RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 XP32Q5T750 250 aa5.05□□□□□ -1.6
SEC31A-227ENST00000508502 CSAG1Q6PB30 78 aa5.04□□□□□ -1.6
SEC31A-227ENST00000508502 MYCBP2O75592 4640 aa5.01□□□□□ -1.61
SEC31A-227ENST00000508502 KRTAP17-1Q9BYP8 105 aa5.01□□□□□ -1.61
SEC31A-227ENST00000508502 KRTAP3-3Q9BYR6 98 aa5.01□□□□□ -1.61
SEC31A-227ENST00000508502 RYR1P21817 5038 aa5□□□□□ -1.61
SEC31A-227ENST00000508502 LINC01554Q52M75 96 aa5□□□□□ -1.61
SEC31A-227ENST00000508502 RYR3Q15413 4870 aa4.98□□□□□ -1.61
SEC31A-227ENST00000508502 S4R3F8 94 aa4.98□□□□□ -1.61
SEC31A-227ENST00000508502 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
SEC31A-227ENST00000508502 K7ERS5 55 aa4.96□□□□□ -1.61
SEC31A-227ENST00000508502 MT1HL1P0DM35 61 aa4.96□□□□□ -1.61
SEC31A-227ENST00000508502 KIAA1109Q2LD37 5005 aa4.95□□□□□ -1.62
SEC31A-227ENST00000508502 KRTAP3-2Q9BYR7 98 aa4.93□□□□□ -1.62
SEC31A-227ENST00000508502 KRTAP13-4Q3LI77 160 aa4.92□□□□□ -1.62
SEC31A-227ENST00000508502 A0A0D9SG42 100 aa4.91□□□□□ -1.62
SEC31A-227ENST00000508502 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
SEC31A-227ENST00000508502 P0C880 135 aa4.89□□□□□ -1.63
SEC31A-227ENST00000508502 CRIPTQ9P021 101 aa4.87□□□□□ -1.63
SEC31A-227ENST00000508502 LPAP08519 4548 aa4.86□□□□□ -1.63
SEC31A-227ENST00000508502 TPRXLQ17RH7 258 aa4.85□□□□□ -1.63
SEC31A-227ENST00000508502 LRP2P98164 4655 aa4.85□□□□□ -1.63
SEC31A-227ENST00000508502 ROMO1P60602 79 aa4.84□□□□□ -1.63
SEC31A-227ENST00000508502 EPPK1P58107 5090 aaKnown RBP4.81□□□□□ -1.64
SEC31A-227ENST00000508502 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
SEC31A-227ENST00000508502 KRTAP12-2P59991 146 aa4.76□□□□□ -1.65
SEC31A-227ENST00000508502 ABCA13Q86UQ4 5058 aa4.76□□□□□ -1.65
SEC31A-227ENST00000508502 SPINT4Q6UDR6 99 aa4.74□□□□□ -1.65
SEC31A-227ENST00000508502 KRTAP12-1P59990 96 aa4.73□□□□□ -1.65
SEC31A-227ENST00000508502 M0QZ58 72 aa4.71□□□□□ -1.65
SEC31A-227ENST00000508502 C10orf95Q9H7T3 257 aa4.69□□□□□ -1.66
SEC31A-227ENST00000508502 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
SEC31A-227ENST00000508502 J3QL48 77 aa4.64□□□□□ -1.67
SEC31A-227ENST00000508502 KRTAP4-1Q9BYQ7 146 aa4.63□□□□□ -1.67
SEC31A-227ENST00000508502 R4GN34 69 aa4.63□□□□□ -1.67
SEC31A-227ENST00000508502 MUC17Q685J3 4493 aa4.62□□□□□ -1.67
SEC31A-227ENST00000508502 LORP23490 312 aaPredicted RBP4.57□□□□□ -1.68
SEC31A-227ENST00000508502 HERC2O95714 4834 aa4.55□□□□□ -1.68
SEC31A-227ENST00000508502 H3BS24 57 aa4.52□□□□□ -1.69
SEC31A-227ENST00000508502 KRTAP19-2Q3LHN2 52 aa4.52□□□□□ -1.69
SEC31A-227ENST00000508502 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
SEC31A-227ENST00000508502 MUC2Q02817 5179 aa4.45□□□□□ -1.7
SEC31A-227ENST00000508502 BIRC6Q9NR09 4857 aa4.41□□□□□ -1.7
SEC31A-227ENST00000508502 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
SEC31A-227ENST00000508502 FLGP20930 4061 aaPredicted RBP4.38□□□□□ -1.71
SEC31A-227ENST00000508502 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
SEC31A-227ENST00000508502 HERC1Q15751 4861 aa4.34□□□□□ -1.72
SEC31A-227ENST00000508502 HMCN2Q8NDA2 5059 aa4.3□□□□□ -1.72
SEC31A-227ENST00000508502 PCLOQ9Y6V0 5065 aa4.29□□□□□ -1.72
SEC31A-227ENST00000508502 PLAC4Q8WY50 150 aa4.29□□□□□ -1.72
SEC31A-227ENST00000508502 PP632Q6XCG6 107 aa4.28□□□□□ -1.72
SEC31A-227ENST00000508502 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
SEC31A-227ENST00000508502 FAT4Q6V0I7 4981 aa4.24□□□□□ -1.73
SEC31A-227ENST00000508502 TNP1P09430 55 aa4.22□□□□□ -1.73
SEC31A-227ENST00000508502 M0R2T5 61 aa4.21□□□□□ -1.74
SEC31A-227ENST00000508502 SPRR2GQ9BYE4 73 aa4.17□□□□□ -1.74
SEC31A-227ENST00000508502 KRTAP19-1Q8IUB9 90 aa4.16□□□□□ -1.74
SEC31A-227ENST00000508502 MT1HP80294 61 aa4.15□□□□□ -1.74
SEC31A-227ENST00000508502 RNF213Q63HN8 5207 aa4.13□□□□□ -1.75
SEC31A-227ENST00000508502 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
SEC31A-227ENST00000508502 UBR4Q5T4S7 5183 aa4.11□□□□□ -1.75
SEC31A-227ENST00000508502 KRTAP10-10P60014 251 aa4.1□□□□□ -1.75
SEC31A-227ENST00000508502 MT1FP04733 61 aa4.09□□□□□ -1.75
SEC31A-227ENST00000508502 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
SEC31A-227ENST00000508502 MT2AP02795 61 aa4.09□□□□□ -1.76
SEC31A-227ENST00000508502 KRTAP9-8Q9BYQ0 159 aa4.06□□□□□ -1.76
SEC31A-227ENST00000508502 LCE3AQ5TA76 89 aa4□□□□□ -1.77
SEC31A-227ENST00000508502 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
SEC31A-227ENST00000508502 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
SEC31A-227ENST00000508502 MT1BP07438 61 aa3.95□□□□□ -1.78
SEC31A-227ENST00000508502 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
SEC31A-227ENST00000508502 MT1XP80297 61 aa3.92□□□□□ -1.78
SEC31A-227ENST00000508502 KRTAP8-1Q8IUC2 63 aa3.88□□□□□ -1.79
SEC31A-227ENST00000508502 KRTAP9-3Q9BYQ3 159 aa3.88□□□□□ -1.79
SEC31A-227ENST00000508502 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
SEC31A-227ENST00000508502 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
SEC31A-227ENST00000508502 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
SEC31A-227ENST00000508502 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
SEC31A-227ENST00000508502 LCE2DQ5TA82 110 aaPredicted RBP3.79□□□□□ -1.8
SEC31A-227ENST00000508502 PRO2289Q9P1D8 64 aa3.78□□□□□ -1.8
SEC31A-227ENST00000508502 LCE2BO14633 110 aa3.74□□□□□ -1.81
SEC31A-227ENST00000508502 USH2AO75445 5202 aa3.67□□□□□ -1.82
SEC31A-227ENST00000508502 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
SEC31A-227ENST00000508502 LCE2AQ5TA79 106 aaPredicted RBP3.66□□□□□ -1.82
SEC31A-227ENST00000508502 KMT2DO14686 5537 aa3.61□□□□□ -1.83
SEC31A-227ENST00000508502 KRTAP4-8A0A0G2JLE6 195 aa3.59□□□□□ -1.83
SEC31A-227ENST00000508502 KRTAP4-8Q9BYQ9 185 aa3.59□□□□□ -1.83
SEC31A-227ENST00000508502 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
SEC31A-227ENST00000508502 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
SEC31A-227ENST00000508502 INE1O15225 51 aa3.48□□□□□ -1.85
SEC31A-227ENST00000508502 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
SEC31A-227ENST00000508502 KRTAP4-7Q9BYR0 210 aa3.44□□□□□ -1.86
SEC31A-227ENST00000508502 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
SEC31A-227ENST00000508502 MT1EP04732 61 aa3.39□□□□□ -1.87
SEC31A-227ENST00000508502 MT1LQ93083 61 aa3.39□□□□□ -1.87
SEC31A-227ENST00000508502 KRTAP19-4Q3LI73 84 aa3.35□□□□□ -1.87
SEC31A-227ENST00000508502 KRTAP19-6Q3LI70 58 aa3.34□□□□□ -1.87
SEC31A-227ENST00000508502 FSIP2Q5CZC0 6907 aa3.32□□□□□ -1.88
SEC31A-227ENST00000508502 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
SEC31A-227ENST00000508502 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms