RNA–Protein interactions for RNA: ENST00000513398.1

ACTN3-203, Transcript of actinin alpha 3 (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN3, Length 2,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN3-203ENST00000513398 H0YAA0 97 aa9.71□□□□□ -0.86
ACTN3-203ENST00000513398 BIRC6Q9NR09 4857 aa9.7□□□□□ -0.86
ACTN3-203ENST00000513398 C9orf92A6NGG3 77 aa9.69□□□□□ -0.86
ACTN3-203ENST00000513398 A8MUU9 505 aa9.66□□□□□ -0.86
ACTN3-203ENST00000513398 A0A1B0GU33 70 aa9.62□□□□□ -0.87
ACTN3-203ENST00000513398 KRTAP10-8P60410 259 aa9.62□□□□□ -0.87
ACTN3-203ENST00000513398 MT1HL1P0DM35 61 aa9.59□□□□□ -0.87
ACTN3-203ENST00000513398 H1FX-AS1Q4G0G2 97 aa9.57□□□□□ -0.88
ACTN3-203ENST00000513398 KRTAP3-1Q9BYR8 98 aa9.57□□□□□ -0.88
ACTN3-203ENST00000513398 PCLOQ9Y6V0 5065 aa9.56□□□□□ -0.88
ACTN3-203ENST00000513398 RPS29P62273 56 aaKnown RBP9.55□□□□□ -0.88
ACTN3-203ENST00000513398 KRTAP25-1Q3LHN0 102 aa9.55□□□□□ -0.88
ACTN3-203ENST00000513398 LPAP08519 4548 aa9.54□□□□□ -0.88
ACTN3-203ENST00000513398 H3BS24 57 aa9.54□□□□□ -0.88
ACTN3-203ENST00000513398 C20orf166-AS1Q96NR2 134 aa9.52□□□□□ -0.89
ACTN3-203ENST00000513398 HERC1Q15751 4861 aa9.46□□□□□ -0.89
ACTN3-203ENST00000513398 J3QL48 77 aa9.45□□□□□ -0.9
ACTN3-203ENST00000513398 K7ERS5 55 aa9.42□□□□□ -0.9
ACTN3-203ENST00000513398 LRP2P98164 4655 aa9.42□□□□□ -0.9
ACTN3-203ENST00000513398 CRIPTQ9P021 101 aa9.4□□□□□ -0.9
ACTN3-203ENST00000513398 COX6B2Q6YFQ2 88 aa9.39□□□□□ -0.91
ACTN3-203ENST00000513398 ROMO1P60602 79 aa9.36□□□□□ -0.91
ACTN3-203ENST00000513398 MUC2Q02817 5179 aa9.23□□□□□ -0.93
ACTN3-203ENST00000513398 XP32Q5T750 250 aa9.21□□□□□ -0.94
ACTN3-203ENST00000513398 RPL37P61927 97 aaKnown RBP9.2□□□□□ -0.94
ACTN3-203ENST00000513398 A0A0D9SG42 100 aa9.18□□□□□ -0.94
ACTN3-203ENST00000513398 KRTAP10-6P60371 365 aaPredicted RBP9.17□□□□□ -0.94
ACTN3-203ENST00000513398 KRTAP13-4Q3LI77 160 aa9.15□□□□□ -0.94
ACTN3-203ENST00000513398 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
ACTN3-203ENST00000513398 P0C880 135 aa9.08□□□□□ -0.96
ACTN3-203ENST00000513398 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
ACTN3-203ENST00000513398 TPRXLQ17RH7 258 aa9.05□□□□□ -0.96
ACTN3-203ENST00000513398 S4R3F8 94 aa9.04□□□□□ -0.96
ACTN3-203ENST00000513398 SPINT4Q6UDR6 99 aa9.01□□□□□ -0.97
ACTN3-203ENST00000513398 HMCN2Q8NDA2 5059 aa9□□□□□ -0.97
ACTN3-203ENST00000513398 C10orf95Q9H7T3 257 aa8.99□□□□□ -0.97
ACTN3-203ENST00000513398 RNF213Q63HN8 5207 aa8.98□□□□□ -0.97
ACTN3-203ENST00000513398 UBR4Q5T4S7 5183 aa8.96□□□□□ -0.97
ACTN3-203ENST00000513398 KRTAP12-2P59991 146 aa8.88□□□□□ -0.99
ACTN3-203ENST00000513398 KRTAP4-1Q9BYQ7 146 aa8.84□□□□□ -0.99
ACTN3-203ENST00000513398 KRTAP12-1P59990 96 aa8.79□□□□□ -1
ACTN3-203ENST00000513398 FAT4Q6V0I7 4981 aa8.78□□□□□ -1
ACTN3-203ENST00000513398 KRTAP15-1Q3LI76 137 aa8.76□□□□□ -1.01
ACTN3-203ENST00000513398 SEC61BP60468 96 aaKnown RBP8.74□□□□□ -1.01
ACTN3-203ENST00000513398 MUC17Q685J3 4493 aa8.73□□□□□ -1.01
ACTN3-203ENST00000513398 NDUFAF8A1L188 74 aa8.73□□□□□ -1.01
ACTN3-203ENST00000513398 M0QZ58 72 aa8.65□□□□□ -1.03
ACTN3-203ENST00000513398 R4GN34 69 aa8.43□□□□□ -1.06
ACTN3-203ENST00000513398 KRTAP19-2Q3LHN2 52 aa8.36□□□□□ -1.07
ACTN3-203ENST00000513398 FLGP20930 4061 aaPredicted RBP8.29□□□□□ -1.08
ACTN3-203ENST00000513398 PLAC4Q8WY50 150 aa8.26□□□□□ -1.09
ACTN3-203ENST00000513398 M0R2T5 61 aa8.25□□□□□ -1.09
ACTN3-203ENST00000513398 LORP23490 312 aaPredicted RBP8.25□□□□□ -1.09
ACTN3-203ENST00000513398 LCE2CQ5TA81 110 aa8.24□□□□□ -1.09
ACTN3-203ENST00000513398 MT1HP80294 61 aa8.1□□□□□ -1.11
ACTN3-203ENST00000513398 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
ACTN3-203ENST00000513398 PP632Q6XCG6 107 aa8.03□□□□□ -1.12
ACTN3-203ENST00000513398 LUZP6Q538Z0 58 aa7.99□□□□□ -1.13
ACTN3-203ENST00000513398 KRTAP10-10P60014 251 aa7.84□□□□□ -1.15
ACTN3-203ENST00000513398 MT1FP04733 61 aa7.8□□□□□ -1.16
ACTN3-203ENST00000513398 A0A0A0MQY5 61 aa7.78□□□□□ -1.16
ACTN3-203ENST00000513398 MT2AP02795 61 aa7.78□□□□□ -1.16
ACTN3-203ENST00000513398 KRTAP9-8Q9BYQ0 159 aa7.78□□□□□ -1.16
ACTN3-203ENST00000513398 USH2AO75445 5202 aa7.77□□□□□ -1.17
ACTN3-203ENST00000513398 TNP1P09430 55 aa7.76□□□□□ -1.17
ACTN3-203ENST00000513398 FSIP2Q5CZC0 6907 aa7.76□□□□□ -1.17
ACTN3-203ENST00000513398 LCE2AQ5TA79 106 aaPredicted RBP7.67□□□□□ -1.18
ACTN3-203ENST00000513398 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
ACTN3-203ENST00000513398 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
ACTN3-203ENST00000513398 SPRR5A0A1B0GTR4 108 aa7.58□□□□□ -1.2
ACTN3-203ENST00000513398 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.21
ACTN3-203ENST00000513398 SPRR2GQ9BYE4 73 aa7.46□□□□□ -1.22
ACTN3-203ENST00000513398 LCE2BO14633 110 aa7.38□□□□□ -1.23
ACTN3-203ENST00000513398 LCE3AQ5TA76 89 aa7.32□□□□□ -1.24
ACTN3-203ENST00000513398 MT1BP07438 61 aa7.31□□□□□ -1.24
ACTN3-203ENST00000513398 KMT2DO14686 5537 aa7.21□□□□□ -1.26
ACTN3-203ENST00000513398 KRTAP19-8Q3LI54 63 aa7.21□□□□□ -1.26
ACTN3-203ENST00000513398 SSPOA2VEC9 5147 aa7.2□□□□□ -1.26
ACTN3-203ENST00000513398 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
ACTN3-203ENST00000513398 MT1XP80297 61 aa7.08□□□□□ -1.28
ACTN3-203ENST00000513398 KRTAP10-5P60370 271 aa7.07□□□□□ -1.28
ACTN3-203ENST00000513398 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
ACTN3-203ENST00000513398 KRTAP12-3P60328 96 aa6.95□□□□□ -1.3
ACTN3-203ENST00000513398 INE1O15225 51 aa6.94□□□□□ -1.3
ACTN3-203ENST00000513398 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
ACTN3-203ENST00000513398 KRTAP10-12P60413 245 aa6.92□□□□□ -1.3
ACTN3-203ENST00000513398 FCGBPQ9Y6R7 5405 aaPredicted RBP6.86□□□□□ -1.31
ACTN3-203ENST00000513398 KRTAP9-2Q9BYQ4 174 aa6.84□□□□□ -1.31
ACTN3-203ENST00000513398 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
ACTN3-203ENST00000513398 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
ACTN3-203ENST00000513398 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
ACTN3-203ENST00000513398 MACF1Q9UPN3 7388 aaKnown RBP6.69□□□□□ -1.34
ACTN3-203ENST00000513398 KRTAP19-6Q3LI70 58 aa6.68□□□□□ -1.34
ACTN3-203ENST00000513398 SYNE2Q8WXH0 6885 aaKnown RBP6.67□□□□□ -1.34
ACTN3-203ENST00000513398 MUC12Q9UKN1 5478 aa6.56□□□□□ -1.36
ACTN3-203ENST00000513398 KRTAP19-5Q3LI72 72 aa6.56□□□□□ -1.36
ACTN3-203ENST00000513398 CRCT1Q9UGL9 99 aa6.55□□□□□ -1.36
ACTN3-203ENST00000513398 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
ACTN3-203ENST00000513398 KRTAP9-6A8MVA2 160 aa6.35□□□□□ -1.39
ACTN3-203ENST00000513398 DSTQ03001 7570 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms