RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 SERF2P84101 59 aa0.25□□□□□ -2.37
XRCC4-204ENST00000509268 LINC00308Q8TCZ7 52 aa0.25□□□□□ -2.37
XRCC4-204ENST00000509268 ATP7AQ04656 1500 aa0.25□□□□□ -2.37
XRCC4-204ENST00000509268 LAMA1P25391 3075 aa0.25□□□□□ -2.37
XRCC4-204ENST00000509268 HTTP42858 3142 aa0.25□□□□□ -2.37
XRCC4-204ENST00000509268 FAT3Q8TDW7 4589 aa0.25□□□□□ -2.37
XRCC4-204ENST00000509268 WDR87Q6ZQQ6 2873 aa0.24□□□□□ -2.37
XRCC4-204ENST00000509268 HRNRQ86YZ3 2850 aaPredicted RBP0.24□□□□□ -2.37
XRCC4-204ENST00000509268 NBASA2RRP1 2371 aa0.24□□□□□ -2.37
XRCC4-204ENST00000509268 M0R2T5 61 aa0.24□□□□□ -2.37
XRCC4-204ENST00000509268 MROH2BQ7Z745 1585 aa0.24□□□□□ -2.37
XRCC4-204ENST00000509268 DMXL1Q9Y485 3027 aa0.24□□□□□ -2.37
XRCC4-204ENST00000509268 TACC2O95359 2948 aa0.24□□□□□ -2.37
XRCC4-204ENST00000509268 USP34Q70CQ2 3546 aa0.24□□□□□ -2.37
XRCC4-204ENST00000509268 CUBNO60494 3623 aa0.24□□□□□ -2.37
XRCC4-204ENST00000509268 SAMD9LQ8IVG5 1584 aa0.24□□□□□ -2.37
XRCC4-204ENST00000509268 DMXL2Q8TDJ6 3036 aa0.24□□□□□ -2.37
XRCC4-204ENST00000509268 H0YGX0 51 aa0.23□□□□□ -2.37
XRCC4-204ENST00000509268 DEFB135Q30KP9 77 aa0.23□□□□□ -2.37
XRCC4-204ENST00000509268 C6orf48Q9UBA6 75 aa0.23□□□□□ -2.37
XRCC4-204ENST00000509268 MAP1AP78559 2803 aaPredicted RBP0.23□□□□□ -2.37
XRCC4-204ENST00000509268 NBPF19A0A087WUL8 3843 aa0.23□□□□□ -2.37
XRCC4-204ENST00000509268 HUWE1Q7Z6Z7 4374 aaKnown RBP0.23□□□□□ -2.37
XRCC4-204ENST00000509268 CENPFP49454 3210 aa0.23□□□□□ -2.37
XRCC4-204ENST00000509268 WT1-ASQ06250 92 aa0.23□□□□□ -2.37
XRCC4-204ENST00000509268 BRCA2P51587 3418 aa0.23□□□□□ -2.37
XRCC4-204ENST00000509268 DUOX1Q9NRD9 1551 aa0.22□□□□□ -2.37
XRCC4-204ENST00000509268 S4R3F8 94 aa0.22□□□□□ -2.37
XRCC4-204ENST00000509268 ATMQ13315 3056 aa0.22□□□□□ -2.37
XRCC4-204ENST00000509268 KMT2AQ03164 3969 aa0.22□□□□□ -2.37
XRCC4-204ENST00000509268 LOC400499M0QZD8 3231 aa0.22□□□□□ -2.37
XRCC4-204ENST00000509268 APC2O95996 2303 aa0.22□□□□□ -2.37
XRCC4-204ENST00000509268 MUC3AQ02505 3323 aa0.22□□□□□ -2.37
XRCC4-204ENST00000509268 LAMA5O15230 3695 aa0.21□□□□□ -2.38
XRCC4-204ENST00000509268 ADGRG4Q8IZF6 3080 aa0.21□□□□□ -2.38
XRCC4-204ENST00000509268 SNRPGP62308 76 aaKnown RBP0.21□□□□□ -2.38
XRCC4-204ENST00000509268 KRTAP19-6Q3LI70 58 aa0.21□□□□□ -2.38
XRCC4-204ENST00000509268 TMEM167BQ9NRX6 74 aa0.21□□□□□ -2.38
XRCC4-204ENST00000509268 KAAG1Q9UBP8 84 aa0.21□□□□□ -2.38
XRCC4-204ENST00000509268 TRIOO75962 3097 aa0.21□□□□□ -2.38
XRCC4-204ENST00000509268 HSPG2P98160 4391 aa0.21□□□□□ -2.38
XRCC4-204ENST00000509268 CLTCL1P53675 1640 aa0.2□□□□□ -2.38
XRCC4-204ENST00000509268 NDUFA1O15239 70 aa0.2□□□□□ -2.38
XRCC4-204ENST00000509268 SPRR2DP22532 72 aa0.2□□□□□ -2.38
XRCC4-204ENST00000509268 WFDC10BQ8IUB3 73 aa0.2□□□□□ -2.38
XRCC4-204ENST00000509268 SMIM2Q9BVW6 85 aa0.2□□□□□ -2.38
XRCC4-204ENST00000509268 SVEP1Q4LDE5 3571 aa0.2□□□□□ -2.38
XRCC4-204ENST00000509268 DNAH11Q96DT5 4516 aa0.2□□□□□ -2.38
XRCC4-204ENST00000509268 FREM2Q5SZK8 3169 aa0.2□□□□□ -2.38
XRCC4-204ENST00000509268 MMP24-AS1A0A0U1RRL7 71 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 PRLHP81277 87 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 MYCBP2O75592 4640 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 FRYLO94915 3013 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 PKHD1L1Q86WI1 4243 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 HECTD4Q9Y4D8 3996 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 CENPEQ02224 2701 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 DNAH8Q96JB1 4490 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 VPS13AQ96RL7 3174 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 ASPMQ8IZT6 3477 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 ACACAQ13085 2346 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 IGLV5-48A0A075B6I7 105 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 H0YGG7 62 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 DEFB106AQ8N104 65 aa0.19□□□□□ -2.38
XRCC4-204ENST00000509268 GCC2Q8IWJ2 1684 aa0.18□□□□□ -2.38
XRCC4-204ENST00000509268 MUC12Q9UKN1 5478 aa0.18□□□□□ -2.38
XRCC4-204ENST00000509268 VPS13BQ7Z7G8 4022 aa0.18□□□□□ -2.38
XRCC4-204ENST00000509268 VPS13DQ5THJ4 4388 aa0.18□□□□□ -2.38
XRCC4-204ENST00000509268 PRUNE2Q8WUY3 3088 aa0.18□□□□□ -2.38
XRCC4-204ENST00000509268 RPL39P62891 51 aaKnown RBP0.18□□□□□ -2.38
XRCC4-204ENST00000509268 LPAP08519 4548 aa0.17□□□□□ -2.38
XRCC4-204ENST00000509268 A8MTW9 85 aa0.17□□□□□ -2.38
XRCC4-204ENST00000509268 CLPSL2Q6UWE3 100 aa0.17□□□□□ -2.38
XRCC4-204ENST00000509268 SMG1Q96Q15 3661 aaKnown RBP0.17□□□□□ -2.38
XRCC4-204ENST00000509268 XIRP2A4UGR9 3374 aa0.17□□□□□ -2.38
XRCC4-204ENST00000509268 CSMD2Q7Z408 3487 aa0.17□□□□□ -2.38
XRCC4-204ENST00000509268 AKAP9Q99996 3911 aa0.16□□□□□ -2.38
XRCC4-204ENST00000509268 PKD1P98161 4303 aa0.16□□□□□ -2.38
XRCC4-204ENST00000509268 POLR2KP53803 58 aaKnown RBP0.16□□□□□ -2.38
XRCC4-204ENST00000509268 LEAP2Q969E1 77 aa0.16□□□□□ -2.38
XRCC4-204ENST00000509268 RPL39LQ96EH5 51 aaKnown RBP0.16□□□□□ -2.38
XRCC4-204ENST00000509268 SACSQ9NZJ4 4579 aa0.16□□□□□ -2.38
XRCC4-204ENST00000509268 SPRR2BP35325 72 aa0.15□□□□□ -2.38
XRCC4-204ENST00000509268 FLGP20930 4061 aaPredicted RBP0.15□□□□□ -2.39
XRCC4-204ENST00000509268 H3BUA1 57 aa0.15□□□□□ -2.39
XRCC4-204ENST00000509268 DEFB104AQ8WTQ1 72 aa0.15□□□□□ -2.39
XRCC4-204ENST00000509268 DYNC2H1Q8NCM8 4307 aaKnown RBP0.15□□□□□ -2.39
XRCC4-204ENST00000509268 DNAH2Q9P225 4427 aa0.14□□□□□ -2.39
XRCC4-204ENST00000509268 DMDP11532 3685 aa0.14□□□□□ -2.39
XRCC4-204ENST00000509268 SPRR2EP22531 72 aa0.14□□□□□ -2.39
XRCC4-204ENST00000509268 SPRR2AP35326 72 aa0.14□□□□□ -2.39
XRCC4-204ENST00000509268 MT4P47944 62 aa0.14□□□□□ -2.39
XRCC4-204ENST00000509268 ARHGAP5-AS1Q96IT6 56 aa0.14□□□□□ -2.39
XRCC4-204ENST00000509268 TTTY10Q9BZA0 68 aa0.14□□□□□ -2.39
XRCC4-204ENST00000509268 ANK3Q12955 4377 aaKnown RBP0.14□□□□□ -2.39
XRCC4-204ENST00000509268 DNAH3Q8TD57 4116 aa0.13□□□□□ -2.39
XRCC4-204ENST00000509268 APOBP04114 4563 aaKnown RBP0.13□□□□□ -2.39
XRCC4-204ENST00000509268 DEFB131AP59861 70 aa0.13□□□□□ -2.39
XRCC4-204ENST00000509268 KRTAP6-2Q3LI66 62 aa0.13□□□□□ -2.39
XRCC4-204ENST00000509268 FAT1Q14517 4588 aa0.13□□□□□ -2.39
XRCC4-204ENST00000509268 H3BSH0 61 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms