RNA–Protein interactions for RNA: ENST00000515155.1

FAM13A-221, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 4

Gene FAM13A, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-221ENST00000515155 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
FAM13A-221ENST00000515155 CCDC180Q9P1Z9 1646 aa19.18■□□□□ 0.66
FAM13A-221ENST00000515155 ABCC9O60706 1549 aa18.35■□□□□ 0.53
FAM13A-221ENST00000515155 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
FAM13A-221ENST00000515155 DCAF1Q9Y4B6 1507 aa18.16■□□□□ 0.5
FAM13A-221ENST00000515155 MYO15BQ96JP2 1530 aa18.11■□□□□ 0.49
FAM13A-221ENST00000515155 DCAF8L2P0C7V8 631 aa18.02■□□□□ 0.48
FAM13A-221ENST00000515155 NACADO15069 1562 aa18■□□□□ 0.47
FAM13A-221ENST00000515155 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
FAM13A-221ENST00000515155 SCRIBQ14160 1630 aa17.48■□□□□ 0.39
FAM13A-221ENST00000515155 SHROOM4Q9ULL8 1493 aa17.42■□□□□ 0.38
FAM13A-221ENST00000515155 UNC13AQ9UPW8 1703 aa17.34■□□□□ 0.37
FAM13A-221ENST00000515155 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
FAM13A-221ENST00000515155 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
FAM13A-221ENST00000515155 CECR2Q9BXF3 1484 aa16.94■□□□□ 0.3
FAM13A-221ENST00000515155 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.3
FAM13A-221ENST00000515155 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
FAM13A-221ENST00000515155 EIF4G1Q04637 1599 aaKnown RBP16.82■□□□□ 0.28
FAM13A-221ENST00000515155 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
FAM13A-221ENST00000515155 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
FAM13A-221ENST00000515155 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
FAM13A-221ENST00000515155 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
FAM13A-221ENST00000515155 SMARCA2P51531 1590 aa16.67■□□□□ 0.26
FAM13A-221ENST00000515155 NCAPD3P42695 1498 aa16.65■□□□□ 0.26
FAM13A-221ENST00000515155 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
FAM13A-221ENST00000515155 CC2D2AQ9P2K1 1620 aa16.62■□□□□ 0.25
FAM13A-221ENST00000515155 WIZO95785 1651 aa16.59■□□□□ 0.25
FAM13A-221ENST00000515155 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
FAM13A-221ENST00000515155 BAZ1BQ9UIG0 1483 aaKnown RBP16.53■□□□□ 0.24
FAM13A-221ENST00000515155 DNAJC5BQ9UF47 199 aa16.52■□□□□ 0.24
FAM13A-221ENST00000515155 TOP2AP11388 1531 aaKnown RBP16.51■□□□□ 0.23
FAM13A-221ENST00000515155 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
FAM13A-221ENST00000515155 CADPSQ9ULU8 1353 aa16.17■□□□□ 0.18
FAM13A-221ENST00000515155 CFTRP13569 1480 aa16.16■□□□□ 0.18
FAM13A-221ENST00000515155 LAMC3Q9Y6N6 1575 aa16.07■□□□□ 0.16
FAM13A-221ENST00000515155 NESP48681 1621 aa16.01■□□□□ 0.15
FAM13A-221ENST00000515155 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
FAM13A-221ENST00000515155 FANCD2Q9BXW9 1451 aa15.94■□□□□ 0.14
FAM13A-221ENST00000515155 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
FAM13A-221ENST00000515155 CEP164Q9UPV0 1460 aa15.87■□□□□ 0.13
FAM13A-221ENST00000515155 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
FAM13A-221ENST00000515155 WRNQ14191 1432 aaPredicted RBP eCLIP15.84■□□□□ 0.13
FAM13A-221ENST00000515155 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
FAM13A-221ENST00000515155 ERCC6Q03468 1493 aa15.8■□□□□ 0.12
FAM13A-221ENST00000515155 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
FAM13A-221ENST00000515155 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
FAM13A-221ENST00000515155 CUX1P39880 1505 aa15.75■□□□□ 0.11
FAM13A-221ENST00000515155 TRIM41Q8WV44 630 aa15.75■□□□□ 0.11
FAM13A-221ENST00000515155 URB2Q14146 1524 aaKnown RBP15.73■□□□□ 0.11
FAM13A-221ENST00000515155 DNMBPQ6XZF7 1577 aa15.73■□□□□ 0.11
FAM13A-221ENST00000515155 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
FAM13A-221ENST00000515155 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
FAM13A-221ENST00000515155 SYNJ1O43426 1573 aa15.7■□□□□ 0.1
FAM13A-221ENST00000515155 WDR62O43379 1518 aa15.7■□□□□ 0.1
FAM13A-221ENST00000515155 BIVM-ERCC5R4GMW8 1640 aa15.69■□□□□ 0.1
FAM13A-221ENST00000515155 THOC2Q8NI27 1593 aaKnown RBP15.66■□□□□ 0.1
FAM13A-221ENST00000515155 POLA1P09884 1462 aaPredicted RBP15.63■□□□□ 0.09
FAM13A-221ENST00000515155 FGD5Q6ZNL6 1462 aa15.63■□□□□ 0.09
FAM13A-221ENST00000515155 SOGA1O94964 1423 aa15.59■□□□□ 0.09
FAM13A-221ENST00000515155 CUX2O14529 1486 aa15.57■□□□□ 0.08
FAM13A-221ENST00000515155 IFT140Q96RY7 1462 aa15.55■□□□□ 0.08
FAM13A-221ENST00000515155 ABCA10Q8WWZ4 1543 aa15.54■□□□□ 0.08
FAM13A-221ENST00000515155 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.08
FAM13A-221ENST00000515155 EEA1Q15075 1411 aa15.51■□□□□ 0.07
FAM13A-221ENST00000515155 KIF27Q86VH2 1401 aa15.5■□□□□ 0.07
FAM13A-221ENST00000515155 TARBP1Q13395 1621 aaKnown RBP15.5■□□□□ 0.07
FAM13A-221ENST00000515155 WDR97A6NE52 1622 aa15.46■□□□□ 0.06
FAM13A-221ENST00000515155 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
FAM13A-221ENST00000515155 RUSC2Q8N2Y8 1516 aa15.41■□□□□ 0.06
FAM13A-221ENST00000515155 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
FAM13A-221ENST00000515155 IGF1RP08069 1367 aa15.4■□□□□ 0.06
FAM13A-221ENST00000515155 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
FAM13A-221ENST00000515155 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
FAM13A-221ENST00000515155 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
FAM13A-221ENST00000515155 AQRO60306 1485 aaKnown RBP eCLIP15.38■□□□□ 0.05
FAM13A-221ENST00000515155 ERICH3Q5RHP9 1530 aa15.36■□□□□ 0.05
FAM13A-221ENST00000515155 GRIN2BQ13224 1484 aa15.35■□□□□ 0.05
FAM13A-221ENST00000515155 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
FAM13A-221ENST00000515155 PRXQ9BXM0 1461 aa15.32■□□□□ 0.04
FAM13A-221ENST00000515155 EIF4G3O43432 1585 aaKnown RBP15.31■□□□□ 0.04
FAM13A-221ENST00000515155 CARMIL1Q5VZK9 1371 aa15.3■□□□□ 0.04
FAM13A-221ENST00000515155 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.04
FAM13A-221ENST00000515155 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
FAM13A-221ENST00000515155 CUL7Q14999 1698 aa15.24■□□□□ 0.03
FAM13A-221ENST00000515155 SNAPC4Q5SXM2 1469 aa15.23■□□□□ 0.03
FAM13A-221ENST00000515155 RAPGEF2Q9Y4G8 1499 aa15.23■□□□□ 0.03
FAM13A-221ENST00000515155 KIF21BO75037 1637 aa15.23■□□□□ 0.03
FAM13A-221ENST00000515155 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
FAM13A-221ENST00000515155 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
FAM13A-221ENST00000515155 ADAMTS12P58397 1594 aa15.2■□□□□ 0.02
FAM13A-221ENST00000515155 GOLGA3Q08378 1498 aa15.2■□□□□ 0.02
FAM13A-221ENST00000515155 CHMP7Q8WUX9 453 aaPredicted RBP15.16■□□□□ 0.02
FAM13A-221ENST00000515155 LOC105371045A0A1W2PR82 267 aa15.15■□□□□ 0.02
FAM13A-221ENST00000515155 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
FAM13A-221ENST00000515155 TNIKQ9UKE5 1360 aa15.13■□□□□ 0.01
FAM13A-221ENST00000515155 UBTFP17480 764 aaKnown RBP15.11■□□□□ 0.01
FAM13A-221ENST00000515155 NUP160Q12769 1436 aa15.1■□□□□ 0.01
FAM13A-221ENST00000515155 FBLN2P98095 1184 aa15.08■□□□□ 0
FAM13A-221ENST00000515155 KIAA0586Q9BVV6 1533 aa15.06■□□□□ 0
FAM13A-221ENST00000515155 EHMT2Q96KQ7 1210 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms