RNA–Protein interactions for RNA: ENST00000515155.1

FAM13A-221, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 4

Gene FAM13A, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-221ENST00000515155 TMEM258P61165 79 aa4.56□□□□□ -1.68
FAM13A-221ENST00000515155 S4R3F8 94 aa4.55□□□□□ -1.68
FAM13A-221ENST00000515155 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
FAM13A-221ENST00000515155 LCA10Q71F78 164 aa4.52□□□□□ -1.69
FAM13A-221ENST00000515155 KRTAP3-3Q9BYR6 98 aa4.52□□□□□ -1.69
FAM13A-221ENST00000515155 CSAG1Q6PB30 78 aa4.49□□□□□ -1.69
FAM13A-221ENST00000515155 COA5Q86WW8 74 aa4.48□□□□□ -1.69
FAM13A-221ENST00000515155 M0R2T5 61 aa4.47□□□□□ -1.69
FAM13A-221ENST00000515155 CHKB-CPT1BH3BT56 60 aa4.46□□□□□ -1.7
FAM13A-221ENST00000515155 SPTSSBQ8NFR3 76 aa4.46□□□□□ -1.7
FAM13A-221ENST00000515155 KRTAP10-6P60371 365 aaPredicted RBP4.44□□□□□ -1.7
FAM13A-221ENST00000515155 H0YAA0 97 aa4.43□□□□□ -1.7
FAM13A-221ENST00000515155 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
FAM13A-221ENST00000515155 SERP1Q9Y6X1 66 aa4.41□□□□□ -1.7
FAM13A-221ENST00000515155 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
FAM13A-221ENST00000515155 RPS28P62857 69 aaKnown RBP4.37□□□□□ -1.71
FAM13A-221ENST00000515155 MT2AP02795 61 aa4.35□□□□□ -1.71
FAM13A-221ENST00000515155 MT1FP04733 61 aa4.32□□□□□ -1.72
FAM13A-221ENST00000515155 ADM2Q7Z4H4 148 aa4.32□□□□□ -1.72
FAM13A-221ENST00000515155 KRTAP3-2Q9BYR7 98 aa4.32□□□□□ -1.72
FAM13A-221ENST00000515155 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
FAM13A-221ENST00000515155 CRIPTQ9P021 101 aa4.29□□□□□ -1.72
FAM13A-221ENST00000515155 SMIM26A0A096LP01 95 aa4.28□□□□□ -1.72
FAM13A-221ENST00000515155 SEC61GP60059 68 aa4.28□□□□□ -1.72
FAM13A-221ENST00000515155 LINC01558Q9Y6Z2 57 aa4.28□□□□□ -1.72
FAM13A-221ENST00000515155 P0C880 135 aa4.27□□□□□ -1.73
FAM13A-221ENST00000515155 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
FAM13A-221ENST00000515155 V9GYY9 64 aa4.26□□□□□ -1.73
FAM13A-221ENST00000515155 Q1T7F1 81 aa4.25□□□□□ -1.73
FAM13A-221ENST00000515155 A0A1B0GU69 56 aa4.24□□□□□ -1.73
FAM13A-221ENST00000515155 PRR15LQ9BU68 103 aa4.23□□□□□ -1.73
FAM13A-221ENST00000515155 LCE2DQ5TA82 110 aaPredicted RBP4.22□□□□□ -1.73
FAM13A-221ENST00000515155 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
FAM13A-221ENST00000515155 M0QZ58 72 aa4.2□□□□□ -1.74
FAM13A-221ENST00000515155 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
FAM13A-221ENST00000515155 A0A1B0GU33 70 aa4.18□□□□□ -1.74
FAM13A-221ENST00000515155 R4GN34 69 aa4.18□□□□□ -1.74
FAM13A-221ENST00000515155 Q5VV11 94 aa4.16□□□□□ -1.74
FAM13A-221ENST00000515155 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
FAM13A-221ENST00000515155 LCE2BO14633 110 aa4.13□□□□□ -1.75
FAM13A-221ENST00000515155 KRTAP13-4Q3LI77 160 aa4.12□□□□□ -1.75
FAM13A-221ENST00000515155 PSPHP1O15172 72 aa4.11□□□□□ -1.75
FAM13A-221ENST00000515155 UQCR11O14957 56 aa4.1□□□□□ -1.75
FAM13A-221ENST00000515155 A6NN06 94 aa4.09□□□□□ -1.75
FAM13A-221ENST00000515155 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.75
FAM13A-221ENST00000515155 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
FAM13A-221ENST00000515155 MT1BP07438 61 aa4.06□□□□□ -1.76
FAM13A-221ENST00000515155 LINC01554Q52M75 96 aa4.04□□□□□ -1.76
FAM13A-221ENST00000515155 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.76
FAM13A-221ENST00000515155 USH2AO75445 5202 aa4.03□□□□□ -1.76
FAM13A-221ENST00000515155 A0A0D9SG42 100 aa4□□□□□ -1.77
FAM13A-221ENST00000515155 A6NED7 52 aa4□□□□□ -1.77
FAM13A-221ENST00000515155 PLAC4Q8WY50 150 aa4□□□□□ -1.77
FAM13A-221ENST00000515155 A8MU10 97 aa3.98□□□□□ -1.77
FAM13A-221ENST00000515155 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
FAM13A-221ENST00000515155 KRTAP19-6Q3LI70 58 aa3.96□□□□□ -1.78
FAM13A-221ENST00000515155 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
FAM13A-221ENST00000515155 KRTAP12-2P59991 146 aa3.94□□□□□ -1.78
FAM13A-221ENST00000515155 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
FAM13A-221ENST00000515155 FSIP2Q5CZC0 6907 aa3.93□□□□□ -1.78
FAM13A-221ENST00000515155 SPINT4Q6UDR6 99 aa3.92□□□□□ -1.78
FAM13A-221ENST00000515155 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
FAM13A-221ENST00000515155 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
FAM13A-221ENST00000515155 MT1XP80297 61 aa3.9□□□□□ -1.79
FAM13A-221ENST00000515155 PRO2289Q9P1D8 64 aa3.9□□□□□ -1.79
FAM13A-221ENST00000515155 K7ERS5 55 aa3.89□□□□□ -1.79
FAM13A-221ENST00000515155 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
FAM13A-221ENST00000515155 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
FAM13A-221ENST00000515155 BRK1Q8WUW1 75 aa3.81□□□□□ -1.8
FAM13A-221ENST00000515155 FCGBPQ9Y6R7 5405 aaPredicted RBP3.81□□□□□ -1.8
FAM13A-221ENST00000515155 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
FAM13A-221ENST00000515155 H3BS24 57 aa3.74□□□□□ -1.81
FAM13A-221ENST00000515155 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
FAM13A-221ENST00000515155 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
FAM13A-221ENST00000515155 TNP1P09430 55 aa3.69□□□□□ -1.82
FAM13A-221ENST00000515155 ROMO1P60602 79 aa3.69□□□□□ -1.82
FAM13A-221ENST00000515155 PRO0628Q9UI54 55 aa3.69□□□□□ -1.82
FAM13A-221ENST00000515155 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
FAM13A-221ENST00000515155 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
FAM13A-221ENST00000515155 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.64□□□□□ -1.83
FAM13A-221ENST00000515155 PMAIP1Q13794 54 aa3.63□□□□□ -1.83
FAM13A-221ENST00000515155 KRTAP23-1A1A580 65 aa3.61□□□□□ -1.83
FAM13A-221ENST00000515155 KRTAP4-8A0A0G2JLE6 195 aa3.59□□□□□ -1.83
FAM13A-221ENST00000515155 KRTAP4-8Q9BYQ9 185 aa3.59□□□□□ -1.83
FAM13A-221ENST00000515155 MACF1Q9UPN3 7388 aaKnown RBP3.57□□□□□ -1.84
FAM13A-221ENST00000515155 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
FAM13A-221ENST00000515155 KMT2DO14686 5537 aa3.54□□□□□ -1.84
FAM13A-221ENST00000515155 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
FAM13A-221ENST00000515155 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
FAM13A-221ENST00000515155 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
FAM13A-221ENST00000515155 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
FAM13A-221ENST00000515155 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
FAM13A-221ENST00000515155 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
FAM13A-221ENST00000515155 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
FAM13A-221ENST00000515155 KRTAP19-5Q3LI72 72 aa3.46□□□□□ -1.86
FAM13A-221ENST00000515155 SPRR2FQ96RM1 72 aa3.45□□□□□ -1.86
FAM13A-221ENST00000515155 KTN1-AS1Q86SY8 53 aa3.44□□□□□ -1.86
FAM13A-221ENST00000515155 MT1EP04732 61 aa3.43□□□□□ -1.86
FAM13A-221ENST00000515155 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
FAM13A-221ENST00000515155 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms