RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 H1FX-AS1Q4G0G2 97 aa3.4□□□□□ -1.86
KDM3B-204ENST00000507996 KIAA1109Q2LD37 5005 aa3.39□□□□□ -1.87
KDM3B-204ENST00000507996 A0A1B0GU33 70 aa3.39□□□□□ -1.87
KDM3B-204ENST00000507996 RYR1P21817 5038 aa3.38□□□□□ -1.87
KDM3B-204ENST00000507996 Q5VSD8 79 aa3.38□□□□□ -1.87
KDM3B-204ENST00000507996 K7ERS5 55 aa3.37□□□□□ -1.87
KDM3B-204ENST00000507996 KRTAP17-1Q9BYP8 105 aa3.37□□□□□ -1.87
KDM3B-204ENST00000507996 BIRC6Q9NR09 4857 aa3.37□□□□□ -1.87
KDM3B-204ENST00000507996 HSPG2P98160 4391 aa3.36□□□□□ -1.87
KDM3B-204ENST00000507996 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
KDM3B-204ENST00000507996 SPINK1P00995 79 aa3.36□□□□□ -1.87
KDM3B-204ENST00000507996 SSBP3-AS1Q7Z2R9 100 aa3.36□□□□□ -1.87
KDM3B-204ENST00000507996 TYMSOSQ8TAI1 123 aa3.35□□□□□ -1.87
KDM3B-204ENST00000507996 CRIPTQ9P021 101 aa3.35□□□□□ -1.87
KDM3B-204ENST00000507996 KRTAP1-4P0C5Y4 121 aa3.34□□□□□ -1.87
KDM3B-204ENST00000507996 SPINT4Q6UDR6 99 aa3.34□□□□□ -1.87
KDM3B-204ENST00000507996 KRTAP10-4P60372 401 aaPredicted RBP3.34□□□□□ -1.88
KDM3B-204ENST00000507996 TPRXLQ17RH7 258 aa3.34□□□□□ -1.88
KDM3B-204ENST00000507996 KRTAP13-2Q52LG2 175 aa3.34□□□□□ -1.88
KDM3B-204ENST00000507996 Q8N1X5 172 aa3.31□□□□□ -1.88
KDM3B-204ENST00000507996 COX6B2Q6YFQ2 88 aa3.3□□□□□ -1.88
KDM3B-204ENST00000507996 LRP1Q07954 4544 aaKnown RBP3.29□□□□□ -1.88
KDM3B-204ENST00000507996 HERC2O95714 4834 aa3.29□□□□□ -1.88
KDM3B-204ENST00000507996 KRTAP4-5Q9BYR2 181 aa3.29□□□□□ -1.88
KDM3B-204ENST00000507996 ABCA13Q86UQ4 5058 aa3.28□□□□□ -1.88
KDM3B-204ENST00000507996 RPL37P61927 97 aaKnown RBP3.27□□□□□ -1.89
KDM3B-204ENST00000507996 PKHD1L1Q86WI1 4243 aa3.27□□□□□ -1.89
KDM3B-204ENST00000507996 MYCBP2O75592 4640 aa3.26□□□□□ -1.89
KDM3B-204ENST00000507996 KRTAP3-1Q9BYR8 98 aa3.25□□□□□ -1.89
KDM3B-204ENST00000507996 XP32Q5T750 250 aa3.24□□□□□ -1.89
KDM3B-204ENST00000507996 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
KDM3B-204ENST00000507996 FAT3Q8TDW7 4589 aa3.23□□□□□ -1.89
KDM3B-204ENST00000507996 KRTAP10-8P60410 259 aa3.22□□□□□ -1.89
KDM3B-204ENST00000507996 PCLOQ9Y6V0 5065 aa3.22□□□□□ -1.89
KDM3B-204ENST00000507996 TNXBP22105 4242 aa3.2□□□□□ -1.9
KDM3B-204ENST00000507996 MT1HL1P0DM35 61 aa3.19□□□□□ -1.9
KDM3B-204ENST00000507996 KRTAP10-6P60371 365 aaPredicted RBP3.19□□□□□ -1.9
KDM3B-204ENST00000507996 C10orf95Q9H7T3 257 aa3.19□□□□□ -1.9
KDM3B-204ENST00000507996 C9orf92A6NGG3 77 aa3.19□□□□□ -1.9
KDM3B-204ENST00000507996 RPS29P62273 56 aaKnown RBP3.17□□□□□ -1.9
KDM3B-204ENST00000507996 KRTAP19-4Q3LI73 84 aa3.17□□□□□ -1.9
KDM3B-204ENST00000507996 KRTAP13-4Q3LI77 160 aa3.17□□□□□ -1.9
KDM3B-204ENST00000507996 S4R3F8 94 aa3.14□□□□□ -1.91
KDM3B-204ENST00000507996 A0A0D9SG42 100 aa3.11□□□□□ -1.91
KDM3B-204ENST00000507996 LPAP08519 4548 aa3.09□□□□□ -1.91
KDM3B-204ENST00000507996 KRTAP12-2P59991 146 aa3.09□□□□□ -1.91
KDM3B-204ENST00000507996 HERC1Q15751 4861 aa3.09□□□□□ -1.91
KDM3B-204ENST00000507996 KRTAP12-1P59990 96 aa3.08□□□□□ -1.92
KDM3B-204ENST00000507996 PLAC4Q8WY50 150 aa3.05□□□□□ -1.92
KDM3B-204ENST00000507996 LOC100996750A0A140TA64 210 aa3.05□□□□□ -1.92
KDM3B-204ENST00000507996 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
KDM3B-204ENST00000507996 LRP2P98164 4655 aa3.04□□□□□ -1.92
KDM3B-204ENST00000507996 KRTAP19-1Q8IUB9 90 aa3.04□□□□□ -1.92
KDM3B-204ENST00000507996 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
KDM3B-204ENST00000507996 M0QZ58 72 aa3□□□□□ -1.93
KDM3B-204ENST00000507996 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
KDM3B-204ENST00000507996 KRTAP9-6A0A140TA67 174 aa2.98□□□□□ -1.93
KDM3B-204ENST00000507996 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
KDM3B-204ENST00000507996 CAMK2N1Q7Z7J9 78 aa2.97□□□□□ -1.93
KDM3B-204ENST00000507996 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
KDM3B-204ENST00000507996 MUC2Q02817 5179 aa2.95□□□□□ -1.94
KDM3B-204ENST00000507996 KRTAP4-8Q9BYQ9 185 aa2.95□□□□□ -1.94
KDM3B-204ENST00000507996 RNF213Q63HN8 5207 aa2.93□□□□□ -1.94
KDM3B-204ENST00000507996 PP632Q6XCG6 107 aa2.93□□□□□ -1.94
KDM3B-204ENST00000507996 UBR4Q5T4S7 5183 aa2.93□□□□□ -1.94
KDM3B-204ENST00000507996 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
KDM3B-204ENST00000507996 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.94
KDM3B-204ENST00000507996 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.94
KDM3B-204ENST00000507996 KRTAP9-2Q9BYQ4 174 aa2.9□□□□□ -1.95
KDM3B-204ENST00000507996 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.89□□□□□ -1.95
KDM3B-204ENST00000507996 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
KDM3B-204ENST00000507996 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
KDM3B-204ENST00000507996 MUC17Q685J3 4493 aa2.87□□□□□ -1.95
KDM3B-204ENST00000507996 LCE3BQ5TA77 95 aa2.83□□□□□ -1.96
KDM3B-204ENST00000507996 KRTAP9-3Q9BYQ3 159 aa2.82□□□□□ -1.96
KDM3B-204ENST00000507996 INE1O15225 51 aa2.82□□□□□ -1.96
KDM3B-204ENST00000507996 FAT4Q6V0I7 4981 aa2.81□□□□□ -1.96
KDM3B-204ENST00000507996 M0R2T5 61 aa2.79□□□□□ -1.96
KDM3B-204ENST00000507996 KRTAP19-2Q3LHN2 52 aa2.76□□□□□ -1.97
KDM3B-204ENST00000507996 R4GN34 69 aa2.75□□□□□ -1.97
KDM3B-204ENST00000507996 FSIP2Q5CZC0 6907 aa2.74□□□□□ -1.97
KDM3B-204ENST00000507996 MT1HP80294 61 aa2.7□□□□□ -1.98
KDM3B-204ENST00000507996 FLGP20930 4061 aaPredicted RBP2.7□□□□□ -1.98
KDM3B-204ENST00000507996 LCE5AQ5TCM9 118 aa2.69□□□□□ -1.98
KDM3B-204ENST00000507996 LCE1DQ5T752 114 aa2.64□□□□□ -1.99
KDM3B-204ENST00000507996 TNP1P09430 55 aa2.64□□□□□ -1.99
KDM3B-204ENST00000507996 KRTAP4-8A0A0G2JLE6 195 aa2.63□□□□□ -1.99
KDM3B-204ENST00000507996 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
KDM3B-204ENST00000507996 MT2AP02795 61 aa2.58□□□□□ -2
KDM3B-204ENST00000507996 KRTAP9-8Q9BYQ0 159 aa2.58□□□□□ -2
KDM3B-204ENST00000507996 MT1FP04733 61 aa2.58□□□□□ -2
KDM3B-204ENST00000507996 KRTAP4-9Q9BYQ8 210 aa2.53□□□□□ -2
KDM3B-204ENST00000507996 KRTAP4-7Q9BYR0 210 aa2.51□□□□□ -2.01
KDM3B-204ENST00000507996 USH2AO75445 5202 aa2.5□□□□□ -2.01
KDM3B-204ENST00000507996 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
KDM3B-204ENST00000507996 SPRR2GQ9BYE4 73 aa2.48□□□□□ -2.01
KDM3B-204ENST00000507996 KRTAP8-1Q8IUC2 63 aa2.46□□□□□ -2.02
KDM3B-204ENST00000507996 LCE3AQ5TA76 89 aa2.45□□□□□ -2.02
KDM3B-204ENST00000507996 LCE1AQ5T7P2 110 aa2.44□□□□□ -2.02
KDM3B-204ENST00000507996 KRTAP10-12P60413 245 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms