RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 RYR1P21817 5038 aa9.08□□□□□ -0.96
SNX2-213ENST00000514949 XP32Q5T750 250 aa9.04□□□□□ -0.96
SNX2-213ENST00000514949 KRTAP3-3Q9BYR6 98 aa9.01□□□□□ -0.97
SNX2-213ENST00000514949 DMBT1Q9UGM3 2413 aaPredicted RBP9□□□□□ -0.97
SNX2-213ENST00000514949 MYCBP2O75592 4640 aa8.97□□□□□ -0.97
SNX2-213ENST00000514949 KRTAP17-1Q9BYP8 105 aa8.94□□□□□ -0.98
SNX2-213ENST00000514949 MT1HL1P0DM35 61 aa8.93□□□□□ -0.98
SNX2-213ENST00000514949 KRTAP10-6P60371 365 aaPredicted RBP8.92□□□□□ -0.98
SNX2-213ENST00000514949 CSAG1Q6PB30 78 aa8.92□□□□□ -0.98
SNX2-213ENST00000514949 LINC01554Q52M75 96 aa8.91□□□□□ -0.98
SNX2-213ENST00000514949 S4R3F8 94 aa8.88□□□□□ -0.99
SNX2-213ENST00000514949 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
SNX2-213ENST00000514949 K7ERS5 55 aa8.85□□□□□ -0.99
SNX2-213ENST00000514949 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
SNX2-213ENST00000514949 TPRXLQ17RH7 258 aa8.77□□□□□ -1.01
SNX2-213ENST00000514949 KRTAP13-4Q3LI77 160 aa8.77□□□□□ -1.01
SNX2-213ENST00000514949 EPPK1P58107 5090 aaKnown RBP8.77□□□□□ -1.01
SNX2-213ENST00000514949 KRTAP25-1Q3LHN0 102 aa8.75□□□□□ -1.01
SNX2-213ENST00000514949 LRP2P98164 4655 aa8.7□□□□□ -1.02
SNX2-213ENST00000514949 P0C880 135 aa8.69□□□□□ -1.02
SNX2-213ENST00000514949 LPAP08519 4548 aa8.67□□□□□ -1.02
SNX2-213ENST00000514949 ROMO1P60602 79 aa8.66□□□□□ -1.02
SNX2-213ENST00000514949 A0A0D9SG42 100 aa8.61□□□□□ -1.03
SNX2-213ENST00000514949 M0QZ58 72 aa8.51□□□□□ -1.05
SNX2-213ENST00000514949 ABCA13Q86UQ4 5058 aa8.49□□□□□ -1.05
SNX2-213ENST00000514949 BIRC6Q9NR09 4857 aa8.49□□□□□ -1.05
SNX2-213ENST00000514949 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
SNX2-213ENST00000514949 CRIPTQ9P021 101 aa8.47□□□□□ -1.05
SNX2-213ENST00000514949 KRTAP12-1P59990 96 aa8.46□□□□□ -1.06
SNX2-213ENST00000514949 KRTAP4-5Q9BYR2 181 aa8.46□□□□□ -1.06
SNX2-213ENST00000514949 SEC61BP60468 96 aaKnown RBP8.41□□□□□ -1.06
SNX2-213ENST00000514949 MUC17Q685J3 4493 aa8.41□□□□□ -1.06
SNX2-213ENST00000514949 HERC2O95714 4834 aa8.36□□□□□ -1.07
SNX2-213ENST00000514949 SPINT4Q6UDR6 99 aa8.35□□□□□ -1.07
SNX2-213ENST00000514949 KRTAP4-1Q9BYQ7 146 aa8.25□□□□□ -1.09
SNX2-213ENST00000514949 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
SNX2-213ENST00000514949 R4GN34 69 aa8.22□□□□□ -1.09
SNX2-213ENST00000514949 KRTAP19-2Q3LHN2 52 aa8.21□□□□□ -1.1
SNX2-213ENST00000514949 J3QL48 77 aa8.19□□□□□ -1.1
SNX2-213ENST00000514949 LORP23490 312 aaPredicted RBP8.11□□□□□ -1.11
SNX2-213ENST00000514949 PCLOQ9Y6V0 5065 aa8.04□□□□□ -1.12
SNX2-213ENST00000514949 FLGP20930 4061 aaPredicted RBP8.02□□□□□ -1.13
SNX2-213ENST00000514949 KRTAP15-1Q3LI76 137 aa7.99□□□□□ -1.13
SNX2-213ENST00000514949 H3BS24 57 aa7.94□□□□□ -1.14
SNX2-213ENST00000514949 HERC1Q15751 4861 aa7.86□□□□□ -1.15
SNX2-213ENST00000514949 MUC2Q02817 5179 aa7.86□□□□□ -1.15
SNX2-213ENST00000514949 HMCN2Q8NDA2 5059 aa7.81□□□□□ -1.16
SNX2-213ENST00000514949 CAMK2N1Q7Z7J9 78 aa7.77□□□□□ -1.17
SNX2-213ENST00000514949 PP632Q6XCG6 107 aa7.75□□□□□ -1.17
SNX2-213ENST00000514949 LCE2CQ5TA81 110 aa7.69□□□□□ -1.18
SNX2-213ENST00000514949 NDUFAF8A1L188 74 aa7.66□□□□□ -1.18
SNX2-213ENST00000514949 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
SNX2-213ENST00000514949 KRTAP23-1A1A580 65 aa7.58□□□□□ -1.2
SNX2-213ENST00000514949 SPRR2GQ9BYE4 73 aa7.58□□□□□ -1.2
SNX2-213ENST00000514949 TNP1P09430 55 aa7.54□□□□□ -1.2
SNX2-213ENST00000514949 FAT4Q6V0I7 4981 aa7.53□□□□□ -1.2
SNX2-213ENST00000514949 KRTAP19-1Q8IUB9 90 aa7.49□□□□□ -1.21
SNX2-213ENST00000514949 MT1HP80294 61 aa7.45□□□□□ -1.22
SNX2-213ENST00000514949 RNF213Q63HN8 5207 aa7.4□□□□□ -1.22
SNX2-213ENST00000514949 M0R2T5 61 aa7.37□□□□□ -1.23
SNX2-213ENST00000514949 UBR4Q5T4S7 5183 aa7.37□□□□□ -1.23
SNX2-213ENST00000514949 MT2AP02795 61 aa7.33□□□□□ -1.24
SNX2-213ENST00000514949 MT1FP04733 61 aa7.32□□□□□ -1.24
SNX2-213ENST00000514949 KRTAP9-8Q9BYQ0 159 aa7.31□□□□□ -1.24
SNX2-213ENST00000514949 KRTAP10-10P60014 251 aa7.27□□□□□ -1.25
SNX2-213ENST00000514949 KRTAP19-8Q3LI54 63 aa7.25□□□□□ -1.25
SNX2-213ENST00000514949 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
SNX2-213ENST00000514949 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
SNX2-213ENST00000514949 LCE3AQ5TA76 89 aa7.11□□□□□ -1.27
SNX2-213ENST00000514949 MT1BP07438 61 aa7.1□□□□□ -1.27
SNX2-213ENST00000514949 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
SNX2-213ENST00000514949 MT1XP80297 61 aa7.04□□□□□ -1.28
SNX2-213ENST00000514949 KRTAP8-1Q8IUC2 63 aa7.04□□□□□ -1.28
SNX2-213ENST00000514949 KRTAP9-3Q9BYQ3 159 aa7.01□□□□□ -1.29
SNX2-213ENST00000514949 KRTAP10-12P60413 245 aa6.87□□□□□ -1.31
SNX2-213ENST00000514949 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
SNX2-213ENST00000514949 KRTAP12-3P60328 96 aa6.81□□□□□ -1.32
SNX2-213ENST00000514949 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
SNX2-213ENST00000514949 KRTAP10-7P60409 375 aaPredicted RBP6.79□□□□□ -1.32
SNX2-213ENST00000514949 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.33
SNX2-213ENST00000514949 LCE2BO14633 110 aa6.69□□□□□ -1.34
SNX2-213ENST00000514949 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
SNX2-213ENST00000514949 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
SNX2-213ENST00000514949 USH2AO75445 5202 aa6.42□□□□□ -1.38
SNX2-213ENST00000514949 KRTAP4-8A0A0G2JLE6 195 aa6.35□□□□□ -1.39
SNX2-213ENST00000514949 KRTAP4-8Q9BYQ9 185 aa6.35□□□□□ -1.39
SNX2-213ENST00000514949 KMT2DO14686 5537 aa6.31□□□□□ -1.4
SNX2-213ENST00000514949 INE1O15225 51 aa6.31□□□□□ -1.4
SNX2-213ENST00000514949 KRTAP19-7Q3SYF9 63 aa6.29□□□□□ -1.4
SNX2-213ENST00000514949 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
SNX2-213ENST00000514949 LCE2DQ5TA82 110 aaPredicted RBP6.18□□□□□ -1.42
SNX2-213ENST00000514949 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
SNX2-213ENST00000514949 KRTAP9-6A8MVA2 160 aa6.16□□□□□ -1.42
SNX2-213ENST00000514949 MT1EP04732 61 aa6.11□□□□□ -1.43
SNX2-213ENST00000514949 MT1LQ93083 61 aa6.1□□□□□ -1.43
SNX2-213ENST00000514949 KRTAP19-6Q3LI70 58 aa6.08□□□□□ -1.44
SNX2-213ENST00000514949 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
SNX2-213ENST00000514949 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
SNX2-213ENST00000514949 KRTAP9-2Q9BYQ4 174 aa6.01□□□□□ -1.45
SNX2-213ENST00000514949 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms