RNA–Protein interactions for RNA: ENST00000511049.5

CAST-234, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-234ENST00000511049 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
CAST-234ENST00000511049 Q75L30 129 aa4□□□□□ -1.77
CAST-234ENST00000511049 SPATA8Q6RVD6 105 aa3.98□□□□□ -1.77
CAST-234ENST00000511049 PCLOQ9Y6V0 5065 aa3.97□□□□□ -1.77
CAST-234ENST00000511049 RNF213Q63HN8 5207 aa3.96□□□□□ -1.77
CAST-234ENST00000511049 A0A0D9SG42 100 aa3.96□□□□□ -1.77
CAST-234ENST00000511049 RPL37P61927 97 aaKnown RBP3.95□□□□□ -1.78
CAST-234ENST00000511049 MIR22HGQ0VDD5 57 aa3.95□□□□□ -1.78
CAST-234ENST00000511049 UQCR11O14957 56 aa3.94□□□□□ -1.78
CAST-234ENST00000511049 COX6B2Q6YFQ2 88 aa3.94□□□□□ -1.78
CAST-234ENST00000511049 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
CAST-234ENST00000511049 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
CAST-234ENST00000511049 ADM2Q7Z4H4 148 aa3.9□□□□□ -1.78
CAST-234ENST00000511049 FAT4Q6V0I7 4981 aa3.9□□□□□ -1.78
CAST-234ENST00000511049 CRIPTQ9P021 101 aa3.9□□□□□ -1.79
CAST-234ENST00000511049 A0A1B0GU33 70 aa3.89□□□□□ -1.79
CAST-234ENST00000511049 LINC01554Q52M75 96 aa3.89□□□□□ -1.79
CAST-234ENST00000511049 S4R3F8 94 aa3.89□□□□□ -1.79
CAST-234ENST00000511049 LCE2DQ5TA82 110 aaPredicted RBP3.87□□□□□ -1.79
CAST-234ENST00000511049 UBR4Q5T4S7 5183 aa3.86□□□□□ -1.79
CAST-234ENST00000511049 H0YAA0 97 aa3.85□□□□□ -1.79
CAST-234ENST00000511049 BIRC6Q9NR09 4857 aa3.84□□□□□ -1.79
CAST-234ENST00000511049 P0C880 135 aa3.84□□□□□ -1.79
CAST-234ENST00000511049 RBM12B-AS1Q9P1G2 102 aa3.84□□□□□ -1.79
CAST-234ENST00000511049 TPRXLQ17RH7 258 aa3.82□□□□□ -1.8
CAST-234ENST00000511049 H1FX-AS1Q4G0G2 97 aa3.82□□□□□ -1.8
CAST-234ENST00000511049 KRTAP3-3Q9BYR6 98 aa3.81□□□□□ -1.8
CAST-234ENST00000511049 A6NN06 94 aa3.81□□□□□ -1.8
CAST-234ENST00000511049 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
CAST-234ENST00000511049 KRTAP4-1Q9BYQ7 146 aa3.79□□□□□ -1.8
CAST-234ENST00000511049 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
CAST-234ENST00000511049 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
CAST-234ENST00000511049 CSAG1Q6PB30 78 aa3.77□□□□□ -1.81
CAST-234ENST00000511049 KRTAP3-2Q9BYR7 98 aa3.76□□□□□ -1.81
CAST-234ENST00000511049 SEC61BP60468 96 aaKnown RBP3.76□□□□□ -1.81
CAST-234ENST00000511049 MUC17Q685J3 4493 aa3.75□□□□□ -1.81
CAST-234ENST00000511049 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
CAST-234ENST00000511049 K7ERS5 55 aa3.73□□□□□ -1.81
CAST-234ENST00000511049 M0QZ58 72 aa3.71□□□□□ -1.82
CAST-234ENST00000511049 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
CAST-234ENST00000511049 R4GN34 69 aa3.69□□□□□ -1.82
CAST-234ENST00000511049 M0R2T5 61 aa3.69□□□□□ -1.82
CAST-234ENST00000511049 LORP23490 312 aaPredicted RBP3.68□□□□□ -1.82
CAST-234ENST00000511049 KRTAP12-2P59991 146 aa3.66□□□□□ -1.82
CAST-234ENST00000511049 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.82
CAST-234ENST00000511049 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
CAST-234ENST00000511049 ROMO1P60602 79 aa3.56□□□□□ -1.84
CAST-234ENST00000511049 CAMK2N1Q7Z7J9 78 aa3.55□□□□□ -1.84
CAST-234ENST00000511049 FSIP2Q5CZC0 6907 aa3.54□□□□□ -1.84
CAST-234ENST00000511049 FLGP20930 4061 aaPredicted RBP3.53□□□□□ -1.84
CAST-234ENST00000511049 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
CAST-234ENST00000511049 USH2AO75445 5202 aa3.51□□□□□ -1.85
CAST-234ENST00000511049 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
CAST-234ENST00000511049 KRTAP10-10P60014 251 aa3.46□□□□□ -1.86
CAST-234ENST00000511049 LCE2CQ5TA81 110 aa3.41□□□□□ -1.86
CAST-234ENST00000511049 MT1HP80294 61 aa3.4□□□□□ -1.87
CAST-234ENST00000511049 MT1FP04733 61 aa3.34□□□□□ -1.87
CAST-234ENST00000511049 PLAC4Q8WY50 150 aa3.34□□□□□ -1.87
CAST-234ENST00000511049 KMT2DO14686 5537 aa3.33□□□□□ -1.88
CAST-234ENST00000511049 MT2AP02795 61 aa3.31□□□□□ -1.88
CAST-234ENST00000511049 LCE2BO14633 110 aa3.29□□□□□ -1.88
CAST-234ENST00000511049 KRTAP19-1Q8IUB9 90 aa3.27□□□□□ -1.89
CAST-234ENST00000511049 KRTAP9-8Q9BYQ0 159 aa3.25□□□□□ -1.89
CAST-234ENST00000511049 TNP1P09430 55 aa3.24□□□□□ -1.89
CAST-234ENST00000511049 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
CAST-234ENST00000511049 SPRR2GQ9BYE4 73 aa3.19□□□□□ -1.9
CAST-234ENST00000511049 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
CAST-234ENST00000511049 H3BS24 57 aa3.15□□□□□ -1.9
CAST-234ENST00000511049 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
CAST-234ENST00000511049 LCE2AQ5TA79 106 aaPredicted RBP3.13□□□□□ -1.91
CAST-234ENST00000511049 MT1BP07438 61 aa3.12□□□□□ -1.91
CAST-234ENST00000511049 KRTAP15-1Q3LI76 137 aa3.11□□□□□ -1.91
CAST-234ENST00000511049 KRTAP9-3Q9BYQ3 159 aa3.1□□□□□ -1.91
CAST-234ENST00000511049 KRTAP10-7P60409 375 aaPredicted RBP3.08□□□□□ -1.92
CAST-234ENST00000511049 MT1XP80297 61 aa3.08□□□□□ -1.92
CAST-234ENST00000511049 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
CAST-234ENST00000511049 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
CAST-234ENST00000511049 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
CAST-234ENST00000511049 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
CAST-234ENST00000511049 KRTAP10-12P60413 245 aa3.03□□□□□ -1.92
CAST-234ENST00000511049 KRTAP4-8A0A0G2JLE6 195 aa3.03□□□□□ -1.92
CAST-234ENST00000511049 KRTAP4-8Q9BYQ9 185 aa3.03□□□□□ -1.92
CAST-234ENST00000511049 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
CAST-234ENST00000511049 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
CAST-234ENST00000511049 PRO2289Q9P1D8 64 aa3□□□□□ -1.93
CAST-234ENST00000511049 MUC12Q9UKN1 5478 aa2.98□□□□□ -1.93
CAST-234ENST00000511049 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
CAST-234ENST00000511049 KRTAP9-2Q9BYQ4 174 aa2.93□□□□□ -1.94
CAST-234ENST00000511049 FCGBPQ9Y6R7 5405 aaPredicted RBP2.93□□□□□ -1.94
CAST-234ENST00000511049 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
CAST-234ENST00000511049 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
CAST-234ENST00000511049 KRTAP4-7Q9BYR0 210 aa2.87□□□□□ -1.95
CAST-234ENST00000511049 KRTAP8-1Q8IUC2 63 aa2.86□□□□□ -1.95
CAST-234ENST00000511049 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
CAST-234ENST00000511049 MACF1Q9UPN3 7388 aaKnown RBP2.84□□□□□ -1.95
CAST-234ENST00000511049 KRTAP23-1A1A580 65 aa2.81□□□□□ -1.96
CAST-234ENST00000511049 CRCT1Q9UGL9 99 aa2.81□□□□□ -1.96
CAST-234ENST00000511049 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
CAST-234ENST00000511049 KRTAP19-4Q3LI73 84 aa2.8□□□□□ -1.96
CAST-234ENST00000511049 KRTAP19-6Q3LI70 58 aa2.78□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms