Q8TDX9 2849 aa1.6□□□□□ -2.15
HMGCR-213ENST00000515776 USP9YO00507 2555 aaPredicted RBP1.6□□□□□ -2.15
HMGCR-213ENST00000515776 KMT2AQ03164 3969 aa1.59□□□□□ -2.15
HMGCR-213ENST00000515776 STAB2Q8WWQ8 2551 aa1.59□□□□□ -2.15
HMGCR-213ENST00000515776 LRRK2Q5S007 2527 aa1.59□□□□□ -2.16
HMGCR-213ENST00000515776 HECTD4Q9Y4D8 3996 aa1.58□□□□□ -2.16
HMGCR-213ENST00000515776 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
HMGCR-213ENST00000515776 TNP1P09430 55 aa1.57□□□□□ -2.16
HMGCR-213ENST00000515776 EPG5Q9HCE0 2579 aa1.57□□□□□ -2.16
HMGCR-213ENST00000515776 ZANQ9Y493 2812 aa1.56□□□□□ -2.16
HMGCR-213ENST00000515776 ZNF292O60281 2723 aa1.55□□□□□ -2.16
HMGCR-213ENST00000515776 ITPR2Q14571 2701 aa1.55□□□□□ -2.16
HMGCR-213ENST00000515776 ZNF469Q96JG9 3925 aaPredicted RBP1.55□□□□□ -2.16
HMGCR-213ENST00000515776 ACANP16112 2415 aa1.55□□□□□ -2.16
HMGCR-213ENST00000515776 TENM3Q9P273 2699 aa1.54□□□□□ -2.16
HMGCR-213ENST00000515776 CACNA1AO00555 2505 aa1.54□□□□□ -2.16
HMGCR-213ENST00000515776 PKD1P98161 4303 aa1.53□□□□□ -2.16
HMGCR-213ENST00000515776 BDP1A6H8Y1 2624 aa1.53□□□□□ -2.16
HMGCR-213ENST00000515776 LRP1Q07954 4544 aaKnown RBP1.53□□□□□ -2.16
HMGCR-213ENST00000515776 TEP1Q99973 2627 aaKnown RBP1.52□□□□□ -2.17
HMGCR-213ENST00000515776 ABCA12Q86UK0 2595 aa1.52□□□□□ -2.17
HMGCR-213ENST00000515776 VPS13BQ7Z7G8 4022 aa1.51□□□□□ -2.17
HMGCR-213ENST00000515776 FAT3Q8TDW7 4589 aa1.51□□□□□ -2.17
HMGCR-213ENST00000515776 ATRQ13535 2644 aa1.51□□□□□ -2.17
HMGCR-213ENST00000515776 FASNP49327 2511 aaKnown RBP1.5□□□□□ -2.17
HMGCR-213ENST00000515776 DNAH5Q8TE73 4624 aa1.5□□□□□ -2.17
HMGCR-213ENST00000515776 USP24Q9UPU5 2620 aa1.5□□□□□ -2.17
HMGCR-213ENST00000515776 FLGP20930 4061 aaPredicted RBP1.5□□□□□ -2.17
HMGCR-213ENST00000515776 PKHD1L1Q86WI1 4243 aa1.49□□□□□ -2.17
HMGCR-213ENST00000515776 ACACBO00763 2458 aa1.49□□□□□ -2.17
HMGCR-213ENST00000515776 NSD1Q96L73 2696 aaPredicted RBP1.49□□□□□ -2.17
HMGCR-213ENST00000515776 PLECQ15149 4684 aaKnown RBP1.48□□□□□ -2.17
HMGCR-213ENST00000515776 FAT2Q9NYQ8 4349 aa1.47□□□□□ -2.17
HMGCR-213ENST00000515776 NOTCH1P46531 2555 aa1.47□□□□□ -2.17
HMGCR-213ENST00000515776 HSPG2P98160 4391 aa1.47□□□□□ -2.17
HMGCR-213ENST00000515776 DYNC1H1Q14204 4646 aaKnown RBP1.46□□□□□ -2.18
HMGCR-213ENST00000515776 TNXBP22105 4242 aa1.46□□□□□ -2.18
HMGCR-213ENST00000515776 STARD9Q9P2P6 4700 aa1.46□□□□□ -2.18
HMGCR-213ENST00000515776 MYO18BQ8IUG5 2567 aa1.46□□□□□ -2.18
HMGCR-213ENST00000515776 LRP1BQ9NZR2 4599 aa1.45□□□□□ -2.18
HMGCR-213ENST00000515776 FLNAP21333 2647 aaKnown RBP1.45□□□□□ -2.18
HMGCR-213ENST00000515776 PKHD1P08F94 4074 aa1.45□□□□□ -2.18
HMGCR-213ENST00000515776 KRTAP8-1Q8IUC2 63 aa1.44□□□□□ -2.18
HMGCR-213ENST00000515776 MAST4O15021 2626 aa1.44□□□□□ -2.18
HMGCR-213ENST00000515776 TENM1Q9UKZ4 2725 aa1.44□□□□□ -2.18
HMGCR-213ENST00000515776 POLQO75417 2590 aa1.44□□□□□ -2.18
HMGCR-213ENST00000515776 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
HMGCR-213ENST00000515776 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
HMGCR-213ENST00000515776 KRTAP2-1Q9BYU5 128 aa1.42□□□□□ -2.18
HMGCR-213ENST00000515776 FLNCQ14315 2725 aa1.42□□□□□ -2.18
HMGCR-213ENST00000515776 FLNBO75369 2602 aaKnown RBP1.41□□□□□ -2.18
HMGCR-213ENST00000515776 KRTAP10-4P60372 401 aaPredicted RBP1.4□□□□□ -2.19
HMGCR-213ENST00000515776 KRTAP6-3Q3LI67 103 aa1.4□□□□□ -2.19
HMGCR-213ENST00000515776 STAB1Q9NY15 2570 aa1.4□□□□□ -2.19
HMGCR-213ENST00000515776 IGSF10Q6WRI0 2623 aa1.39□□□□□ -2.19
HMGCR-213ENST00000515776 MGAM2Q2M2H8 2515 aa1.37□□□□□ -2.19
HMGCR-213ENST00000515776 FAT1Q14517 4588 aa1.37□□□□□ -2.19
HMGCR-213ENST00000515776 SMR3BP02814 79 aaPredicted RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms