RNA–Protein interactions for RNA: ENST00000514600.5

LINC00616-205, long intergenic non-protein coding RNA 616, humanhuman

TSL 1 (best) BASIC

Gene LINC00616, Length 2,017 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-205ENST00000514600 DEFB130BP0DP73 79 aa2.64□□□□□ -1.99
LINC00616-205ENST00000514600 DEFB130AP0DP74 79 aa2.64□□□□□ -1.99
LINC00616-205ENST00000514600 SACSQ9NZJ4 4579 aa2.63□□□□□ -1.99
LINC00616-205ENST00000514600 HYDINQ4G0P3 5121 aa2.63□□□□□ -1.99
LINC00616-205ENST00000514600 TENM2Q9NT68 2774 aa2.63□□□□□ -1.99
LINC00616-205ENST00000514600 DNAH9Q9NYC9 4486 aa2.63□□□□□ -1.99
LINC00616-205ENST00000514600 PCLOQ9Y6V0 5065 aa2.62□□□□□ -1.99
LINC00616-205ENST00000514600 DNAH3Q8TD57 4116 aa2.62□□□□□ -1.99
LINC00616-205ENST00000514600 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
LINC00616-205ENST00000514600 H1FX-AS1Q4G0G2 97 aa2.61□□□□□ -1.99
LINC00616-205ENST00000514600 RPL39LQ96EH5 51 aaKnown RBP2.61□□□□□ -1.99
LINC00616-205ENST00000514600 PRO0255Q9UI72 69 aa2.61□□□□□ -1.99
LINC00616-205ENST00000514600 APLNQ9ULZ1 77 aa2.61□□□□□ -1.99
LINC00616-205ENST00000514600 DYNC2H1Q8NCM8 4307 aaKnown RBP2.61□□□□□ -1.99
LINC00616-205ENST00000514600 SPRR1AP35321 89 aa2.6□□□□□ -1.99
LINC00616-205ENST00000514600 IGLV5-48A0A075B6I7 105 aa2.59□□□□□ -2
LINC00616-205ENST00000514600 KRTAP10-5P60370 271 aa2.59□□□□□ -2
LINC00616-205ENST00000514600 KRTAP5-2Q701N4 177 aa2.59□□□□□ -2
LINC00616-205ENST00000514600 CSMD3Q7Z407 3707 aa2.59□□□□□ -2
LINC00616-205ENST00000514600 DNAH1Q9P2D7 4330 aa2.58□□□□□ -2
LINC00616-205ENST00000514600 HERC2O95714 4834 aa2.58□□□□□ -2
LINC00616-205ENST00000514600 RYR1P21817 5038 aa2.58□□□□□ -2
LINC00616-205ENST00000514600 H3BUA1 57 aa2.58□□□□□ -2
LINC00616-205ENST00000514600 LYSTQ99698 3801 aa2.58□□□□□ -2
LINC00616-205ENST00000514600 KRTAP6-3Q3LI67 103 aa2.57□□□□□ -2
LINC00616-205ENST00000514600 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
LINC00616-205ENST00000514600 STARD9Q9P2P6 4700 aa2.56□□□□□ -2
LINC00616-205ENST00000514600 DNAH7Q8WXX0 4024 aa2.55□□□□□ -2
LINC00616-205ENST00000514600 STAB2Q8WWQ8 2551 aa2.55□□□□□ -2
LINC00616-205ENST00000514600 H3BUX3 64 aa2.55□□□□□ -2
LINC00616-205ENST00000514600 M0QY20 66 aa2.55□□□□□ -2
LINC00616-205ENST00000514600 HUWE1Q7Z6Z7 4374 aaKnown RBP2.55□□□□□ -2
LINC00616-205ENST00000514600 KRTAP4-3Q9BYR4 195 aa2.54□□□□□ -2
LINC00616-205ENST00000514600 RHPN1-AS1Q9BWJ2 59 aa2.54□□□□□ -2
LINC00616-205ENST00000514600 FRAS1Q86XX4 4008 aa2.54□□□□□ -2
LINC00616-205ENST00000514600 DEFB105AQ8NG35 78 aa2.53□□□□□ -2
LINC00616-205ENST00000514600 A8MTW9 85 aa2.52□□□□□ -2.01
LINC00616-205ENST00000514600 DEFB1P60022 68 aa2.52□□□□□ -2.01
LINC00616-205ENST00000514600 KIAA1109Q2LD37 5005 aa2.51□□□□□ -2.01
LINC00616-205ENST00000514600 PLECQ15149 4684 aaKnown RBP2.5□□□□□ -2.01
LINC00616-205ENST00000514600 MMP24-AS1A0A0U1RRL7 71 aa2.49□□□□□ -2.01
LINC00616-205ENST00000514600 ABCA13Q86UQ4 5058 aa2.49□□□□□ -2.01
LINC00616-205ENST00000514600 Q5VSD8 79 aa2.49□□□□□ -2.01
LINC00616-205ENST00000514600 SPRR1BP22528 89 aa2.48□□□□□ -2.01
LINC00616-205ENST00000514600 DEFB136Q30KP8 78 aa2.47□□□□□ -2.01
LINC00616-205ENST00000514600 DEFB104AQ8WTQ1 72 aa2.47□□□□□ -2.01
LINC00616-205ENST00000514600 HECTD4Q9Y4D8 3996 aa2.46□□□□□ -2.02
LINC00616-205ENST00000514600 KRTAP12-4P60329 112 aa2.46□□□□□ -2.02
LINC00616-205ENST00000514600 KMT2AQ03164 3969 aa2.46□□□□□ -2.02
LINC00616-205ENST00000514600 DEFB131AP59861 70 aa2.44□□□□□ -2.02
LINC00616-205ENST00000514600 DNAH10Q8IVF4 4471 aa2.44□□□□□ -2.02
LINC00616-205ENST00000514600 KRTAP13-1Q8IUC0 172 aa2.43□□□□□ -2.02
LINC00616-205ENST00000514600 HERC1Q15751 4861 aa2.43□□□□□ -2.02
LINC00616-205ENST00000514600 PKHD1P08F94 4074 aa2.42□□□□□ -2.02
LINC00616-205ENST00000514600 HTN1P15515 57 aa2.41□□□□□ -2.02
LINC00616-205ENST00000514600 PRLHP81277 87 aa2.41□□□□□ -2.02
LINC00616-205ENST00000514600 VPS13DQ5THJ4 4388 aa2.4□□□□□ -2.03
LINC00616-205ENST00000514600 UBR4Q5T4S7 5183 aa2.4□□□□□ -2.03
LINC00616-205ENST00000514600 DYNC1H1Q14204 4646 aaKnown RBP2.39□□□□□ -2.03
LINC00616-205ENST00000514600 DNAH2Q9P225 4427 aa2.38□□□□□ -2.03
LINC00616-205ENST00000514600 A0A0D9SG42 100 aa2.38□□□□□ -2.03
LINC00616-205ENST00000514600 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
LINC00616-205ENST00000514600 NOP10Q9NPE3 64 aaKnown RBP2.38□□□□□ -2.03
LINC00616-205ENST00000514600 HSPG2P98160 4391 aa2.38□□□□□ -2.03
LINC00616-205ENST00000514600 FAT2Q9NYQ8 4349 aa2.38□□□□□ -2.03
LINC00616-205ENST00000514600 S4R3F8 94 aa2.37□□□□□ -2.03
LINC00616-205ENST00000514600 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
LINC00616-205ENST00000514600 DNAH11Q96DT5 4516 aa2.37□□□□□ -2.03
LINC00616-205ENST00000514600 TOMM7Q9P0U1 55 aa2.36□□□□□ -2.03
LINC00616-205ENST00000514600 DNAH6Q9C0G6 4158 aa2.35□□□□□ -2.03
LINC00616-205ENST00000514600 PKD1P98161 4303 aa2.34□□□□□ -2.03
LINC00616-205ENST00000514600 KRTAP5-8O75690 187 aa2.34□□□□□ -2.04
LINC00616-205ENST00000514600 CLPSL2Q6UWE3 100 aa2.34□□□□□ -2.04
LINC00616-205ENST00000514600 DMBT1Q9UGM3 2413 aaPredicted RBP2.33□□□□□ -2.04
LINC00616-205ENST00000514600 DNAH17Q9UFH2 4485 aa2.33□□□□□ -2.04
LINC00616-205ENST00000514600 DEFB135Q30KP9 77 aa2.33□□□□□ -2.04
LINC00616-205ENST00000514600 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
LINC00616-205ENST00000514600 LRP1BQ9NZR2 4599 aa2.32□□□□□ -2.04
LINC00616-205ENST00000514600 SRRM2Q9UQ35 2752 aaKnown RBP2.31□□□□□ -2.04
LINC00616-205ENST00000514600 APOBP04114 4563 aaKnown RBP2.31□□□□□ -2.04
LINC00616-205ENST00000514600 DEFB4AO15263 64 aa2.3□□□□□ -2.04
LINC00616-205ENST00000514600 MYCBP2O75592 4640 aa2.3□□□□□ -2.04
LINC00616-205ENST00000514600 DNAH5Q8TE73 4624 aa2.28□□□□□ -2.04
LINC00616-205ENST00000514600 H3BNG1 76 aa2.27□□□□□ -2.05
LINC00616-205ENST00000514600 FAT1Q14517 4588 aa2.26□□□□□ -2.05
LINC00616-205ENST00000514600 HMCN2Q8NDA2 5059 aa2.26□□□□□ -2.05
LINC00616-205ENST00000514600 A0A096LPF7 62 aa2.26□□□□□ -2.05
LINC00616-205ENST00000514600 SPART-AS1P0CW21 52 aa2.26□□□□□ -2.05
LINC00616-205ENST00000514600 SPINK1P00995 79 aa2.25□□□□□ -2.05
LINC00616-205ENST00000514600 SMR3BP02814 79 aaPredicted RBP2.23□□□□□ -2.05
LINC00616-205ENST00000514600 LINC01556Q5JQF7 62 aa2.23□□□□□ -2.05
LINC00616-205ENST00000514600 RNF213Q63HN8 5207 aa2.22□□□□□ -2.05
LINC00616-205ENST00000514600 HTN3P15516 51 aa2.22□□□□□ -2.05
LINC00616-205ENST00000514600 VPS13BQ7Z7G8 4022 aa2.22□□□□□ -2.05
LINC00616-205ENST00000514600 LRP1Q07954 4544 aaKnown RBP2.18□□□□□ -2.06
LINC00616-205ENST00000514600 KRTAP10-4P60372 401 aaPredicted RBP2.17□□□□□ -2.06
LINC00616-205ENST00000514600 LRP2P98164 4655 aa2.17□□□□□ -2.06
LINC00616-205ENST00000514600 FAT3Q8TDW7 4589 aa2.15□□□□□ -2.07
LINC00616-205ENST00000514600 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
LINC00616-205ENST00000514600 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms