RNA–Protein interactions for RNA: ENST00000509507.5

CALCOCO2-215, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-215ENST00000509507 CIRBP-AS1Q8TBR5 109 aa5.17□□□□□ -1.58
CALCOCO2-215ENST00000509507 SPACA4Q8TDM5 124 aa5.13□□□□□ -1.59
CALCOCO2-215ENST00000509507 IGKV2D-30A0A075B6S6 120 aa5.13□□□□□ -1.59
CALCOCO2-215ENST00000509507 XP32Q5T750 250 aa5.13□□□□□ -1.59
CALCOCO2-215ENST00000509507 LRP1Q07954 4544 aaKnown RBP5.12□□□□□ -1.59
CALCOCO2-215ENST00000509507 HERC1Q15751 4861 aa5.12□□□□□ -1.59
CALCOCO2-215ENST00000509507 FAT3Q8TDW7 4589 aa5.12□□□□□ -1.59
CALCOCO2-215ENST00000509507 FLG2Q5D862 2391 aaPredicted RBP5.1□□□□□ -1.59
CALCOCO2-215ENST00000509507 KRTAP10-4P60372 401 aaPredicted RBP5.07□□□□□ -1.6
CALCOCO2-215ENST00000509507 LINC00304Q8N9R0 145 aa5.07□□□□□ -1.6
CALCOCO2-215ENST00000509507 DMBT1Q9UGM3 2413 aaPredicted RBP5.07□□□□□ -1.6
CALCOCO2-215ENST00000509507 SSBP3-AS1Q7Z2R9 100 aa5.06□□□□□ -1.6
CALCOCO2-215ENST00000509507 ANAPC11Q9NYG5 84 aa5.06□□□□□ -1.6
CALCOCO2-215ENST00000509507 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
CALCOCO2-215ENST00000509507 SPINK6Q6UWN8 80 aa5.04□□□□□ -1.6
CALCOCO2-215ENST00000509507 KRTAP4-8A0A0G2JLE6 195 aa5.03□□□□□ -1.6
CALCOCO2-215ENST00000509507 H0YAA0 97 aa5.03□□□□□ -1.6
CALCOCO2-215ENST00000509507 LCE2CQ5TA81 110 aa5.03□□□□□ -1.6
CALCOCO2-215ENST00000509507 K7ERS5 55 aa5.02□□□□□ -1.61
CALCOCO2-215ENST00000509507 KRTAP16-1A8MUX0 517 aa5.02□□□□□ -1.61
CALCOCO2-215ENST00000509507 TNXBP22105 4242 aa5.01□□□□□ -1.61
CALCOCO2-215ENST00000509507 P0C880 135 aa5□□□□□ -1.61
CALCOCO2-215ENST00000509507 A0A1B0GU33 70 aa4.98□□□□□ -1.61
CALCOCO2-215ENST00000509507 PSORS1C2Q9UIG4 136 aa4.98□□□□□ -1.61
CALCOCO2-215ENST00000509507 H1FX-AS1Q4G0G2 97 aa4.97□□□□□ -1.61
CALCOCO2-215ENST00000509507 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
CALCOCO2-215ENST00000509507 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
CALCOCO2-215ENST00000509507 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
CALCOCO2-215ENST00000509507 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
CALCOCO2-215ENST00000509507 SPINK1P00995 79 aa4.9□□□□□ -1.63
CALCOCO2-215ENST00000509507 MT1HL1P0DM35 61 aa4.9□□□□□ -1.63
CALCOCO2-215ENST00000509507 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.63
CALCOCO2-215ENST00000509507 C20orf166-AS1Q96NR2 134 aa4.87□□□□□ -1.63
CALCOCO2-215ENST00000509507 TYMSOSQ8TAI1 123 aa4.87□□□□□ -1.63
CALCOCO2-215ENST00000509507 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
CALCOCO2-215ENST00000509507 COX6B2Q6YFQ2 88 aa4.86□□□□□ -1.63
CALCOCO2-215ENST00000509507 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
CALCOCO2-215ENST00000509507 KRTAP1-4P0C5Y4 121 aa4.83□□□□□ -1.64
CALCOCO2-215ENST00000509507 KRTAP10-8P60410 259 aa4.83□□□□□ -1.64
CALCOCO2-215ENST00000509507 KRTAP4-12Q9BQ66 201 aa4.83□□□□□ -1.64
CALCOCO2-215ENST00000509507 LRP2P98164 4655 aa4.81□□□□□ -1.64
CALCOCO2-215ENST00000509507 RPL37P61927 97 aaKnown RBP4.81□□□□□ -1.64
CALCOCO2-215ENST00000509507 NDUFAF8A1L188 74 aa4.79□□□□□ -1.64
CALCOCO2-215ENST00000509507 LPAP08519 4548 aa4.78□□□□□ -1.64
CALCOCO2-215ENST00000509507 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
CALCOCO2-215ENST00000509507 KRTAP13-2Q52LG2 175 aa4.78□□□□□ -1.64
CALCOCO2-215ENST00000509507 RPS29P62273 56 aaKnown RBP4.77□□□□□ -1.65
CALCOCO2-215ENST00000509507 TPRXLQ17RH7 258 aa4.77□□□□□ -1.65
CALCOCO2-215ENST00000509507 CRIPTQ9P021 101 aa4.77□□□□□ -1.65
CALCOCO2-215ENST00000509507 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
CALCOCO2-215ENST00000509507 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
CALCOCO2-215ENST00000509507 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
CALCOCO2-215ENST00000509507 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
CALCOCO2-215ENST00000509507 RNF213Q63HN8 5207 aa4.67□□□□□ -1.66
CALCOCO2-215ENST00000509507 KRTAP10-6P60371 365 aaPredicted RBP4.64□□□□□ -1.67
CALCOCO2-215ENST00000509507 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
CALCOCO2-215ENST00000509507 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
CALCOCO2-215ENST00000509507 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
CALCOCO2-215ENST00000509507 C10orf95Q9H7T3 257 aa4.6□□□□□ -1.67
CALCOCO2-215ENST00000509507 S4R3F8 94 aa4.6□□□□□ -1.67
CALCOCO2-215ENST00000509507 MUC2Q02817 5179 aa4.6□□□□□ -1.67
CALCOCO2-215ENST00000509507 KRTAP13-4Q3LI77 160 aa4.58□□□□□ -1.68
CALCOCO2-215ENST00000509507 A0A0D9SG42 100 aa4.54□□□□□ -1.68
CALCOCO2-215ENST00000509507 MUC17Q685J3 4493 aa4.54□□□□□ -1.68
CALCOCO2-215ENST00000509507 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
CALCOCO2-215ENST00000509507 KRTAP12-1P59990 96 aa4.49□□□□□ -1.69
CALCOCO2-215ENST00000509507 KRTAP12-2P59991 146 aa4.49□□□□□ -1.69
CALCOCO2-215ENST00000509507 C9orf92A6NGG3 77 aa4.46□□□□□ -1.69
CALCOCO2-215ENST00000509507 M0QZ58 72 aa4.46□□□□□ -1.7
CALCOCO2-215ENST00000509507 SEC61BP60468 96 aaKnown RBP4.42□□□□□ -1.7
CALCOCO2-215ENST00000509507 PLAC4Q8WY50 150 aa4.42□□□□□ -1.7
CALCOCO2-215ENST00000509507 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
CALCOCO2-215ENST00000509507 FAT4Q6V0I7 4981 aa4.41□□□□□ -1.7
CALCOCO2-215ENST00000509507 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
CALCOCO2-215ENST00000509507 KRTAP4-1Q9BYQ7 146 aa4.36□□□□□ -1.71
CALCOCO2-215ENST00000509507 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
CALCOCO2-215ENST00000509507 KRTAP9-7A8MTY7 169 aa4.33□□□□□ -1.72
CALCOCO2-215ENST00000509507 FSIP2Q5CZC0 6907 aa4.31□□□□□ -1.72
CALCOCO2-215ENST00000509507 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
CALCOCO2-215ENST00000509507 CAMK2N1Q7Z7J9 78 aa4.26□□□□□ -1.73
CALCOCO2-215ENST00000509507 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
CALCOCO2-215ENST00000509507 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
CALCOCO2-215ENST00000509507 MT1HP80294 61 aa4.17□□□□□ -1.74
CALCOCO2-215ENST00000509507 SPRR5A0A1B0GTR4 108 aa4.16□□□□□ -1.74
CALCOCO2-215ENST00000509507 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
CALCOCO2-215ENST00000509507 R4GN34 69 aa4.14□□□□□ -1.75
CALCOCO2-215ENST00000509507 M0R2T5 61 aa4.11□□□□□ -1.75
CALCOCO2-215ENST00000509507 INE1O15225 51 aa4.05□□□□□ -1.76
CALCOCO2-215ENST00000509507 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
CALCOCO2-215ENST00000509507 TNP1P09430 55 aa3.95□□□□□ -1.78
CALCOCO2-215ENST00000509507 MT2AP02795 61 aa3.9□□□□□ -1.78
CALCOCO2-215ENST00000509507 MT1FP04733 61 aa3.89□□□□□ -1.79
CALCOCO2-215ENST00000509507 KRTAP10-10P60014 251 aa3.87□□□□□ -1.79
CALCOCO2-215ENST00000509507 USH2AO75445 5202 aa3.86□□□□□ -1.79
CALCOCO2-215ENST00000509507 LCE5AQ5TCM9 118 aa3.85□□□□□ -1.79
CALCOCO2-215ENST00000509507 KRTAP9-3Q9BYQ3 159 aa3.81□□□□□ -1.8
CALCOCO2-215ENST00000509507 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
CALCOCO2-215ENST00000509507 SSPOA2VEC9 5147 aa3.8□□□□□ -1.8
CALCOCO2-215ENST00000509507 SYNE2Q8WXH0 6885 aaKnown RBP3.75□□□□□ -1.81
CALCOCO2-215ENST00000509507 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms